RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 DDX60Q8IY21 1712 aaKnown RBP17.73■□□□□ 0.43
VARS-225ENST00000482996 DDNO94850 711 aaPredicted RBP17.73■□□□□ 0.43
VARS-225ENST00000482996 IGKV5-2P06315 115 aa17.73■□□□□ 0.43
VARS-225ENST00000482996 HSPA6P17066 643 aa17.73■□□□□ 0.43
VARS-225ENST00000482996 DPP8Q6V1X1 898 aaPredicted RBP17.73■□□□□ 0.43
VARS-225ENST00000482996 LARGE2Q8N3Y3 721 aa17.73■□□□□ 0.43
VARS-225ENST00000482996 CACNA1FO60840 1977 aa17.73■□□□□ 0.43
VARS-225ENST00000482996 E9PSI1 815 aa17.72■□□□□ 0.43
VARS-225ENST00000482996 PDE8AO60658 829 aa17.72■□□□□ 0.43
VARS-225ENST00000482996 FSTL1Q12841 308 aa17.72■□□□□ 0.43
VARS-225ENST00000482996 CCDC152Q4G0S7 254 aa17.72■□□□□ 0.43
VARS-225ENST00000482996 MPNDQ8N594 471 aa17.72■□□□□ 0.43
VARS-225ENST00000482996 DNAAF4Q8WXU2 420 aa17.72■□□□□ 0.43
VARS-225ENST00000482996 VPS33BQ9H267 617 aa17.72■□□□□ 0.43
VARS-225ENST00000482996 CDHR2Q9BYE9 1310 aa17.72■□□□□ 0.43
VARS-225ENST00000482996 NEURL1BA8MQ27 555 aa17.71■□□□□ 0.43
VARS-225ENST00000482996 FZD9O00144 591 aa17.71■□□□□ 0.43
VARS-225ENST00000482996 PPIP5K2O43314 1243 aa17.71■□□□□ 0.43
VARS-225ENST00000482996 EIF6P56537 245 aaKnown RBP17.71■□□□□ 0.43
VARS-225ENST00000482996 SLC51AQ86UW1 340 aa17.71■□□□□ 0.43
VARS-225ENST00000482996 JARID2Q92833 1246 aaPredicted RBP17.71■□□□□ 0.43
VARS-225ENST00000482996 WDR90Q96KV7 1748 aa17.71■□□□□ 0.43
VARS-225ENST00000482996 IQCA1LA6NCM1 817 aa17.7■□□□□ 0.42
VARS-225ENST00000482996 CWF19L2Q2TBE0 894 aaKnown RBP17.7■□□□□ 0.42
VARS-225ENST00000482996 NIM1KQ8IY84 436 aa17.7■□□□□ 0.42
VARS-225ENST00000482996 SMC1BQ8NDV3 1235 aa17.7■□□□□ 0.42
VARS-225ENST00000482996 CELF1Q92879 486 aaKnown RBP17.7■□□□□ 0.42
VARS-225ENST00000482996 RTFDC1Q9BY42 306 aaPredicted RBP17.7■□□□□ 0.42
VARS-225ENST00000482996 ZNF541Q9H0D2 1346 aa17.7■□□□□ 0.42
VARS-225ENST00000482996 POTECB2RU33 542 aa17.69■□□□□ 0.42
VARS-225ENST00000482996 RPS8P62241 208 aaKnown RBP17.69■□□□□ 0.42
VARS-225ENST00000482996 LINS1Q8NG48 757 aa17.69■□□□□ 0.42
VARS-225ENST00000482996 L3MBTL3Q96JM7 780 aaPredicted RBP17.69■□□□□ 0.42
VARS-225ENST00000482996 AOC3Q16853 763 aa17.68■□□□□ 0.42
VARS-225ENST00000482996 DIEXFQ68CQ4 756 aaKnown RBP17.68■□□□□ 0.42
VARS-225ENST00000482996 CEP350Q5VT06 3117 aa17.67■□□□□ 0.42
VARS-225ENST00000482996 APLP1P51693 650 aa17.67■□□□□ 0.42
VARS-225ENST00000482996 CTSWP56202 376 aa17.67■□□□□ 0.42
VARS-225ENST00000482996 SLFN5Q08AF3 891 aa17.67■□□□□ 0.42
VARS-225ENST00000482996 GCKRQ14397 625 aa17.67■□□□□ 0.42
VARS-225ENST00000482996 UBE3BQ7Z3V4 1068 aa17.67■□□□□ 0.42
VARS-225ENST00000482996 GPC2Q8N158 579 aa17.67■□□□□ 0.42
VARS-225ENST00000482996 CCDC85AQ96PX6 553 aaPredicted RBP17.67■□□□□ 0.42
VARS-225ENST00000482996 SEC31BQ9NQW1 1179 aa17.67■□□□□ 0.42
VARS-225ENST00000482996 NSFL1CQ9UNZ2 370 aaKnown RBP17.67■□□□□ 0.42
VARS-225ENST00000482996 TAF1P21675 1872 aa17.67■□□□□ 0.42
VARS-225ENST00000482996 H7C1W4 665 aa17.66■□□□□ 0.42
VARS-225ENST00000482996 KIAA2012Q0VF49 1180 aa17.66■□□□□ 0.42
VARS-225ENST00000482996 HACL1Q9UJ83 578 aa17.66■□□□□ 0.42
VARS-225ENST00000482996 GJA3Q9Y6H8 435 aa17.66■□□□□ 0.42
VARS-225ENST00000482996 F6X3S4 739 aa17.65■□□□□ 0.42
VARS-225ENST00000482996 ANKRD18AQ8IVF6 992 aa17.65■□□□□ 0.42
VARS-225ENST00000482996 CDC5LQ99459 802 aaKnown RBP17.65■□□□□ 0.42
VARS-225ENST00000482996 ZNRF3Q9ULT6 936 aa17.65■□□□□ 0.42
VARS-225ENST00000482996 C6orf229H3BNL8 230 aa17.64■□□□□ 0.41
VARS-225ENST00000482996 TTLL11Q8NHH1 800 aa17.64■□□□□ 0.41
VARS-225ENST00000482996 TAF1DQ9H5J8 278 aaPredicted RBP17.64■□□□□ 0.41
VARS-225ENST00000482996 COL4A5P29400 1685 aa17.64■□□□□ 0.41
VARS-225ENST00000482996 LRRC37AA6NMS7 1700 aa17.64■□□□□ 0.41
VARS-225ENST00000482996 LMOD1P29536 600 aaPredicted RBP17.63■□□□□ 0.41
VARS-225ENST00000482996 GPSM2P81274 684 aa17.63■□□□□ 0.41
VARS-225ENST00000482996 BEND3Q5T5X7 828 aa17.63■□□□□ 0.41
VARS-225ENST00000482996 EYA3Q99504 573 aa17.63■□□□□ 0.41
VARS-225ENST00000482996 PLA2G12BQ9BX93 195 aa17.63■□□□□ 0.41
VARS-225ENST00000482996 SCN4AP35499 1836 aa17.63■□□□□ 0.41
VARS-225ENST00000482996 EPHX2P34913 555 aa17.62■□□□□ 0.41
VARS-225ENST00000482996 WASHC4Q2M389 1173 aa17.62■□□□□ 0.41
VARS-225ENST00000482996 CHADLQ6NUI6 762 aa17.62■□□□□ 0.41
VARS-225ENST00000482996 CDCA7LQ96GN5 454 aa17.62■□□□□ 0.41
VARS-225ENST00000482996 GREM2Q9H772 168 aa17.62■□□□□ 0.41
VARS-225ENST00000482996 ANKIB1Q9P2G1 1089 aa17.62■□□□□ 0.41
VARS-225ENST00000482996 RTL9Q8NET4 1388 aa17.62■□□□□ 0.41
VARS-225ENST00000482996 CASP7P55210 303 aa17.61■□□□□ 0.41
VARS-225ENST00000482996 EAPPQ56P03 285 aaPredicted RBP17.61■□□□□ 0.41
VARS-225ENST00000482996 SLC4A10Q6U841 1118 aa17.61■□□□□ 0.41
VARS-225ENST00000482996 PNMA8AQ86V59 439 aaPredicted RBP17.61■□□□□ 0.41
VARS-225ENST00000482996 LDHDQ86WU2 507 aa17.61■□□□□ 0.41
VARS-225ENST00000482996 MIER1Q8N108 512 aa17.61■□□□□ 0.41
VARS-225ENST00000482996 MRPL50Q8N5N7 158 aaKnown RBP17.61■□□□□ 0.41
VARS-225ENST00000482996 PODXL2Q9NZ53 605 aa17.61■□□□□ 0.41
VARS-225ENST00000482996 POLLQ9UGP5 575 aa17.61■□□□□ 0.41
VARS-225ENST00000482996 GGA1Q9UJY5 639 aa17.61■□□□□ 0.41
VARS-225ENST00000482996 ALDH1L1O75891 902 aa17.6■□□□□ 0.41
VARS-225ENST00000482996 CXCL9Q07325 125 aa17.6■□□□□ 0.41
VARS-225ENST00000482996 TNIP1Q15025 636 aa17.6■□□□□ 0.41
VARS-225ENST00000482996 IFFO2Q5TF58 517 aa17.6■□□□□ 0.41
VARS-225ENST00000482996 CIAPIN1Q6FI81 312 aa17.6■□□□□ 0.41
VARS-225ENST00000482996 TBC1D16Q8TBP0 767 aa17.6■□□□□ 0.41
VARS-225ENST00000482996 SRCIN1Q9C0H9 1055 aa17.6■□□□□ 0.41
VARS-225ENST00000482996 DUOX1Q9NRD9 1551 aa17.6■□□□□ 0.41
VARS-225ENST00000482996 COL4A1P02462 1669 aa17.6■□□□□ 0.41
VARS-225ENST00000482996 MYH3P11055 1940 aa17.59■□□□□ 0.41
VARS-225ENST00000482996 PTPRCP08575 1304 aa17.59■□□□□ 0.41
VARS-225ENST00000482996 XDHP47989 1333 aa17.59■□□□□ 0.41
VARS-225ENST00000482996 RIMBP2O15034 1052 aa17.59■□□□□ 0.41
VARS-225ENST00000482996 UFL1O94874 794 aa17.59■□□□□ 0.41
VARS-225ENST00000482996 CT47B1P0C2W7 299 aaPredicted RBP17.59■□□□□ 0.41
VARS-225ENST00000482996 IGHMBP2P38935 993 aaKnown RBP17.59■□□□□ 0.41
VARS-225ENST00000482996 TRMT2AQ8IZ69 625 aaKnown RBP17.59■□□□□ 0.41
VARS-225ENST00000482996 SSH1Q8WYL5 1049 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms