RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 GRM8O00222 908 aa26.45■■□□□ 1.82
SEC13-217ENST00000482647 GRIPAP1Q4V328 841 aa26.45■■□□□ 1.82
SEC13-217ENST00000482647 NFKBIEO00221 500 aa26.44■■□□□ 1.82
SEC13-217ENST00000482647 CTSWP56202 376 aa26.44■■□□□ 1.82
SEC13-217ENST00000482647 PLA2G12BQ9BX93 195 aa26.44■■□□□ 1.82
SEC13-217ENST00000482647 TAOK3Q9H2K8 898 aa26.44■■□□□ 1.82
SEC13-217ENST00000482647 ATP6V0A2Q9Y487 856 aa26.44■■□□□ 1.82
SEC13-217ENST00000482647 RASSF7Q02833 373 aa26.43■■□□□ 1.82
SEC13-217ENST00000482647 OLFM4Q6UX06 510 aa26.43■■□□□ 1.82
SEC13-217ENST00000482647 TMC4Q7Z404 712 aa26.43■■□□□ 1.82
SEC13-217ENST00000482647 LMNB1P20700 586 aa26.42■■□□□ 1.82
SEC13-217ENST00000482647 CCT4P50991 539 aaKnown RBP26.42■■□□□ 1.82
SEC13-217ENST00000482647 C9orf131Q5VYM1 1079 aa26.42■■□□□ 1.82
SEC13-217ENST00000482647 TTLL11Q8NHH1 800 aa26.42■■□□□ 1.82
SEC13-217ENST00000482647 FRAT1Q92837 279 aaPredicted RBP26.42■■□□□ 1.82
SEC13-217ENST00000482647 CCDC85AQ96PX6 553 aaPredicted RBP26.42■■□□□ 1.82
SEC13-217ENST00000482647 LTBP3Q9NS15 1303 aa26.41■■□□□ 1.82
SEC13-217ENST00000482647 SP8Q8IXZ3 490 aa26.41■■□□□ 1.82
SEC13-217ENST00000482647 DDX60Q8IY21 1712 aaKnown RBP26.41■■□□□ 1.82
SEC13-217ENST00000482647 RPS8P62241 208 aaKnown RBP26.4■■□□□ 1.82
SEC13-217ENST00000482647 CELF1Q92879 486 aaKnown RBP26.4■■□□□ 1.82
SEC13-217ENST00000482647 RNF181Q9P0P0 153 aa26.4■■□□□ 1.82
SEC13-217ENST00000482647 FKBP4Q02790 459 aaKnown RBP eCLIP26.39■■□□□ 1.82
SEC13-217ENST00000482647 YTHDC1Q96MU7 727 aaKnown RBP26.39■■□□□ 1.82
SEC13-217ENST00000482647 SEC31BQ9NQW1 1179 aa26.39■■□□□ 1.82
SEC13-217ENST00000482647 CHD4Q14839 1912 aa26.39■■□□□ 1.81
SEC13-217ENST00000482647 CSF1RP07333 972 aa26.38■■□□□ 1.81
SEC13-217ENST00000482647 ATF7IPQ6VMQ6 1270 aa26.38■■□□□ 1.81
SEC13-217ENST00000482647 UTYO14607 1347 aa26.38■■□□□ 1.81
SEC13-217ENST00000482647 NBPF7P0C2Y1 421 aaPredicted RBP26.37■■□□□ 1.81
SEC13-217ENST00000482647 ZKSCAN2Q63HK3 967 aa26.37■■□□□ 1.81
SEC13-217ENST00000482647 CDC5LQ99459 802 aaKnown RBP26.37■■□□□ 1.81
SEC13-217ENST00000482647 PSMD1Q99460 953 aa26.37■■□□□ 1.81
SEC13-217ENST00000482647 GREM2Q9H772 168 aa26.37■■□□□ 1.81
SEC13-217ENST00000482647 RTL9Q8NET4 1388 aa26.36■■□□□ 1.81
SEC13-217ENST00000482647 LAMB2P55268 1798 aa26.36■■□□□ 1.81
SEC13-217ENST00000482647 FOXO4P98177 505 aa26.36■■□□□ 1.81
SEC13-217ENST00000482647 ANKRD18AQ8IVF6 992 aa26.36■■□□□ 1.81
SEC13-217ENST00000482647 USP44Q9H0E7 712 aa26.36■■□□□ 1.81
SEC13-217ENST00000482647 TRIM27P14373 513 aa26.35■■□□□ 1.81
SEC13-217ENST00000482647 PRELPP51888 382 aa26.35■■□□□ 1.81
SEC13-217ENST00000482647 INTS3Q68E01 1043 aaKnown RBP26.34■■□□□ 1.81
SEC13-217ENST00000482647 MPNDQ8N594 471 aa26.34■■□□□ 1.81
SEC13-217ENST00000482647 DPP8Q6V1X1 898 aaPredicted RBP26.33■■□□□ 1.81
SEC13-217ENST00000482647 SLC51AQ86UW1 340 aa26.33■■□□□ 1.81
SEC13-217ENST00000482647 ZNF277Q9NRM2 450 aaPredicted RBP26.33■■□□□ 1.81
SEC13-217ENST00000482647 CACNA1SQ13698 1873 aa26.33■■□□□ 1.81
SEC13-217ENST00000482647 ITGA6P23229 1130 aa26.32■■□□□ 1.8
SEC13-217ENST00000482647 FAM161AQ3B820 660 aa26.32■■□□□ 1.8
SEC13-217ENST00000482647 EPHA10Q5JZY3 1008 aa26.32■■□□□ 1.8
SEC13-217ENST00000482647 LMBR1LQ6UX01 489 aa26.32■■□□□ 1.8
SEC13-217ENST00000482647 SUPT20HQ8NEM7 779 aa26.32■■□□□ 1.8
SEC13-217ENST00000482647 SUCLG2Q96I99 432 aa26.32■■□□□ 1.8
SEC13-217ENST00000482647 SNED1Q8TER0 1413 aa26.31■■□□□ 1.8
SEC13-217ENST00000482647 ANKRD18BA2A2Z9 1011 aa26.31■■□□□ 1.8
SEC13-217ENST00000482647 IFIT5Q13325 482 aaKnown RBP26.31■■□□□ 1.8
SEC13-217ENST00000482647 ZNF784Q8NCA9 323 aaPredicted RBP26.31■■□□□ 1.8
SEC13-217ENST00000482647 RCAN3Q9UKA8 241 aa26.31■■□□□ 1.8
SEC13-217ENST00000482647 CHMP3Q9Y3E7 222 aa26.31■■□□□ 1.8
SEC13-217ENST00000482647 ZC3H4Q9UPT8 1303 aaKnown RBP26.31■■□□□ 1.8
SEC13-217ENST00000482647 IGHMBP2P38935 993 aaKnown RBP26.3■■□□□ 1.8
SEC13-217ENST00000482647 CLUAP1Q96AJ1 413 aa26.3■■□□□ 1.8
SEC13-217ENST00000482647 KAZALD1Q96I82 304 aa26.3■■□□□ 1.8
SEC13-217ENST00000482647 RTFDC1Q9BY42 306 aaPredicted RBP26.3■■□□□ 1.8
SEC13-217ENST00000482647 BSDC1Q9NW68 430 aaPredicted RBP26.3■■□□□ 1.8
SEC13-217ENST00000482647 NSFL1CQ9UNZ2 370 aaKnown RBP26.3■■□□□ 1.8
SEC13-217ENST00000482647 HDAC5Q9UQL6 1122 aa26.3■■□□□ 1.8
SEC13-217ENST00000482647 FER1L6Q2WGJ9 1857 aa26.3■■□□□ 1.8
SEC13-217ENST00000482647 IARSP41252 1262 aaKnown RBP26.29■■□□□ 1.8
SEC13-217ENST00000482647 VPS33BQ9H267 617 aa26.29■■□□□ 1.8
SEC13-217ENST00000482647 CCDC57Q2TAC2 916 aa26.28■■□□□ 1.8
SEC13-217ENST00000482647 UBTFL1P0CB47 393 aaPredicted RBP26.27■■□□□ 1.8
SEC13-217ENST00000482647 GPSM2P81274 684 aa26.27■■□□□ 1.8
SEC13-217ENST00000482647 FTSJ3Q8IY81 847 aaKnown RBP26.27■■□□□ 1.8
SEC13-217ENST00000482647 MPHOSPH8Q99549 860 aa26.27■■□□□ 1.8
SEC13-217ENST00000482647 BICC1Q9H694 974 aaKnown RBP26.27■■□□□ 1.8
SEC13-217ENST00000482647 TNNQ9UQP3 1299 aa26.27■■□□□ 1.8
SEC13-217ENST00000482647 DZIP1LQ8IYY4 767 aaKnown RBP26.26■■□□□ 1.79
SEC13-217ENST00000482647 ANKIB1Q9P2G1 1089 aa26.26■■□□□ 1.79
SEC13-217ENST00000482647 RABL6Q3YEC7 729 aaPredicted RBP26.25■■□□□ 1.79
SEC13-217ENST00000482647 LARGE2Q8N3Y3 721 aa26.25■■□□□ 1.79
SEC13-217ENST00000482647 JDP2Q8WYK2 163 aa26.25■■□□□ 1.79
SEC13-217ENST00000482647 PODXL2Q9NZ53 605 aa26.25■■□□□ 1.79
SEC13-217ENST00000482647 TAF1P21675 1872 aa26.25■■□□□ 1.79
SEC13-217ENST00000482647 GNAI3P08754 354 aa26.24■■□□□ 1.79
SEC13-217ENST00000482647 TAF7LQ5H9L4 462 aa26.24■■□□□ 1.79
SEC13-217ENST00000482647 TMEM57Q8N5G2 664 aa26.24■■□□□ 1.79
SEC13-217ENST00000482647 ANKRD44Q8N8A2 993 aa26.24■■□□□ 1.79
SEC13-217ENST00000482647 ZNF526Q8TF50 670 aaPredicted RBP26.24■■□□□ 1.79
SEC13-217ENST00000482647 MINPP1Q9UNW1 487 aa26.24■■□□□ 1.79
SEC13-217ENST00000482647 COL4A1P02462 1669 aa26.24■■□□□ 1.79
SEC13-217ENST00000482647 SBF1O95248 1867 aa26.23■■□□□ 1.79
SEC13-217ENST00000482647 C6orf229H3BNL8 230 aa26.23■■□□□ 1.79
SEC13-217ENST00000482647 PPIP5K2O43314 1243 aa26.23■■□□□ 1.79
SEC13-217ENST00000482647 MS4A1P11836 297 aa26.23■■□□□ 1.79
SEC13-217ENST00000482647 GPBP1L1Q9HC44 474 aaPredicted RBP26.23■■□□□ 1.79
SEC13-217ENST00000482647 MYH3P11055 1940 aa26.22■■□□□ 1.79
SEC13-217ENST00000482647 KDM2BQ8NHM5 1336 aa26.22■■□□□ 1.79
SEC13-217ENST00000482647 DPY19L2Q6NUT2 758 aa26.22■■□□□ 1.79
SEC13-217ENST00000482647 TBC1D16Q8TBP0 767 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms