RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 CDK12Q9NYV4 1490 aaPredicted RBP24.74■■□□□ 1.55
SDF4-206ENST00000478938 EPB41L2O43491 1005 aaKnown RBP24.74■■□□□ 1.55
SDF4-206ENST00000478938 SH2B1Q9NRF2 756 aaPredicted RBP24.74■■□□□ 1.55
SDF4-206ENST00000478938 STAP2Q9UGK3 403 aa24.74■■□□□ 1.55
SDF4-206ENST00000478938 CFAP65Q6ZU64 1925 aaKnown RBP24.73■■□□□ 1.55
SDF4-206ENST00000478938 TTC41PQ6P2S7 1318 aa24.73■■□□□ 1.55
SDF4-206ENST00000478938 IFT172Q9UG01 1749 aa24.73■■□□□ 1.55
SDF4-206ENST00000478938 MAP2K2P36507 400 aa24.73■■□□□ 1.55
SDF4-206ENST00000478938 CCDC150Q8NCX0 1101 aa24.73■■□□□ 1.55
SDF4-206ENST00000478938 NEURL4Q96JN8 1562 aa24.73■■□□□ 1.55
SDF4-206ENST00000478938 RPS6KA5O75582 802 aa24.73■■□□□ 1.55
SDF4-206ENST00000478938 CCDC30Q5VVM6 783 aa24.73■■□□□ 1.55
SDF4-206ENST00000478938 CWC27Q6UX04 472 aaKnown RBP24.73■■□□□ 1.55
SDF4-206ENST00000478938 SETBP1Q9Y6X0 1596 aa24.73■■□□□ 1.55
SDF4-206ENST00000478938 MROH2AA6NES4 1674 aa24.72■■□□□ 1.55
SDF4-206ENST00000478938 PATL2C9JE40 543 aaKnown RBP24.72■■□□□ 1.55
SDF4-206ENST00000478938 N4BP1O75113 896 aaKnown RBP24.72■■□□□ 1.55
SDF4-206ENST00000478938 FAM177A1Q8N128 213 aaPredicted RBP24.72■■□□□ 1.55
SDF4-206ENST00000478938 ANKRD20A12PQ8NF67 263 aa24.72■■□□□ 1.55
SDF4-206ENST00000478938 ERCC4Q92889 916 aaPredicted RBP24.72■■□□□ 1.55
SDF4-206ENST00000478938 ZSCAN31Q96LW9 406 aaPredicted RBP24.72■■□□□ 1.55
SDF4-206ENST00000478938 ADGRB1O14514 1584 aa24.72■■□□□ 1.55
SDF4-206ENST00000478938 CHGAP10645 457 aaKnown RBP24.72■■□□□ 1.55
SDF4-206ENST00000478938 IMPACTQ9P2X3 320 aa24.72■■□□□ 1.55
SDF4-206ENST00000478938 F6X3S4 739 aa24.71■■□□□ 1.55
SDF4-206ENST00000478938 TUBB4AP04350 444 aa24.71■■□□□ 1.55
SDF4-206ENST00000478938 VPS53Q5VIR6 699 aa24.71■■□□□ 1.55
SDF4-206ENST00000478938 CYB5RLQ6IPT4 315 aa24.71■■□□□ 1.55
SDF4-206ENST00000478938 IL1RAPL2Q9NP60 686 aa24.71■■□□□ 1.55
SDF4-206ENST00000478938 TPCN1Q9ULQ1 816 aa24.71■■□□□ 1.55
SDF4-206ENST00000478938 PNMA6EA0A0J9YXQ4 647 aa24.71■■□□□ 1.55
SDF4-206ENST00000478938 MCM6Q14566 821 aa24.71■■□□□ 1.55
SDF4-206ENST00000478938 NUTM1Q86Y26 1132 aa24.71■■□□□ 1.55
SDF4-206ENST00000478938 XPO4Q9C0E2 1151 aaKnown RBP24.71■■□□□ 1.55
SDF4-206ENST00000478938 FAN1Q9Y2M0 1017 aa24.71■■□□□ 1.55
SDF4-206ENST00000478938 RIMS2Q9UQ26 1411 aa24.7■■□□□ 1.55
SDF4-206ENST00000478938 CPP00450 1065 aa24.7■■□□□ 1.55
SDF4-206ENST00000478938 APOBRQ0VD83 1088 aa24.7■■□□□ 1.55
SDF4-206ENST00000478938 EFCAB2Q5VUJ9 269 aa24.7■■□□□ 1.55
SDF4-206ENST00000478938 LARP1Q6PKG0 1096 aaKnown RBP24.7■■□□□ 1.55
SDF4-206ENST00000478938 LRRC31Q6UY01 552 aa24.7■■□□□ 1.55
SDF4-206ENST00000478938 AKAP2Q9Y2D5 859 aa24.7■■□□□ 1.55
SDF4-206ENST00000478938 TET3O43151 1660 aa24.7■■□□□ 1.54
SDF4-206ENST00000478938 ATP6V1AP38606 617 aa24.7■■□□□ 1.54
SDF4-206ENST00000478938 TTLL5Q6EMB2 1281 aa24.7■■□□□ 1.54
SDF4-206ENST00000478938 ADCY9O60503 1353 aa24.7■■□□□ 1.54
SDF4-206ENST00000478938 MAP2K7O14733 419 aa24.69■■□□□ 1.54
SDF4-206ENST00000478938 CEP89Q96ST8 783 aa24.69■■□□□ 1.54
SDF4-206ENST00000478938 KCNJ6P48051 423 aa24.69■■□□□ 1.54
SDF4-206ENST00000478938 IFNKQ9P0W0 207 aa24.69■■□□□ 1.54
SDF4-206ENST00000478938 CDC42BPGQ6DT37 1551 aa24.69■■□□□ 1.54
SDF4-206ENST00000478938 SATB1Q01826 763 aa24.68■■□□□ 1.54
SDF4-206ENST00000478938 PPP2R3AQ06190 1150 aa24.68■■□□□ 1.54
SDF4-206ENST00000478938 TADA2BQ86TJ2 420 aa24.68■■□□□ 1.54
SDF4-206ENST00000478938 MICALL1Q8N3F8 863 aa24.68■■□□□ 1.54
SDF4-206ENST00000478938 TDO2P48775 406 aa24.68■■□□□ 1.54
SDF4-206ENST00000478938 RSRC2Q7L4I2 434 aaKnown RBP24.68■■□□□ 1.54
SDF4-206ENST00000478938 EFCAB13Q8IY85 973 aa24.68■■□□□ 1.54
SDF4-206ENST00000478938 C14orf93Q9H972 538 aaKnown RBP24.68■■□□□ 1.54
SDF4-206ENST00000478938 MKRN1Q9UHC7 482 aaKnown RBP24.68■■□□□ 1.54
SDF4-206ENST00000478938 PPP6R1Q9UPN7 881 aa24.68■■□□□ 1.54
SDF4-206ENST00000478938 CYP46A1Q9Y6A2 500 aa24.68■■□□□ 1.54
SDF4-206ENST00000478938 CEBPZQ03701 1054 aaKnown RBP24.67■■□□□ 1.54
SDF4-206ENST00000478938 PRPF40BQ6NWY9 871 aaKnown RBP24.67■■□□□ 1.54
SDF4-206ENST00000478938 MED4Q9NPJ6 270 aa24.67■■□□□ 1.54
SDF4-206ENST00000478938 KIF1CO43896 1103 aaKnown RBP24.67■■□□□ 1.54
SDF4-206ENST00000478938 PLEKHO1Q53GL0 409 aaPredicted RBP24.67■■□□□ 1.54
SDF4-206ENST00000478938 KIF1BO60333 1816 aa24.67■■□□□ 1.54
SDF4-206ENST00000478938 SRGAP3O43295 1099 aa24.66■■□□□ 1.54
SDF4-206ENST00000478938 GNAI2P04899 355 aa24.66■■□□□ 1.54
SDF4-206ENST00000478938 COL9A3Q14050 684 aaPredicted RBP24.66■■□□□ 1.54
SDF4-206ENST00000478938 CEP57L1Q8IYX8 460 aa24.66■■□□□ 1.54
SDF4-206ENST00000478938 ANO10Q9NW15 660 aa24.66■■□□□ 1.54
SDF4-206ENST00000478938 PDCP20941 246 aa24.66■■□□□ 1.54
SDF4-206ENST00000478938 AFAP1Q8N556 730 aa24.66■■□□□ 1.54
SDF4-206ENST00000478938 DNAAF4Q8WXU2 420 aa24.66■■□□□ 1.54
SDF4-206ENST00000478938 KAT2BQ92831 832 aa24.66■■□□□ 1.54
SDF4-206ENST00000478938 NRDCO43847 1150 aa24.65■■□□□ 1.54
SDF4-206ENST00000478938 PTH1RQ03431 593 aa24.65■■□□□ 1.54
SDF4-206ENST00000478938 ZRSR1Q15695 479 aaKnown RBP24.65■■□□□ 1.54
SDF4-206ENST00000478938 GOLPH3LQ9H4A5 285 aa24.65■■□□□ 1.54
SDF4-206ENST00000478938 ZSWIM6Q9HCJ5 1215 aa24.65■■□□□ 1.54
SDF4-206ENST00000478938 SKIDA1Q1XH10 827 aa24.64■■□□□ 1.54
SDF4-206ENST00000478938 SAMD1Q6SPF0 538 aaPredicted RBP24.64■■□□□ 1.54
SDF4-206ENST00000478938 RABGGTAQ92696 567 aa24.64■■□□□ 1.54
SDF4-206ENST00000478938 WDR24Q96S15 920 aa24.64■■□□□ 1.53
SDF4-206ENST00000478938 BICC1Q9H694 974 aaKnown RBP24.64■■□□□ 1.53
SDF4-206ENST00000478938 CD163L1Q9NR16 1453 aa24.64■■□□□ 1.53
SDF4-206ENST00000478938 SLC4A2P04920 1241 aa24.63■■□□□ 1.53
SDF4-206ENST00000478938 MNAT1P51948 309 aa24.63■■□□□ 1.53
SDF4-206ENST00000478938 ISM2Q6H9L7 571 aa24.63■■□□□ 1.53
SDF4-206ENST00000478938 CCDC151A5D8V7 595 aa24.63■■□□□ 1.53
SDF4-206ENST00000478938 PHACTR2O75167 634 aa24.63■■□□□ 1.53
SDF4-206ENST00000478938 TRHP20396 242 aaPredicted RBP24.63■■□□□ 1.53
SDF4-206ENST00000478938 EGFL6Q8IUX8 553 aa24.63■■□□□ 1.53
SDF4-206ENST00000478938 PUS7Q96PZ0 661 aaKnown RBP24.63■■□□□ 1.53
SDF4-206ENST00000478938 ZSWIM4Q9H7M6 989 aa24.63■■□□□ 1.53
SDF4-206ENST00000478938 ZCCHC11Q5TAX3 1644 aaKnown RBP24.63■■□□□ 1.53
SDF4-206ENST00000478938 WWC2Q6AWC2 1192 aa24.62■■□□□ 1.53
SDF4-206ENST00000478938 G2E3Q7L622 706 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms