RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 SCNN1DP51172 638 aa25.25■■□□□ 1.63
R3HDM1-215ENST00000483021 MPNDQ8N594 471 aa25.25■■□□□ 1.63
R3HDM1-215ENST00000483021 MKRN1Q9UHC7 482 aaKnown RBP25.25■■□□□ 1.63
R3HDM1-215ENST00000483021 CNTROBQ8N137 903 aa25.24■■□□□ 1.63
R3HDM1-215ENST00000483021 GOLGA2Q08379 1002 aa25.23■■□□□ 1.63
R3HDM1-215ENST00000483021 TRIM28Q13263 835 aaKnown RBP25.23■■□□□ 1.63
R3HDM1-215ENST00000483021 CHMP4AQ9BY43 222 aa25.23■■□□□ 1.63
R3HDM1-215ENST00000483021 ZNRF3Q9ULT6 936 aa25.23■■□□□ 1.63
R3HDM1-215ENST00000483021 ATP5J2-PTCD1G3V325 749 aa25.22■■□□□ 1.63
R3HDM1-215ENST00000483021 MAP1SQ66K74 1059 aaPredicted RBP25.22■■□□□ 1.63
R3HDM1-215ENST00000483021 FAM89AQ96GI7 184 aa25.22■■□□□ 1.63
R3HDM1-215ENST00000483021 DUOX1Q9NRD9 1551 aa25.22■■□□□ 1.63
R3HDM1-215ENST00000483021 KIAA2012Q0VF49 1180 aa25.21■■□□□ 1.63
R3HDM1-215ENST00000483021 SF3B3Q15393 1217 aaKnown RBP25.21■■□□□ 1.63
R3HDM1-215ENST00000483021 USP50Q70EL3 339 aaPredicted RBP25.21■■□□□ 1.63
R3HDM1-215ENST00000483021 RIC3Q7Z5B4 369 aa25.21■■□□□ 1.63
R3HDM1-215ENST00000483021 EPS15P42566 896 aa25.2■■□□□ 1.62
R3HDM1-215ENST00000483021 COL13A1Q5TAT6 717 aaPredicted RBP25.2■■□□□ 1.62
R3HDM1-215ENST00000483021 TRPM7Q96QT4 1865 aa25.19■■□□□ 1.62
R3HDM1-215ENST00000483021 CDHR2Q9BYE9 1310 aa25.19■■□□□ 1.62
R3HDM1-215ENST00000483021 HSP90B1P14625 803 aaKnown RBP25.19■■□□□ 1.62
R3HDM1-215ENST00000483021 CXCL9Q07325 125 aa25.19■■□□□ 1.62
R3HDM1-215ENST00000483021 ZNF428Q96B54 188 aa25.19■■□□□ 1.62
R3HDM1-215ENST00000483021 ADARB2Q9NS39 739 aaKnown RBP25.18■■□□□ 1.62
R3HDM1-215ENST00000483021 GPRC5DQ9NZD1 345 aa25.18■■□□□ 1.62
R3HDM1-215ENST00000483021 ELL2O00472 640 aaPredicted RBP25.17■■□□□ 1.62
R3HDM1-215ENST00000483021 IRS4O14654 1257 aaPredicted RBP25.17■■□□□ 1.62
R3HDM1-215ENST00000483021 CIAPIN1Q6FI81 312 aa25.17■■□□□ 1.62
R3HDM1-215ENST00000483021 PHAXQ9H814 394 aaKnown RBP25.17■■□□□ 1.62
R3HDM1-215ENST00000483021 TNIP1Q15025 636 aa25.16■■□□□ 1.62
R3HDM1-215ENST00000483021 CCDC30Q5VVM6 783 aa25.16■■□□□ 1.62
R3HDM1-215ENST00000483021 DDX58O95786 925 aaKnown RBP25.15■■□□□ 1.62
R3HDM1-215ENST00000483021 RTL5Q5HYW3 569 aaPredicted RBP25.15■■□□□ 1.62
R3HDM1-215ENST00000483021 ZBTB38Q8NAP3 1195 aaPredicted RBP25.15■■□□□ 1.62
R3HDM1-215ENST00000483021 C8orf58Q8NAV2 365 aa25.15■■□□□ 1.62
R3HDM1-215ENST00000483021 CELF1Q92879 486 aaKnown RBP25.15■■□□□ 1.62
R3HDM1-215ENST00000483021 RASSF10A6NK89 507 aa25.14■■□□□ 1.62
R3HDM1-215ENST00000483021 CCDC191Q8NCU4 936 aa25.14■■□□□ 1.62
R3HDM1-215ENST00000483021 VEGFBP49765 207 aa25.13■■□□□ 1.61
R3HDM1-215ENST00000483021 GMPSP49915 693 aaPredicted RBP25.13■■□□□ 1.61
R3HDM1-215ENST00000483021 CCDC27Q2M243 656 aa25.13■■□□□ 1.61
R3HDM1-215ENST00000483021 TNS4Q8IZW8 715 aa25.13■■□□□ 1.61
R3HDM1-215ENST00000483021 MYD88Q99836 296 aa25.13■■□□□ 1.61
R3HDM1-215ENST00000483021 NSFL1CQ9UNZ2 370 aaKnown RBP25.13■■□□□ 1.61
R3HDM1-215ENST00000483021 COL4A1P02462 1669 aa25.13■■□□□ 1.61
R3HDM1-215ENST00000483021 RAD17O75943 681 aa25.12■■□□□ 1.61
R3HDM1-215ENST00000483021 WASHC4Q2M389 1173 aa25.12■■□□□ 1.61
R3HDM1-215ENST00000483021 BCL2L13Q9BXK5 485 aa25.12■■□□□ 1.61
R3HDM1-215ENST00000483021 ABT1Q9ULW3 272 aaKnown RBP25.12■■□□□ 1.61
R3HDM1-215ENST00000483021 DEFB115Q30KQ5 88 aa25.11■■□□□ 1.61
R3HDM1-215ENST00000483021 CWC25Q9NXE8 425 aaPredicted RBP25.11■■□□□ 1.61
R3HDM1-215ENST00000483021 MYH3P11055 1940 aa25.1■■□□□ 1.61
R3HDM1-215ENST00000483021 PCCAP05165 728 aaPredicted RBP25.1■■□□□ 1.61
R3HDM1-215ENST00000483021 RPS8P62241 208 aaKnown RBP25.1■■□□□ 1.61
R3HDM1-215ENST00000483021 EYA3Q99504 573 aa25.1■■□□□ 1.61
R3HDM1-215ENST00000483021 METTL22Q9BUU2 404 aaPredicted RBP25.1■■□□□ 1.61
R3HDM1-215ENST00000483021 YDJCA8MPS7 323 aa25.09■■□□□ 1.61
R3HDM1-215ENST00000483021 ZEB1P37275 1124 aaPredicted RBP25.09■■□□□ 1.61
R3HDM1-215ENST00000483021 AIDAQ96BJ3 306 aa25.09■■□□□ 1.61
R3HDM1-215ENST00000483021 THSD7BQ9C0I4 1608 aa25.08■■□□□ 1.61
R3HDM1-215ENST00000483021 C6orf229H3BNL8 230 aa25.08■■□□□ 1.61
R3HDM1-215ENST00000483021 GPSM2P81274 684 aa25.08■■□□□ 1.61
R3HDM1-215ENST00000483021 CCDC152Q4G0S7 254 aa25.08■■□□□ 1.61
R3HDM1-215ENST00000483021 CCDC184Q52MB2 194 aa25.08■■□□□ 1.61
R3HDM1-215ENST00000483021 STK31Q9BXU1 1019 aa25.08■■□□□ 1.61
R3HDM1-215ENST00000483021 PDE8AO60658 829 aa25.07■■□□□ 1.6
R3HDM1-215ENST00000483021 NCBP3Q53F19 620 aaKnown RBP25.07■■□□□ 1.6
R3HDM1-215ENST00000483021 TSPYL6Q8N831 410 aa25.07■■□□□ 1.6
R3HDM1-215ENST00000483021 ZC3H15Q8WU90 426 aaKnown RBP25.07■■□□□ 1.6
R3HDM1-215ENST00000483021 TSR2Q969E8 191 aaKnown RBP25.07■■□□□ 1.6
R3HDM1-215ENST00000483021 CACNA1FO60840 1977 aa25.07■■□□□ 1.6
R3HDM1-215ENST00000483021 WWC1Q8IX03 1113 aa25.06■■□□□ 1.6
R3HDM1-215ENST00000483021 POLLQ9UGP5 575 aa25.06■■□□□ 1.6
R3HDM1-215ENST00000483021 MAP3K2Q9Y2U5 619 aa25.06■■□□□ 1.6
R3HDM1-215ENST00000483021 IL16Q14005 1332 aa25.06■■□□□ 1.6
R3HDM1-215ENST00000483021 WDR33Q9C0J8 1336 aaKnown RBP25.06■■□□□ 1.6
R3HDM1-215ENST00000483021 H7C1D1 291 aa25.05■■□□□ 1.6
R3HDM1-215ENST00000483021 FOXN1O15353 648 aa25.05■■□□□ 1.6
R3HDM1-215ENST00000483021 KSR2Q6VAB6 950 aa25.05■■□□□ 1.6
R3HDM1-215ENST00000483021 TBC1D16Q8TBP0 767 aa25.05■■□□□ 1.6
R3HDM1-215ENST00000483021 DPF2Q92785 391 aa25.05■■□□□ 1.6
R3HDM1-215ENST00000483021 DBNDD1Q9H9R9 158 aa25.05■■□□□ 1.6
R3HDM1-215ENST00000483021 PODXL2Q9NZ53 605 aa25.05■■□□□ 1.6
R3HDM1-215ENST00000483021 PGAP2Q9UHJ9 254 aa25.05■■□□□ 1.6
R3HDM1-215ENST00000483021 CNOT7Q9UIV1 285 aaKnown RBP25.05■■□□□ 1.6
R3HDM1-215ENST00000483021 TRAF5O00463 557 aa25.04■■□□□ 1.6
R3HDM1-215ENST00000483021 RIMBP2O15034 1052 aa25.04■■□□□ 1.6
R3HDM1-215ENST00000483021 NEXNQ0ZGT2 675 aa25.04■■□□□ 1.6
R3HDM1-215ENST00000483021 SEC31BQ9NQW1 1179 aa25.04■■□□□ 1.6
R3HDM1-215ENST00000483021 PSMD14O00487 310 aa25.03■■□□□ 1.6
R3HDM1-215ENST00000483021 ECE2O60344 883 aa25.03■■□□□ 1.6
R3HDM1-215ENST00000483021 ECE1P42892 770 aa25.03■■□□□ 1.6
R3HDM1-215ENST00000483021 CTCFP49711 727 aaPredicted RBP25.03■■□□□ 1.6
R3HDM1-215ENST00000483021 FMR1Q06787 632 aaKnown RBP eCLIP25.03■■□□□ 1.61e-6■■■■■ 39.4
R3HDM1-215ENST00000483021 TWISTNBQ3B726 338 aaPredicted RBP25.03■■□□□ 1.6
R3HDM1-215ENST00000483021 MICALL2Q8IY33 904 aa25.03■■□□□ 1.6
R3HDM1-215ENST00000483021 WBP1LQ9NX94 342 aa25.03■■□□□ 1.6
R3HDM1-215ENST00000483021 PSME4Q14997 1843 aa25.02■■□□□ 1.6
R3HDM1-215ENST00000483021 PI4KAP2A4QPH2 592 aa25.02■■□□□ 1.6
R3HDM1-215ENST00000483021 RPS12P25398 132 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms