RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 CHMP3Q9Y3E7 222 aa12.47□□□□□ -0.41
HDAC6-226ENST00000483656 RGPD3A6NKT7 1758 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-226ENST00000483656 RGPD4Q7Z3J3 1758 aa12.47□□□□□ -0.41
HDAC6-226ENST00000483656 COL24A1Q17RW2 1714 aa12.46□□□□□ -0.41
HDAC6-226ENST00000483656 DDX60Q8IY21 1712 aaKnown RBP12.46□□□□□ -0.41
HDAC6-226ENST00000483656 GYS1P13807 737 aa12.46□□□□□ -0.41
HDAC6-226ENST00000483656 EZH2Q15910 746 aaKnown RBP12.46□□□□□ -0.41
HDAC6-226ENST00000483656 ERFEQ4G0M1 354 aa12.46□□□□□ -0.41
HDAC6-226ENST00000483656 BMP2KLQ5H9B9 411 aa12.46□□□□□ -0.41
HDAC6-226ENST00000483656 SLC10A5Q5PT55 438 aa12.46□□□□□ -0.41
HDAC6-226ENST00000483656 TTC22Q5TAA0 569 aa12.46□□□□□ -0.41
HDAC6-226ENST00000483656 PUS3Q9BZE2 481 aaKnown RBP12.46□□□□□ -0.41
HDAC6-226ENST00000483656 GREM2Q9H772 168 aa12.46□□□□□ -0.41
HDAC6-226ENST00000483656 EYA2O00167 538 aa12.45□□□□□ -0.42
HDAC6-226ENST00000483656 HMGB2P26583 209 aaKnown RBP12.45□□□□□ -0.42
HDAC6-226ENST00000483656 EN1Q05925 392 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-226ENST00000483656 NFIXQ14938 502 aa12.45□□□□□ -0.42
HDAC6-226ENST00000483656 LRRC24Q50LG9 513 aa12.45□□□□□ -0.42
HDAC6-226ENST00000483656 C3orf67Q6ZVT6 689 aa12.45□□□□□ -0.42
HDAC6-226ENST00000483656 EAF2Q96CJ1 260 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-226ENST00000483656 SETDB2Q96T68 719 aa12.45□□□□□ -0.42
HDAC6-226ENST00000483656 ABCC12Q96J65 1359 aa12.44□□□□□ -0.42
HDAC6-226ENST00000483656 LAMB2P55268 1798 aa12.44□□□□□ -0.42
HDAC6-226ENST00000483656 CIAO1O76071 339 aa12.44□□□□□ -0.42
HDAC6-226ENST00000483656 MX1P20591 662 aa12.44□□□□□ -0.42
HDAC6-226ENST00000483656 ITGA6P23229 1130 aa12.44□□□□□ -0.42
HDAC6-226ENST00000483656 TM4SF1P30408 202 aa12.44□□□□□ -0.42
HDAC6-226ENST00000483656 TFCP2Q12800 502 aa12.44□□□□□ -0.42
HDAC6-226ENST00000483656 CCDC57Q2TAC2 916 aa12.44□□□□□ -0.42
HDAC6-226ENST00000483656 TSHZ3Q63HK5 1081 aa12.44□□□□□ -0.42
HDAC6-226ENST00000483656 COL23A1Q86Y22 540 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-226ENST00000483656 TUBGCP6Q96RT7 1819 aa12.44□□□□□ -0.42
HDAC6-226ENST00000483656 MYH3P11055 1940 aa12.43□□□□□ -0.42
HDAC6-226ENST00000483656 SEC24BO95487 1268 aa12.43□□□□□ -0.42
HDAC6-226ENST00000483656 IL15P40933 162 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-226ENST00000483656 IFIT5Q13325 482 aaKnown RBP12.43□□□□□ -0.42
HDAC6-226ENST00000483656 CLASRPQ8N2M8 674 aaKnown RBP12.43□□□□□ -0.42
HDAC6-226ENST00000483656 RBM19Q9Y4C8 960 aaKnown RBP12.43□□□□□ -0.42
HDAC6-226ENST00000483656 RTL9Q8NET4 1388 aa12.43□□□□□ -0.42
HDAC6-226ENST00000483656 AOX1Q06278 1338 aa12.42□□□□□ -0.42
HDAC6-226ENST00000483656 ANKRD18BA2A2Z9 1011 aa12.42□□□□□ -0.42
HDAC6-226ENST00000483656 SF3B3Q15393 1217 aaKnown RBP12.42□□□□□ -0.42
HDAC6-226ENST00000483656 TNNI3KQ59H18 835 aa12.42□□□□□ -0.42
HDAC6-226ENST00000483656 AACSQ86V21 672 aa12.42□□□□□ -0.42
HDAC6-226ENST00000483656 NBPF5PQ86XG9 351 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-226ENST00000483656 PI4K2BQ8TCG2 481 aa12.42□□□□□ -0.42
HDAC6-226ENST00000483656 NYXQ9GZU5 481 aa12.42□□□□□ -0.42
HDAC6-226ENST00000483656 CCDC8Q9H0W5 538 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-226ENST00000483656 ANO8Q9HCE9 1232 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-226ENST00000483656 SEC31BQ9NQW1 1179 aa12.42□□□□□ -0.42
HDAC6-226ENST00000483656 TLR7Q9NYK1 1049 aaKnown RBP12.42□□□□□ -0.42
HDAC6-226ENST00000483656 TFCP2L1Q9NZI6 479 aa12.42□□□□□ -0.42
HDAC6-226ENST00000483656 FBXO3Q9UK99 471 aa12.42□□□□□ -0.42
HDAC6-226ENST00000483656 RIPOR2Q9Y4F9 1068 aa12.42□□□□□ -0.42
HDAC6-226ENST00000483656 FPGT-TNNI3KV9GXZ4 949 aa12.42□□□□□ -0.42
HDAC6-226ENST00000483656 COL4A1P02462 1669 aa12.42□□□□□ -0.42
HDAC6-226ENST00000483656 PNPLA7Q6ZV29 1317 aa12.41□□□□□ -0.42
HDAC6-226ENST00000483656 LRP5O75197 1615 aa12.41□□□□□ -0.42
HDAC6-226ENST00000483656 HSP90B1P14625 803 aaKnown RBP12.41□□□□□ -0.42
HDAC6-226ENST00000483656 SDSP20132 328 aa12.41□□□□□ -0.42
HDAC6-226ENST00000483656 DDR1Q08345 913 aa12.41□□□□□ -0.42
HDAC6-226ENST00000483656 TPTE2Q6XPS3 522 aa12.41□□□□□ -0.42
HDAC6-226ENST00000483656 DEFB132Q7Z7B7 95 aa12.41□□□□□ -0.42
HDAC6-226ENST00000483656 CCDC24Q8N4L8 307 aa12.41□□□□□ -0.42
HDAC6-226ENST00000483656 GPR108Q9NPR9 543 aa12.41□□□□□ -0.42
HDAC6-226ENST00000483656 CARMIL3Q8ND23 1372 aa12.41□□□□□ -0.42
HDAC6-226ENST00000483656 RIC1Q4ADV7 1423 aa12.4□□□□□ -0.42
HDAC6-226ENST00000483656 IFIT2P09913 472 aaKnown RBP12.4□□□□□ -0.42
HDAC6-226ENST00000483656 CCDC152Q4G0S7 254 aa12.4□□□□□ -0.42
HDAC6-226ENST00000483656 TAF7LQ5H9L4 462 aa12.4□□□□□ -0.42
HDAC6-226ENST00000483656 TTC41PQ6P2S7 1318 aa12.39□□□□□ -0.43
HDAC6-226ENST00000483656 POLRMTO00411 1230 aaKnown RBP12.39□□□□□ -0.43
HDAC6-226ENST00000483656 GTF2E1P29083 439 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-226ENST00000483656 SLC15A2Q16348 729 aa12.39□□□□□ -0.43
HDAC6-226ENST00000483656 PRR5LQ6MZQ0 368 aa12.39□□□□□ -0.43
HDAC6-226ENST00000483656 LDHAL6AQ6ZMR3 332 aa12.39□□□□□ -0.43
HDAC6-226ENST00000483656 FLAD1Q8NFF5 587 aa12.39□□□□□ -0.43
HDAC6-226ENST00000483656 ECHDC1Q9NTX5 307 aa12.39□□□□□ -0.43
HDAC6-226ENST00000483656 DBNLQ9UJU6 430 aaKnown RBP12.39□□□□□ -0.43
HDAC6-226ENST00000483656 SERPINB2P05120 415 aa12.38□□□□□ -0.43
HDAC6-226ENST00000483656 BAG6P46379 1132 aa12.38□□□□□ -0.43
HDAC6-226ENST00000483656 TIMM10P62072 90 aa12.38□□□□□ -0.43
HDAC6-226ENST00000483656 TBC1D9Q6ZT07 1266 aa12.38□□□□□ -0.43
HDAC6-226ENST00000483656 VGLL2Q8N8G2 317 aa12.38□□□□□ -0.43
HDAC6-226ENST00000483656 DBNDD2Q9BQY9 259 aa12.38□□□□□ -0.43
HDAC6-226ENST00000483656 CEP126Q9P2H0 1117 aa12.38□□□□□ -0.43
HDAC6-226ENST00000483656 TNRC6CQ9HCJ0 1690 aaKnown RBP12.38□□□□□ -0.43
HDAC6-226ENST00000483656 CASZ1Q86V15 1759 aa12.38□□□□□ -0.43
HDAC6-226ENST00000483656 ZNF609O15014 1411 aa12.37□□□□□ -0.43
HDAC6-226ENST00000483656 CDC45O75419 566 aa12.37□□□□□ -0.43
HDAC6-226ENST00000483656 GLRX3O76003 335 aaKnown RBP12.37□□□□□ -0.43
HDAC6-226ENST00000483656 SF3B2Q13435 895 aaKnown RBP12.37□□□□□ -0.43
HDAC6-226ENST00000483656 NLGN1Q8N2Q7 840 aa12.37□□□□□ -0.43
HDAC6-226ENST00000483656 CNBD1Q8NA66 436 aa12.37□□□□□ -0.43
HDAC6-226ENST00000483656 NLRP3Q96P20 1036 aa12.37□□□□□ -0.43
HDAC6-226ENST00000483656 CNNM1Q9NRU3 951 aa12.37□□□□□ -0.43
HDAC6-226ENST00000483656 STK32BQ9NY57 414 aa12.37□□□□□ -0.43
HDAC6-226ENST00000483656 A0A1B0GUL7 405 aa12.36□□□□□ -0.43
HDAC6-226ENST00000483656 MSH5O43196 834 aa12.36□□□□□ -0.43
HDAC6-226ENST00000483656 MAP4K4O95819 1239 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms