RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 TNNT3P45378 269 aaPredicted RBP8.56□□□□□ -1.04
PKP4-211ENST00000481115 GUCA2AQ02747 115 aa8.56□□□□□ -1.04
PKP4-211ENST00000481115 RABEP1Q15276 862 aa8.56□□□□□ -1.04
PKP4-211ENST00000481115 NBPF20Q3BBV1 942 aa8.56□□□□□ -1.04
PKP4-211ENST00000481115 TEX35Q5T0J7 233 aa8.56□□□□□ -1.04
PKP4-211ENST00000481115 LARP1Q6PKG0 1096 aaKnown RBP8.56□□□□□ -1.04
PKP4-211ENST00000481115 ZNF397Q8NF99 534 aaPredicted RBP8.56□□□□□ -1.04
PKP4-211ENST00000481115 RASSF4Q9H2L5 321 aa8.56□□□□□ -1.04
PKP4-211ENST00000481115 TSPY26PQ9H489 355 aa8.56□□□□□ -1.04
PKP4-211ENST00000481115 C14orf93Q9H972 538 aaKnown RBP8.56□□□□□ -1.04
PKP4-211ENST00000481115 SMC4Q9NTJ3 1288 aa8.56□□□□□ -1.04
PKP4-211ENST00000481115 RBM28Q9NW13 759 aaKnown RBP8.56□□□□□ -1.04
PKP4-211ENST00000481115 TBX22Q9Y458 520 aa8.56□□□□□ -1.04
PKP4-211ENST00000481115 KNDC1Q76NI1 1749 aa8.56□□□□□ -1.04
PKP4-211ENST00000481115 XRN1Q8IZH2 1706 aaKnown RBP8.56□□□□□ -1.04
PKP4-211ENST00000481115 PIK3R4Q99570 1358 aa8.56□□□□□ -1.04
PKP4-211ENST00000481115 CAPN2P17655 700 aa8.55□□□□□ -1.04
PKP4-211ENST00000481115 CALRP27797 417 aaKnown RBP8.55□□□□□ -1.04
PKP4-211ENST00000481115 CLCN6P51797 869 aa8.55□□□□□ -1.04
PKP4-211ENST00000481115 CRTC2Q53ET0 693 aaPredicted RBP8.55□□□□□ -1.04
PKP4-211ENST00000481115 NAALADL2Q58DX5 795 aa8.55□□□□□ -1.04
PKP4-211ENST00000481115 BMP2KLQ5H9B9 411 aa8.55□□□□□ -1.04
PKP4-211ENST00000481115 ICE2Q659A1 982 aa8.55□□□□□ -1.04
PKP4-211ENST00000481115 KIF18AQ8NI77 898 aa8.55□□□□□ -1.04
PKP4-211ENST00000481115 KIAA1524Q8TCG1 905 aa8.55□□□□□ -1.04
PKP4-211ENST00000481115 TATDN2Q93075 761 aa8.55□□□□□ -1.04
PKP4-211ENST00000481115 METP08581 1390 aa8.54□□□□□ -1.04
PKP4-211ENST00000481115 TRIM6-TRIM34B2RNG4 842 aa8.54□□□□□ -1.04
PKP4-211ENST00000481115 HTATSF1O43719 755 aaKnown RBP8.54□□□□□ -1.04
PKP4-211ENST00000481115 GUCY2CP25092 1073 aa8.54□□□□□ -1.04
PKP4-211ENST00000481115 U2AF2P26368 475 aaKnown RBP eCLIP8.54□□□□□ -1.041e-8■■■■■ 30.9
PKP4-211ENST00000481115 NOP2P46087 812 aaKnown RBP8.54□□□□□ -1.04
PKP4-211ENST00000481115 TRDNQ13061 729 aa8.54□□□□□ -1.04
PKP4-211ENST00000481115 PTK7Q13308 1070 aa8.54□□□□□ -1.04
PKP4-211ENST00000481115 FBXO33Q7Z6M2 555 aa8.54□□□□□ -1.04
PKP4-211ENST00000481115 KIF1BPQ96EK5 621 aa8.54□□□□□ -1.04
PKP4-211ENST00000481115 CARD10Q9BWT7 1032 aa8.54□□□□□ -1.04
PKP4-211ENST00000481115 PPP1R1BQ9UD71 204 aaPredicted RBP8.54□□□□□ -1.04
PKP4-211ENST00000481115 MKRN1Q9UHC7 482 aaKnown RBP8.54□□□□□ -1.04
PKP4-211ENST00000481115 TSKSQ9UJT2 592 aa8.54□□□□□ -1.04
PKP4-211ENST00000481115 PNMA3Q9UL41 463 aa8.54□□□□□ -1.04
PKP4-211ENST00000481115 ADAMTS8Q9UP79 889 aa8.54□□□□□ -1.04
PKP4-211ENST00000481115 PTPRUQ92729 1446 aa8.54□□□□□ -1.04
PKP4-211ENST00000481115 C6orf229H3BNL8 230 aa8.53□□□□□ -1.04
PKP4-211ENST00000481115 KIF2AO00139 706 aaPredicted RBP8.53□□□□□ -1.04
PKP4-211ENST00000481115 RECKO95980 971 aa8.53□□□□□ -1.04
PKP4-211ENST00000481115 LMOD3Q0VAK6 560 aa8.53□□□□□ -1.04
PKP4-211ENST00000481115 GPS2Q13227 327 aa8.53□□□□□ -1.04
PKP4-211ENST00000481115 BMS1Q14692 1282 aaKnown RBP8.53□□□□□ -1.04
PKP4-211ENST00000481115 SWT1Q5T5J6 900 aaKnown RBP8.53□□□□□ -1.04
PKP4-211ENST00000481115 C3orf67Q6ZVT6 689 aa8.53□□□□□ -1.04
PKP4-211ENST00000481115 C1orf216Q8TAB5 229 aa8.53□□□□□ -1.04
PKP4-211ENST00000481115 HLA-CQ95604 372 aa8.53□□□□□ -1.04
PKP4-211ENST00000481115 RAI14Q9P0K7 980 aa8.53□□□□□ -1.04
PKP4-211ENST00000481115 CEP83Q9Y592 693 aa8.53□□□□□ -1.04
PKP4-211ENST00000481115 LTBP4Q8N2S1 1624 aa8.53□□□□□ -1.04
PKP4-211ENST00000481115 TECPR2O15040 1411 aa8.53□□□□□ -1.04
PKP4-211ENST00000481115 ARHGEF28Q8N1W1 1705 aaKnown RBP8.52□□□□□ -1.05
PKP4-211ENST00000481115 ST20-MTHFSA0A0A6YYL1 179 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 C3orf80F5H4A9 247 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 ATP5J2-PTCD1G3V325 749 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 CCDC172P0C7W6 258 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 C7P10643 843 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 RASA1P20936 1047 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 CASQ1P31415 396 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 MCM2P49736 904 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 GTF2A1P52655 376 aaPredicted RBP8.52□□□□□ -1.05
PKP4-211ENST00000481115 TPM4P67936 248 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 SATB1Q01826 763 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 NCBP1Q09161 790 aaKnown RBP8.52□□□□□ -1.05
PKP4-211ENST00000481115 HSP90AB3PQ58FF7 597 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 WDR63Q8IWG1 891 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 IQUBQ8NA54 791 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 PSD3Q9NYI0 1048 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 EGFL7Q9UHF1 273 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 KNSTRNQ9Y448 316 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 CPS1P31327 1500 aa8.52□□□□□ -1.05
PKP4-211ENST00000481115 YTHDC2Q9H6S0 1430 aaKnown RBP8.52□□□□□ -1.05
PKP4-211ENST00000481115 XIRP1Q702N8 1843 aaKnown RBP8.52□□□□□ -1.05
PKP4-211ENST00000481115 ABCC11Q96J66 1382 aa8.51□□□□□ -1.05
PKP4-211ENST00000481115 DLC1Q96QB1 1528 aa8.51□□□□□ -1.05
PKP4-211ENST00000481115 KCNA6P17658 529 aa8.51□□□□□ -1.05
PKP4-211ENST00000481115 COL9A1P20849 921 aa8.51□□□□□ -1.05
PKP4-211ENST00000481115 DHX8Q14562 1220 aaKnown RBP8.51□□□□□ -1.05
PKP4-211ENST00000481115 SWI5Q1ZZU3 235 aa8.51□□□□□ -1.05
PKP4-211ENST00000481115 PACS2Q86VP3 889 aa8.51□□□□□ -1.05
PKP4-211ENST00000481115 ANKMY2Q8IV38 441 aa8.51□□□□□ -1.05
PKP4-211ENST00000481115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.51□□□□□ -1.05
PKP4-211ENST00000481115 DEPDC4Q8N2C3 294 aa8.51□□□□□ -1.05
PKP4-211ENST00000481115 OTUD5Q96G74 571 aa8.51□□□□□ -1.05
PKP4-211ENST00000481115 MED4Q9NPJ6 270 aa8.51□□□□□ -1.05
PKP4-211ENST00000481115 KCND1Q9NSA2 647 aa8.51□□□□□ -1.05
PKP4-211ENST00000481115 PTCH1Q13635 1447 aa8.51□□□□□ -1.05
PKP4-211ENST00000481115 ZBBXA8MT70 800 aa8.5□□□□□ -1.05
PKP4-211ENST00000481115 DHX16O60231 1041 aaKnown RBP8.5□□□□□ -1.05
PKP4-211ENST00000481115 NEMFO60524 1076 aa8.5□□□□□ -1.05
PKP4-211ENST00000481115 FBXO45P0C2W1 286 aa8.5□□□□□ -1.05
PKP4-211ENST00000481115 MVPQ14764 893 aaKnown RBP8.5□□□□□ -1.05
PKP4-211ENST00000481115 TMEM132EQ6IEE7 984 aa8.5□□□□□ -1.05
PKP4-211ENST00000481115 CCDC91Q7Z6B0 441 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms