RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 DRC7Q8IY82 874 aa11.98□□□□□ -0.49
PRPF4B-206ENST00000481109 OR8K1Q8NGG5 319 aa11.98□□□□□ -0.49
PRPF4B-206ENST00000481109 PHLPP2Q6ZVD8 1323 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 CCDC151A5D8V7 595 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 ANKRD65E5RJM6 399 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 PYGLP06737 847 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 PAX3P23760 479 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 HNRNPLLQ8WVV9 542 aaKnown RBP11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 TBC1D5Q92609 795 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 EZH1Q92800 747 aaPredicted RBP11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 INTS4Q96HW7 963 aaKnown RBP11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 STK31Q9BXU1 1019 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 DNAJC5Q9H3Z4 198 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 TTC41PQ6P2S7 1318 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 AHCYL1O43865 530 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 FSBPO95073 299 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 NAP1L1P55209 391 aaKnown RBP11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 SFSWAPQ12872 951 aaKnown RBP11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 SNW1Q13573 536 aaKnown RBP11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 IQCB1Q15051 598 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 BRD3Q15059 726 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 MFN1Q8IWA4 741 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 CEP112Q8N8E3 955 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 FAM71BQ8TC56 605 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 ATP6V0A4Q9HBG4 840 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 NRBP1Q9UHY1 535 aa11.97□□□□□ -0.49
PRPF4B-206ENST00000481109 CLTCL1P53675 1640 aa11.96□□□□□ -0.49
PRPF4B-206ENST00000481109 GPATCH8Q9UKJ3 1502 aaKnown RBP11.96□□□□□ -0.49
PRPF4B-206ENST00000481109 INPP5BP32019 993 aa11.96□□□□□ -0.49
PRPF4B-206ENST00000481109 MCM2P49736 904 aa11.96□□□□□ -0.49
PRPF4B-206ENST00000481109 SNX1Q13596 522 aa11.96□□□□□ -0.49
PRPF4B-206ENST00000481109 ZBTB10Q96DT7 871 aa11.96□□□□□ -0.49
PRPF4B-206ENST00000481109 JPH4Q96JJ6 628 aa11.96□□□□□ -0.49
PRPF4B-206ENST00000481109 CHAMP1Q96JM3 812 aa11.96□□□□□ -0.49
PRPF4B-206ENST00000481109 FAM169AQ9Y6X4 670 aa11.96□□□□□ -0.49
PRPF4B-206ENST00000481109 TROQ12816 1431 aaPredicted RBP11.96□□□□□ -0.49
PRPF4B-206ENST00000481109 ARHGEF12Q9NZN5 1544 aa11.96□□□□□ -0.5
PRPF4B-206ENST00000481109 CDC45O75419 566 aa11.96□□□□□ -0.5
PRPF4B-206ENST00000481109 FMNL1O95466 1100 aaPredicted RBP11.96□□□□□ -0.5
PRPF4B-206ENST00000481109 FESP07332 822 aa11.96□□□□□ -0.5
PRPF4B-206ENST00000481109 PYGBP11216 843 aa11.96□□□□□ -0.5
PRPF4B-206ENST00000481109 FNTAP49354 379 aa11.96□□□□□ -0.5
PRPF4B-206ENST00000481109 FOXD4L6Q3SYB3 417 aaPredicted RBP11.96□□□□□ -0.5
PRPF4B-206ENST00000481109 FOXD4L3Q6VB84 417 aaPredicted RBP11.96□□□□□ -0.5
PRPF4B-206ENST00000481109 LRRN4CLQ8ND94 238 aa11.96□□□□□ -0.5
PRPF4B-206ENST00000481109 C17orf50Q8WW18 174 aa11.96□□□□□ -0.5
PRPF4B-206ENST00000481109 PIK3C2GO75747 1445 aa11.95□□□□□ -0.5
PRPF4B-206ENST00000481109 PSDA5PKW4 1024 aaPredicted RBP11.95□□□□□ -0.5
PRPF4B-206ENST00000481109 ECM2O94769 699 aaPredicted RBP11.95□□□□□ -0.5
PRPF4B-206ENST00000481109 LRRFIP1Q32MZ4 808 aaKnown RBP11.95□□□□□ -0.5
PRPF4B-206ENST00000481109 TDRD7Q8NHU6 1098 aaKnown RBP11.95□□□□□ -0.5
PRPF4B-206ENST00000481109 FAM163AQ96GL9 167 aaPredicted RBP11.95□□□□□ -0.5
PRPF4B-206ENST00000481109 RGL1Q9NZL6 768 aa11.95□□□□□ -0.5
PRPF4B-206ENST00000481109 EBAG9O00559 213 aa11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 MAP3K9P80192 1104 aa11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 CUL4AQ13619 759 aa11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 LAMB3Q13751 1172 aa11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 LONRF2Q1L5Z9 754 aa11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 BRAPQ7Z569 592 aa11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 TRIM42Q8IWZ5 723 aa11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 SPDYE1Q8NFV5 336 aaPredicted RBP11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 ATL2Q8NHH9 583 aa11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 MRFAP1L1Q96HT8 127 aa11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 ARPC5LQ9BPX5 153 aa11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 UBA5Q9GZZ9 404 aa11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 DNAI1Q9UI46 699 aa11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 CCDC141Q6ZP82 1450 aa11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 EIF4G3O43432 1585 aaKnown RBP11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 RPAP1Q9BWH6 1393 aaPredicted RBP11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 CCDC50Q8IVM0 306 aa11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 CNNM3Q8NE01 707 aa11.94□□□□□ -0.5
PRPF4B-206ENST00000481109 PDLIM1O00151 329 aa11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 SMARCA5O60264 1052 aaPredicted RBP11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 TPP2P29144 1249 aaPredicted RBP11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 CCZ1BP86790 482 aa11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 CCZ1P86791 482 aaPredicted RBP11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 SARM1Q6SZW1 724 aa11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 CHD1LQ86WJ1 897 aa11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 FAM81AQ8TBF8 368 aa11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 RABGGTAQ92696 567 aa11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 BICD1Q96G01 975 aa11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 TRIM5Q9C035 493 aa11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 CWC25Q9NXE8 425 aaPredicted RBP11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 SYNPO2Q9UMS6 1093 aa11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 WDR33Q9C0J8 1336 aaKnown RBP11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 NBPF7P0C2Y1 421 aaPredicted RBP11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 DHX8Q14562 1220 aaKnown RBP11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 ACBD5Q5T8D3 534 aaPredicted RBP11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 MYSM1Q5VVJ2 828 aa11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 HDXQ7Z353 690 aa11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 SPATS2Q86XZ4 545 aaKnown RBP11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 B4GALNT2Q8NHY0 566 aa11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 OSBPL9Q96SU4 736 aa11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 CD248Q9HCU0 757 aa11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 SYNRGQ9UMZ2 1314 aa11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 CEP170Q5SW79 1584 aa11.93□□□□□ -0.5
PRPF4B-206ENST00000481109 OPA1O60313 960 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 CAVIN2O95810 425 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 EZRP15311 586 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms