RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 NOGQ13253 232 aa21.26■□□□□ 0.99
DDX56-210ENST00000479440 DGKZQ13574 1117 aa21.26■□□□□ 0.99
DDX56-210ENST00000479440 DLG5Q8TDM6 1919 aa21.25■□□□□ 0.99
DDX56-210ENST00000479440 BBOX1O75936 387 aa21.25■□□□□ 0.99
DDX56-210ENST00000479440 MPNDQ8N594 471 aa21.25■□□□□ 0.99
DDX56-210ENST00000479440 SLC10A5Q5PT55 438 aa21.24■□□□□ 0.99
DDX56-210ENST00000479440 SP8Q8IXZ3 490 aa21.24■□□□□ 0.99
DDX56-210ENST00000479440 TRPM4Q8TD43 1214 aa21.24■□□□□ 0.99
DDX56-210ENST00000479440 RAD17O75943 681 aa21.23■□□□□ 0.99
DDX56-210ENST00000479440 H7C1D1 291 aa21.22■□□□□ 0.99
DDX56-210ENST00000479440 NFE2L2Q16236 605 aa21.22■□□□□ 0.99
DDX56-210ENST00000479440 HSP90AB3PQ58FF7 597 aa21.22■□□□□ 0.99
DDX56-210ENST00000479440 DDX46Q7L014 1031 aaKnown RBP21.22■□□□□ 0.99
DDX56-210ENST00000479440 LAMB2P55268 1798 aa21.22■□□□□ 0.99
DDX56-210ENST00000479440 ANKRD36CQ5JPF3 1778 aa21.22■□□□□ 0.99
DDX56-210ENST00000479440 HIRAP54198 1017 aaPredicted RBP21.21■□□□□ 0.99
DDX56-210ENST00000479440 HUNKP57058 714 aa21.21■□□□□ 0.99
DDX56-210ENST00000479440 GRAPQ13588 217 aa21.21■□□□□ 0.99
DDX56-210ENST00000479440 TMC4Q7Z404 712 aa21.21■□□□□ 0.99
DDX56-210ENST00000479440 GRAPLQ8TC17 118 aaPredicted RBP21.21■□□□□ 0.99
DDX56-210ENST00000479440 CNOT7Q9UIV1 285 aaKnown RBP21.21■□□□□ 0.99
DDX56-210ENST00000479440 MAPK8IP3Q9UPT6 1336 aa21.21■□□□□ 0.99
DDX56-210ENST00000479440 DUOX1Q9NRD9 1551 aa21.2■□□□□ 0.98
DDX56-210ENST00000479440 MICALL2Q8IY33 904 aa21.2■□□□□ 0.98
DDX56-210ENST00000479440 THUMPD2Q9BTF0 503 aaKnown RBP21.2■□□□□ 0.98
DDX56-210ENST00000479440 SAGE1Q9NXZ1 904 aa21.2■□□□□ 0.98
DDX56-210ENST00000479440 TSPYL4Q9UJ04 414 aa21.2■□□□□ 0.98
DDX56-210ENST00000479440 LRRC37AA6NMS7 1700 aa21.2■□□□□ 0.98
DDX56-210ENST00000479440 LRP10Q7Z4F1 713 aa21.19■□□□□ 0.98
DDX56-210ENST00000479440 PNNQ9H307 717 aaKnown RBP21.19■□□□□ 0.98
DDX56-210ENST00000479440 USP48Q86UV5 1035 aa21.18■□□□□ 0.98
DDX56-210ENST00000479440 PLEKHF1Q96S99 279 aa21.18■□□□□ 0.98
DDX56-210ENST00000479440 SH3TC1Q8TE82 1336 aa21.18■□□□□ 0.98
DDX56-210ENST00000479440 CASP8AP2Q9UKL3 1982 aa21.17■□□□□ 0.98
DDX56-210ENST00000479440 YDJCA8MPS7 323 aa21.17■□□□□ 0.98
DDX56-210ENST00000479440 HCLS1P14317 486 aaPredicted RBP21.17■□□□□ 0.98
DDX56-210ENST00000479440 EIF2S2P20042 333 aaKnown RBP21.17■□□□□ 0.98
DDX56-210ENST00000479440 RGMBQ6NW40 437 aa21.17■□□□□ 0.98
DDX56-210ENST00000479440 NLRP10Q86W26 655 aa21.17■□□□□ 0.98
DDX56-210ENST00000479440 DPF2Q92785 391 aa21.17■□□□□ 0.98
DDX56-210ENST00000479440 PDIA6Q15084 440 aa21.16■□□□□ 0.98
DDX56-210ENST00000479440 KRT26Q7Z3Y9 468 aa21.16■□□□□ 0.98
DDX56-210ENST00000479440 TRMT112Q9UI30 125 aaKnown RBP21.16■□□□□ 0.98
DDX56-210ENST00000479440 DDX60Q8IY21 1712 aaKnown RBP21.15■□□□□ 0.98
DDX56-210ENST00000479440 SHTN1A0MZ66 631 aa21.15■□□□□ 0.98
DDX56-210ENST00000479440 C2orf69Q8N8R5 385 aa21.15■□□□□ 0.98
DDX56-210ENST00000479440 CCDC102AQ96A19 550 aa21.15■□□□□ 0.98
DDX56-210ENST00000479440 GBA2Q9HCG7 927 aaPredicted RBP21.15■□□□□ 0.98
DDX56-210ENST00000479440 RPS12P25398 132 aaKnown RBP21.14■□□□□ 0.97
DDX56-210ENST00000479440 WASHC4Q2M389 1173 aa21.14■□□□□ 0.97
DDX56-210ENST00000479440 PROSER3Q2NL68 480 aa21.14■□□□□ 0.97
DDX56-210ENST00000479440 ZIC5Q96T25 663 aa21.14■□□□□ 0.97
DDX56-210ENST00000479440 ZBTB12Q9Y330 459 aaPredicted RBP21.14■□□□□ 0.97
DDX56-210ENST00000479440 FAM155AB1AL88 458 aaPredicted RBP21.13■□□□□ 0.97
DDX56-210ENST00000479440 PSMD14O00487 310 aa21.13■□□□□ 0.97
DDX56-210ENST00000479440 TBC1D10BQ4KMP7 808 aaPredicted RBP21.13■□□□□ 0.97
DDX56-210ENST00000479440 DCPSQ96C86 337 aaKnown RBP21.13■□□□□ 0.97
DDX56-210ENST00000479440 BABAM1Q9NWV8 329 aa21.13■□□□□ 0.97
DDX56-210ENST00000479440 ANXA1P04083 346 aa21.12■□□□□ 0.97
DDX56-210ENST00000479440 AIMP1Q12904 312 aaKnown RBP21.12■□□□□ 0.97
DDX56-210ENST00000479440 COPS6Q7L5N1 327 aa21.12■□□□□ 0.97
DDX56-210ENST00000479440 SAMD7Q7Z3H4 446 aa21.12■□□□□ 0.97
DDX56-210ENST00000479440 ZNF157P51786 506 aaPredicted RBP21.11■□□□□ 0.97
DDX56-210ENST00000479440 TCIRG1Q13488 830 aa21.11■□□□□ 0.97
DDX56-210ENST00000479440 XAGE3Q8WTP9 111 aa21.11■□□□□ 0.97
DDX56-210ENST00000479440 EYA3Q99504 573 aa21.11■□□□□ 0.97
DDX56-210ENST00000479440 DBNDD1Q9H9R9 158 aa21.11■□□□□ 0.97
DDX56-210ENST00000479440 ADM5C9JUS6 153 aa21.1■□□□□ 0.97
DDX56-210ENST00000479440 KIF23Q02241 960 aaPredicted RBP21.1■□□□□ 0.97
DDX56-210ENST00000479440 ECE2O60344 883 aa21.09■□□□□ 0.97
DDX56-210ENST00000479440 SLC10A3P09131 477 aa21.09■□□□□ 0.97
DDX56-210ENST00000479440 SOX10P56693 466 aa21.09■□□□□ 0.97
DDX56-210ENST00000479440 LMOD3Q0VAK6 560 aa21.09■□□□□ 0.97
DDX56-210ENST00000479440 KIF4BQ2VIQ3 1234 aa21.09■□□□□ 0.97
DDX56-210ENST00000479440 NSFL1CQ9UNZ2 370 aaKnown RBP21.09■□□□□ 0.97
DDX56-210ENST00000479440 C6orf229H3BNL8 230 aa21.08■□□□□ 0.97
DDX56-210ENST00000479440 DLK2Q6UY11 383 aa21.08■□□□□ 0.97
DDX56-210ENST00000479440 SULF1Q8IWU6 871 aa21.08■□□□□ 0.97
DDX56-210ENST00000479440 RIMBP2O15034 1052 aa21.07■□□□□ 0.96
DDX56-210ENST00000479440 TRPA1O75762 1119 aa21.07■□□□□ 0.96
DDX56-210ENST00000479440 EGFRP00533 1210 aa21.07■□□□□ 0.96
DDX56-210ENST00000479440 RBM26Q5T8P6 1007 aaKnown RBP21.07■□□□□ 0.96
DDX56-210ENST00000479440 REM2Q8IYK8 340 aaPredicted RBP21.07■□□□□ 0.96
DDX56-210ENST00000479440 NECTIN2Q92692 538 aa21.07■□□□□ 0.96
DDX56-210ENST00000479440 RNF186Q9NXI6 227 aa21.07■□□□□ 0.96
DDX56-210ENST00000479440 GGA3Q9NZ52 723 aa21.07■□□□□ 0.96
DDX56-210ENST00000479440 CTU1Q7Z7A3 348 aaKnown RBP21.06■□□□□ 0.96
DDX56-210ENST00000479440 RTL9Q8NET4 1388 aa21.06■□□□□ 0.96
DDX56-210ENST00000479440 TAF1P21675 1872 aa21.05■□□□□ 0.96
DDX56-210ENST00000479440 RIPK4P57078 832 aa21.05■□□□□ 0.96
DDX56-210ENST00000479440 CELF1Q92879 486 aaKnown RBP21.05■□□□□ 0.96
DDX56-210ENST00000479440 GPSM2P81274 684 aa21.04■□□□□ 0.96
DDX56-210ENST00000479440 SF3B3Q15393 1217 aaKnown RBP21.04■□□□□ 0.96
DDX56-210ENST00000479440 PRPF38BQ5VTL8 546 aaKnown RBP21.04■□□□□ 0.96
DDX56-210ENST00000479440 POLLQ9UGP5 575 aa21.04■□□□□ 0.96
DDX56-210ENST00000479440 ZNF609O15014 1411 aa21.04■□□□□ 0.96
DDX56-210ENST00000479440 DOK7Q18PE1 504 aa21.03■□□□□ 0.96
DDX56-210ENST00000479440 PLBD2Q8NHP8 589 aa21.03■□□□□ 0.96
DDX56-210ENST00000479440 CDCA5Q96FF9 252 aa21.03■□□□□ 0.96
DDX56-210ENST00000479440 AKAP11Q9UKA4 1901 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms