RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 PPEF1O14829 653 aaPredicted RBP11.64□□□□□ -0.55
VCP-206ENST00000480327 CC2D2BQ6DHV5 1058 aa11.64□□□□□ -0.55
VCP-206ENST00000480327 PNMA8AQ86V59 439 aaPredicted RBP11.64□□□□□ -0.55
VCP-206ENST00000480327 RPGRQ92834 1020 aaKnown RBP11.64□□□□□ -0.55
VCP-206ENST00000480327 CHPF2Q9P2E5 772 aa11.64□□□□□ -0.55
VCP-206ENST00000480327 GJA3Q9Y6H8 435 aa11.64□□□□□ -0.55
VCP-206ENST00000480327 ERBB4Q15303 1308 aa11.63□□□□□ -0.55
VCP-206ENST00000480327 VAMP4O75379 141 aa11.63□□□□□ -0.55
VCP-206ENST00000480327 HOXB7P09629 217 aa11.63□□□□□ -0.55
VCP-206ENST00000480327 SLC10A5Q5PT55 438 aa11.63□□□□□ -0.55
VCP-206ENST00000480327 TRMT2AQ8IZ69 625 aaKnown RBP11.63□□□□□ -0.55
VCP-206ENST00000480327 JDP2Q8WYK2 163 aa11.63□□□□□ -0.55
VCP-206ENST00000480327 PRDM10Q9NQV6 1147 aa11.63□□□□□ -0.55
VCP-206ENST00000480327 ABCC4O15439 1325 aa11.62□□□□□ -0.55
VCP-206ENST00000480327 TRAF5O00463 557 aa11.62□□□□□ -0.55
VCP-206ENST00000480327 HSPA8P11142 646 aaKnown RBP11.62□□□□□ -0.55
VCP-206ENST00000480327 EIF6P56537 245 aaKnown RBP11.62□□□□□ -0.55
VCP-206ENST00000480327 AIMP1Q12904 312 aaKnown RBP11.62□□□□□ -0.55
VCP-206ENST00000480327 DEFB115Q30KQ5 88 aa11.62□□□□□ -0.55
VCP-206ENST00000480327 CST9Q5W186 159 aa11.62□□□□□ -0.55
VCP-206ENST00000480327 LARGE2Q8N3Y3 721 aa11.62□□□□□ -0.55
VCP-206ENST00000480327 RBM17Q96I25 401 aaKnown RBP11.62□□□□□ -0.55
VCP-206ENST00000480327 DDX21Q9NR30 783 aaKnown RBP eCLIP11.62□□□□□ -0.55
VCP-206ENST00000480327 WDR33Q9C0J8 1336 aaKnown RBP11.61□□□□□ -0.55
VCP-206ENST00000480327 LBX1P52954 281 aa11.61□□□□□ -0.55
VCP-206ENST00000480327 AOC3Q16853 763 aa11.61□□□□□ -0.55
VCP-206ENST00000480327 CCDC30Q5VVM6 783 aa11.61□□□□□ -0.55
VCP-206ENST00000480327 RTFDC1Q9BY42 306 aaPredicted RBP11.61□□□□□ -0.55
VCP-206ENST00000480327 DBF4Q9UBU7 674 aaPredicted RBP11.61□□□□□ -0.55
VCP-206ENST00000480327 ATP6V0A2Q9Y487 856 aa11.61□□□□□ -0.55
VCP-206ENST00000480327 SCN9AQ15858 1988 aa11.61□□□□□ -0.55
VCP-206ENST00000480327 PPIP5K2O43314 1243 aa11.6□□□□□ -0.55
VCP-206ENST00000480327 CTCFP49711 727 aaPredicted RBP11.6□□□□□ -0.55
VCP-206ENST00000480327 CXCL9Q07325 125 aa11.6□□□□□ -0.55
VCP-206ENST00000480327 PARP10Q53GL7 1025 aa11.6□□□□□ -0.55
VCP-206ENST00000480327 PPP1R42Q7Z4L9 355 aa11.6□□□□□ -0.55
VCP-206ENST00000480327 NLRP10Q86W26 655 aa11.6□□□□□ -0.55
VCP-206ENST00000480327 XAGE3Q8WTP9 111 aa11.6□□□□□ -0.55
VCP-206ENST00000480327 STK31Q9BXU1 1019 aa11.6□□□□□ -0.55
VCP-206ENST00000480327 PHAXQ9H814 394 aaKnown RBP11.6□□□□□ -0.55
VCP-206ENST00000480327 CASP8AP2Q9UKL3 1982 aa11.59□□□□□ -0.55
VCP-206ENST00000480327 PSME4Q14997 1843 aa11.59□□□□□ -0.55
VCP-206ENST00000480327 SLC4A2P04920 1241 aa11.59□□□□□ -0.55
VCP-206ENST00000480327 HCLS1P14317 486 aaPredicted RBP11.59□□□□□ -0.55
VCP-206ENST00000480327 GRIPAP1Q4V328 841 aa11.59□□□□□ -0.55
VCP-206ENST00000480327 USP50Q70EL3 339 aaPredicted RBP11.59□□□□□ -0.55
VCP-206ENST00000480327 COPS6Q7L5N1 327 aa11.59□□□□□ -0.55
VCP-206ENST00000480327 ZNF428Q96B54 188 aa11.59□□□□□ -0.55
VCP-206ENST00000480327 NLRP3Q96P20 1036 aa11.59□□□□□ -0.55
VCP-206ENST00000480327 UTP14AQ9BVJ6 771 aaKnown RBP11.59□□□□□ -0.55
VCP-206ENST00000480327 BCL2L13Q9BXK5 485 aa11.59□□□□□ -0.55
VCP-206ENST00000480327 GPRC5DQ9NZD1 345 aa11.59□□□□□ -0.55
VCP-206ENST00000480327 SHTN1A0MZ66 631 aa11.58□□□□□ -0.56
VCP-206ENST00000480327 LMOD1P29536 600 aaPredicted RBP11.58□□□□□ -0.56
VCP-206ENST00000480327 HIRAP54198 1017 aaPredicted RBP11.58□□□□□ -0.56
VCP-206ENST00000480327 CYP4F22Q6NT55 531 aa11.58□□□□□ -0.56
VCP-206ENST00000480327 G2E3Q7L622 706 aa11.58□□□□□ -0.56
VCP-206ENST00000480327 NIM1KQ8IY84 436 aa11.58□□□□□ -0.56
VCP-206ENST00000480327 HYPKQ9NX55 129 aa11.58□□□□□ -0.56
VCP-206ENST00000480327 ABT1Q9ULW3 272 aaKnown RBP11.58□□□□□ -0.56
VCP-206ENST00000480327 ZNF646O15015 1829 aaPredicted RBP11.58□□□□□ -0.56
VCP-206ENST00000480327 TNRC18O15417 2968 aaPredicted RBP11.58□□□□□ -0.56
VCP-206ENST00000480327 YDJCA8MPS7 323 aa11.57□□□□□ -0.56
VCP-206ENST00000480327 GMPSP49915 693 aaPredicted RBP11.57□□□□□ -0.56
VCP-206ENST00000480327 TCIRG1Q13488 830 aa11.57□□□□□ -0.56
VCP-206ENST00000480327 SP8Q8IXZ3 490 aa11.57□□□□□ -0.56
VCP-206ENST00000480327 AIDAQ96BJ3 306 aa11.57□□□□□ -0.56
VCP-206ENST00000480327 CAPNS2Q96L46 248 aa11.57□□□□□ -0.56
VCP-206ENST00000480327 CHMP4AQ9BY43 222 aa11.57□□□□□ -0.56
VCP-206ENST00000480327 PGAP2Q9UHJ9 254 aa11.57□□□□□ -0.56
VCP-206ENST00000480327 ZNRF3Q9ULT6 936 aa11.57□□□□□ -0.56
VCP-206ENST00000480327 TLL2Q9Y6L7 1015 aa11.57□□□□□ -0.56
VCP-206ENST00000480327 AOC2O75106 756 aa11.56□□□□□ -0.56
VCP-206ENST00000480327 KIAA2012Q0VF49 1180 aa11.56□□□□□ -0.56
VCP-206ENST00000480327 DLK2Q6UY11 383 aa11.56□□□□□ -0.56
VCP-206ENST00000480327 SSH1Q8WYL5 1049 aa11.56□□□□□ -0.56
VCP-206ENST00000480327 VPS33BQ9H267 617 aa11.56□□□□□ -0.56
VCP-206ENST00000480327 ADARB2Q9NS39 739 aaKnown RBP11.56□□□□□ -0.56
VCP-206ENST00000480327 BBOX1O75936 387 aa11.55□□□□□ -0.56
VCP-206ENST00000480327 RAD17O75943 681 aa11.55□□□□□ -0.56
VCP-206ENST00000480327 GRAPQ13588 217 aa11.55□□□□□ -0.56
VCP-206ENST00000480327 DPP8Q6V1X1 898 aaPredicted RBP11.55□□□□□ -0.56
VCP-206ENST00000480327 MPNDQ8N594 471 aa11.55□□□□□ -0.56
VCP-206ENST00000480327 MRPL50Q8N5N7 158 aaKnown RBP11.55□□□□□ -0.56
VCP-206ENST00000480327 GRAPLQ8TC17 118 aaPredicted RBP11.55□□□□□ -0.56
VCP-206ENST00000480327 TRPM4Q8TD43 1214 aa11.55□□□□□ -0.56
VCP-206ENST00000480327 GLIS2Q9BZE0 524 aaPredicted RBP11.55□□□□□ -0.56
VCP-206ENST00000480327 SMC4Q9NTJ3 1288 aa11.55□□□□□ -0.56
VCP-206ENST00000480327 SPEF2Q9C093 1822 aa11.55□□□□□ -0.56
VCP-206ENST00000480327 MAP2K1Q02750 393 aaPredicted RBP11.54□□□□□ -0.56
VCP-206ENST00000480327 FLIIQ13045 1269 aa11.54□□□□□ -0.56
VCP-206ENST00000480327 CIAPIN1Q6FI81 312 aa11.54□□□□□ -0.56
VCP-206ENST00000480327 ANKRD13DQ6ZTN6 518 aa11.54□□□□□ -0.56
VCP-206ENST00000480327 RIC3Q7Z5B4 369 aa11.54□□□□□ -0.56
VCP-206ENST00000480327 SAPCD2Q86UD0 394 aa11.54□□□□□ -0.56
VCP-206ENST00000480327 CELF1Q92879 486 aaKnown RBP11.54□□□□□ -0.56
VCP-206ENST00000480327 ABHD8Q96I13 439 aa11.54□□□□□ -0.56
VCP-206ENST00000480327 GPR101Q96P66 508 aaPredicted RBP11.54□□□□□ -0.56
VCP-206ENST00000480327 ISCA1Q9BUE6 129 aa11.54□□□□□ -0.56
VCP-206ENST00000480327 TRMT112Q9UI30 125 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms