RNA–Protein interactions for RNA: ENST00000478215.1

COL1A2-207, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 3

Gene COL1A2, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-207ENST00000478215 UBE3BQ7Z3V4 1068 aa16.58■□□□□ 0.24
COL1A2-207ENST00000478215 LINS1Q8NG48 757 aa16.58■□□□□ 0.24
COL1A2-207ENST00000478215 CDHR2Q9BYE9 1310 aa16.58■□□□□ 0.24
COL1A2-207ENST00000478215 PSME4Q14997 1843 aa16.58■□□□□ 0.24
COL1A2-207ENST00000478215 SCN9AQ15858 1988 aa16.58■□□□□ 0.24
COL1A2-207ENST00000478215 SCN4AP35499 1836 aa16.57■□□□□ 0.24
COL1A2-207ENST00000478215 WDR90Q96KV7 1748 aa16.57■□□□□ 0.24
COL1A2-207ENST00000478215 FKBP4Q02790 459 aaKnown RBP eCLIP16.57■□□□□ 0.24
COL1A2-207ENST00000478215 BEND3Q5T5X7 828 aa16.57■□□□□ 0.24
COL1A2-207ENST00000478215 H7C1W4 665 aa16.56■□□□□ 0.24
COL1A2-207ENST00000478215 PDE8AO60658 829 aa16.56■□□□□ 0.24
COL1A2-207ENST00000478215 GRAPQ13588 217 aa16.56■□□□□ 0.24
COL1A2-207ENST00000478215 ALDH1L2Q3SY69 923 aa16.56■□□□□ 0.24
COL1A2-207ENST00000478215 RTKN2Q8IZC4 609 aa16.56■□□□□ 0.24
COL1A2-207ENST00000478215 GRAPLQ8TC17 118 aaPredicted RBP16.56■□□□□ 0.24
COL1A2-207ENST00000478215 CELF1Q92879 486 aaKnown RBP16.56■□□□□ 0.24
COL1A2-207ENST00000478215 CCDC85AQ96PX6 553 aaPredicted RBP16.56■□□□□ 0.24
COL1A2-207ENST00000478215 ZNF277Q9NRM2 450 aaPredicted RBP16.56■□□□□ 0.24
COL1A2-207ENST00000478215 CASP7P55210 303 aa16.55■□□□□ 0.24
COL1A2-207ENST00000478215 CC2D2BQ6DHV5 1058 aa16.55■□□□□ 0.24
COL1A2-207ENST00000478215 SLC4A10Q6U841 1118 aa16.55■□□□□ 0.24
COL1A2-207ENST00000478215 SEC31BQ9NQW1 1179 aa16.55■□□□□ 0.24
COL1A2-207ENST00000478215 SMC4Q9NTJ3 1288 aa16.55■□□□□ 0.24
COL1A2-207ENST00000478215 ATP6V0A2Q9Y487 856 aa16.55■□□□□ 0.24
COL1A2-207ENST00000478215 ZBED9Q6R2W3 1325 aa16.54■□□□□ 0.24
COL1A2-207ENST00000478215 ZC3H4Q9UPT8 1303 aaKnown RBP16.54■□□□□ 0.24
COL1A2-207ENST00000478215 BBOX1O75936 387 aa16.54■□□□□ 0.24
COL1A2-207ENST00000478215 CT47B1P0C2W7 299 aaPredicted RBP16.54■□□□□ 0.24
COL1A2-207ENST00000478215 CTSWP56202 376 aa16.54■□□□□ 0.24
COL1A2-207ENST00000478215 PSMD1Q99460 953 aa16.54■□□□□ 0.24
COL1A2-207ENST00000478215 GPBP1L1Q9HC44 474 aaPredicted RBP16.54■□□□□ 0.24
COL1A2-207ENST00000478215 PTPRCP08575 1304 aa16.53■□□□□ 0.24
COL1A2-207ENST00000478215 HSP90B1P14625 803 aaKnown RBP16.53■□□□□ 0.24
COL1A2-207ENST00000478215 CCDC152Q4G0S7 254 aa16.53■□□□□ 0.24
COL1A2-207ENST00000478215 SP8Q8IXZ3 490 aa16.53■□□□□ 0.24
COL1A2-207ENST00000478215 POLR2AP24928 1970 aaKnown RBP16.53■□□□□ 0.24
COL1A2-207ENST00000478215 ZNF646O15015 1829 aaPredicted RBP16.52■□□□□ 0.24
COL1A2-207ENST00000478215 RARSP54136 660 aaKnown RBP16.52■□□□□ 0.24
COL1A2-207ENST00000478215 TTLL11Q8NHH1 800 aa16.52■□□□□ 0.24
COL1A2-207ENST00000478215 NMRK2Q9NPI5 230 aa16.52■□□□□ 0.24
COL1A2-207ENST00000478215 IARSP41252 1262 aaKnown RBP16.51■□□□□ 0.23
COL1A2-207ENST00000478215 PLA2G12BQ9BX93 195 aa16.51■□□□□ 0.23
COL1A2-207ENST00000478215 SRCIN1Q9C0H9 1055 aa16.51■□□□□ 0.23
COL1A2-207ENST00000478215 GRM8O00222 908 aa16.5■□□□□ 0.23
COL1A2-207ENST00000478215 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
COL1A2-207ENST00000478215 RPS8P62241 208 aaKnown RBP16.5■□□□□ 0.23
COL1A2-207ENST00000478215 GRIPAP1Q4V328 841 aa16.5■□□□□ 0.23
COL1A2-207ENST00000478215 TMC4Q7Z404 712 aa16.5■□□□□ 0.23
COL1A2-207ENST00000478215 GREM2Q9H772 168 aa16.5■□□□□ 0.23
COL1A2-207ENST00000478215 RTL9Q8NET4 1388 aa16.5■□□□□ 0.23
COL1A2-207ENST00000478215 GLTPD2A6NH11 291 aa16.49■□□□□ 0.23
COL1A2-207ENST00000478215 KIF3CO14782 793 aa16.49■□□□□ 0.23
COL1A2-207ENST00000478215 BRPF1P55201 1214 aaPredicted RBP16.49■□□□□ 0.23
COL1A2-207ENST00000478215 MPNDQ8N594 471 aa16.49■□□□□ 0.23
COL1A2-207ENST00000478215 KDM2BQ8NHM5 1336 aa16.48■□□□□ 0.23
COL1A2-207ENST00000478215 FOXO4P98177 505 aa16.48■□□□□ 0.23
COL1A2-207ENST00000478215 FAM161AQ3B820 660 aa16.48■□□□□ 0.23
COL1A2-207ENST00000478215 EPHA10Q5JZY3 1008 aa16.48■□□□□ 0.23
COL1A2-207ENST00000478215 DPP8Q6V1X1 898 aaPredicted RBP16.48■□□□□ 0.23
COL1A2-207ENST00000478215 RTFDC1Q9BY42 306 aaPredicted RBP16.48■□□□□ 0.23
COL1A2-207ENST00000478215 TMX4Q9H1E5 349 aaPredicted RBP16.48■□□□□ 0.23
COL1A2-207ENST00000478215 NOB1Q9ULX3 412 aaKnown RBP16.48■□□□□ 0.23
COL1A2-207ENST00000478215 MYH13Q9UKX3 1938 aa16.48■□□□□ 0.23
COL1A2-207ENST00000478215 ZNF541Q9H0D2 1346 aa16.47■□□□□ 0.23
COL1A2-207ENST00000478215 CSF1RP07333 972 aa16.47■□□□□ 0.23
COL1A2-207ENST00000478215 GPSM2P81274 684 aa16.47■□□□□ 0.23
COL1A2-207ENST00000478215 AOC3Q16853 763 aa16.47■□□□□ 0.23
COL1A2-207ENST00000478215 C9orf78Q9NZ63 289 aaPredicted RBP16.47■□□□□ 0.23
COL1A2-207ENST00000478215 PPIP5K2O43314 1243 aa16.46■□□□□ 0.23
COL1A2-207ENST00000478215 BCAR3O75815 825 aa16.46■□□□□ 0.23
COL1A2-207ENST00000478215 NBPF7P0C2Y1 421 aaPredicted RBP16.46■□□□□ 0.23
COL1A2-207ENST00000478215 ANKRD18AQ8IVF6 992 aa16.46■□□□□ 0.23
COL1A2-207ENST00000478215 LARGE2Q8N3Y3 721 aa16.46■□□□□ 0.23
COL1A2-207ENST00000478215 KAZALD1Q96I82 304 aa16.46■□□□□ 0.23
COL1A2-207ENST00000478215 RRAGCQ9HB90 399 aa16.46■□□□□ 0.23
COL1A2-207ENST00000478215 NSFL1CQ9UNZ2 370 aaKnown RBP16.46■□□□□ 0.23
COL1A2-207ENST00000478215 UTYO14607 1347 aa16.45■□□□□ 0.22
COL1A2-207ENST00000478215 FZD9O00144 591 aa16.45■□□□□ 0.22
COL1A2-207ENST00000478215 DDNO94850 711 aaPredicted RBP16.45■□□□□ 0.22
COL1A2-207ENST00000478215 ITGA6P23229 1130 aa16.45■□□□□ 0.22
COL1A2-207ENST00000478215 SUCLG2Q96I99 432 aa16.45■□□□□ 0.22
COL1A2-207ENST00000478215 GPR101Q96P66 508 aaPredicted RBP16.45■□□□□ 0.22
COL1A2-207ENST00000478215 CDC5LQ99459 802 aaKnown RBP16.45■□□□□ 0.22
COL1A2-207ENST00000478215 POLLQ9UGP5 575 aa16.45■□□□□ 0.22
COL1A2-207ENST00000478215 ADAMTSL1Q8N6G6 1762 aa16.44■□□□□ 0.22
COL1A2-207ENST00000478215 POTECB2RU33 542 aa16.44■□□□□ 0.22
COL1A2-207ENST00000478215 DPY19L2Q6NUT2 758 aa16.44■□□□□ 0.22
COL1A2-207ENST00000478215 LMBR1LQ6UX01 489 aa16.44■□□□□ 0.22
COL1A2-207ENST00000478215 SUPT20HQ8NEM7 779 aa16.44■□□□□ 0.22
COL1A2-207ENST00000478215 JDP2Q8WYK2 163 aa16.44■□□□□ 0.22
COL1A2-207ENST00000478215 TNNQ9UQP3 1299 aa16.44■□□□□ 0.22
COL1A2-207ENST00000478215 KIF16BQ96L93 1317 aa16.44■□□□□ 0.22
COL1A2-207ENST00000478215 CEP350Q5VT06 3117 aa16.43■□□□□ 0.22
COL1A2-207ENST00000478215 KIAA2012Q0VF49 1180 aa16.43■□□□□ 0.22
COL1A2-207ENST00000478215 USP44Q9H0E7 712 aa16.43■□□□□ 0.22
COL1A2-207ENST00000478215 CHMP3Q9Y3E7 222 aa16.43■□□□□ 0.22
COL1A2-207ENST00000478215 WTIPA6NIX2 430 aaPredicted RBP16.42■□□□□ 0.22
COL1A2-207ENST00000478215 C6orf229H3BNL8 230 aa16.42■□□□□ 0.22
COL1A2-207ENST00000478215 C1QTNF8P60827 252 aa16.42■□□□□ 0.22
COL1A2-207ENST00000478215 NIM1KQ8IY84 436 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms