RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 BEND3Q5T5X7 828 aa28.47■■■□□ 2.15
SF1-214ENST00000477596 CELF1Q92879 486 aaKnown RBP28.47■■■□□ 2.15
SF1-214ENST00000477596 GPBP1L1Q9HC44 474 aaPredicted RBP28.47■■■□□ 2.15
SF1-214ENST00000477596 PDE8AO60658 829 aa28.46■■■□□ 2.15
SF1-214ENST00000477596 RTKN2Q8IZC4 609 aa28.46■■■□□ 2.15
SF1-214ENST00000477596 MYH3P11055 1940 aa28.45■■■□□ 2.15
SF1-214ENST00000477596 H7C1W4 665 aa28.45■■■□□ 2.14
SF1-214ENST00000477596 SEC31BQ9NQW1 1179 aa28.45■■■□□ 2.14
SF1-214ENST00000477596 SMC4Q9NTJ3 1288 aa28.45■■■□□ 2.14
SF1-214ENST00000477596 ATP6V0A2Q9Y487 856 aa28.45■■■□□ 2.14
SF1-214ENST00000477596 LRRC37AA6NMS7 1700 aa28.45■■■□□ 2.14
SF1-214ENST00000477596 CASP7P55210 303 aa28.44■■■□□ 2.14
SF1-214ENST00000477596 SLC4A10Q6U841 1118 aa28.44■■■□□ 2.14
SF1-214ENST00000477596 ALDH1L2Q3SY69 923 aa28.43■■■□□ 2.14
SF1-214ENST00000477596 CC2D2BQ6DHV5 1058 aa28.43■■■□□ 2.14
SF1-214ENST00000477596 COL4A5P29400 1685 aa28.42■■■□□ 2.14
SF1-214ENST00000477596 BBOX1O75936 387 aa28.42■■■□□ 2.14
SF1-214ENST00000477596 CTSWP56202 376 aa28.42■■■□□ 2.14
SF1-214ENST00000477596 HSP90B1P14625 803 aaKnown RBP28.41■■■□□ 2.14
SF1-214ENST00000477596 PSMD1Q99460 953 aa28.41■■■□□ 2.14
SF1-214ENST00000477596 NMRK2Q9NPI5 230 aa28.41■■■□□ 2.14
SF1-214ENST00000477596 ZC3H4Q9UPT8 1303 aaKnown RBP28.41■■■□□ 2.14
SF1-214ENST00000477596 CT47B1P0C2W7 299 aaPredicted RBP28.4■■■□□ 2.14
SF1-214ENST00000477596 CCDC152Q4G0S7 254 aa28.4■■■□□ 2.14
SF1-214ENST00000477596 DUOX1Q9NRD9 1551 aa28.4■■■□□ 2.14
SF1-214ENST00000477596 PTPRCP08575 1304 aa28.4■■■□□ 2.14
SF1-214ENST00000477596 ZBED9Q6R2W3 1325 aa28.4■■■□□ 2.14
SF1-214ENST00000477596 IARSP41252 1262 aaKnown RBP28.39■■■□□ 2.14
SF1-214ENST00000477596 SP8Q8IXZ3 490 aa28.39■■■□□ 2.14
SF1-214ENST00000477596 TTLL11Q8NHH1 800 aa28.38■■■□□ 2.13
SF1-214ENST00000477596 SPEF2Q9C093 1822 aa28.38■■■□□ 2.13
SF1-214ENST00000477596 RARSP54136 660 aaKnown RBP28.37■■■□□ 2.13
SF1-214ENST00000477596 SRCIN1Q9C0H9 1055 aa28.37■■■□□ 2.13
SF1-214ENST00000477596 GREM2Q9H772 168 aa28.37■■■□□ 2.13
SF1-214ENST00000477596 KIF3CO14782 793 aa28.36■■■□□ 2.13
SF1-214ENST00000477596 TMX4Q9H1E5 349 aaPredicted RBP28.36■■■□□ 2.13
SF1-214ENST00000477596 LTBP1Q14766 1721 aa28.35■■■□□ 2.13
SF1-214ENST00000477596 ALDH1L1O75891 902 aa28.35■■■□□ 2.13
SF1-214ENST00000477596 RPS8P62241 208 aaKnown RBP28.35■■■□□ 2.13
SF1-214ENST00000477596 DPP8Q6V1X1 898 aaPredicted RBP28.35■■■□□ 2.13
SF1-214ENST00000477596 PLA2G12BQ9BX93 195 aa28.35■■■□□ 2.13
SF1-214ENST00000477596 GLTPD2A6NH11 291 aa28.34■■■□□ 2.13
SF1-214ENST00000477596 GRM8O00222 908 aa28.34■■■□□ 2.13
SF1-214ENST00000477596 GRIPAP1Q4V328 841 aa28.34■■■□□ 2.13
SF1-214ENST00000477596 TMC4Q7Z404 712 aa28.34■■■□□ 2.13
SF1-214ENST00000477596 MPNDQ8N594 471 aa28.34■■■□□ 2.13
SF1-214ENST00000477596 NOB1Q9ULX3 412 aaKnown RBP28.34■■■□□ 2.13
SF1-214ENST00000477596 KDM2BQ8NHM5 1336 aa28.34■■■□□ 2.13
SF1-214ENST00000477596 ZNF541Q9H0D2 1346 aa28.34■■■□□ 2.13
SF1-214ENST00000477596 FAM161AQ3B820 660 aa28.33■■■□□ 2.13
SF1-214ENST00000477596 GPSM2P81274 684 aa28.32■■■□□ 2.12
SF1-214ENST00000477596 AOC3Q16853 763 aa28.32■■■□□ 2.12
SF1-214ENST00000477596 EPHA10Q5JZY3 1008 aa28.32■■■□□ 2.12
SF1-214ENST00000477596 RTFDC1Q9BY42 306 aaPredicted RBP28.32■■■□□ 2.12
SF1-214ENST00000477596 RTL9Q8NET4 1388 aa28.32■■■□□ 2.12
SF1-214ENST00000477596 PPIP5K2O43314 1243 aa28.31■■■□□ 2.12
SF1-214ENST00000477596 LARGE2Q8N3Y3 721 aa28.31■■■□□ 2.12
SF1-214ENST00000477596 C9orf78Q9NZ63 289 aaPredicted RBP28.31■■■□□ 2.12
SF1-214ENST00000477596 FOXO4P98177 505 aa28.3■■■□□ 2.12
SF1-214ENST00000477596 ANKRD18AQ8IVF6 992 aa28.3■■■□□ 2.12
SF1-214ENST00000477596 RRAGCQ9HB90 399 aa28.3■■■□□ 2.12
SF1-214ENST00000477596 DDNO94850 711 aaPredicted RBP28.29■■■□□ 2.12
SF1-214ENST00000477596 CSF1RP07333 972 aa28.29■■■□□ 2.12
SF1-214ENST00000477596 BRPF1P55201 1214 aaPredicted RBP28.29■■■□□ 2.12
SF1-214ENST00000477596 NSFL1CQ9UNZ2 370 aaKnown RBP28.29■■■□□ 2.12
SF1-214ENST00000477596 WDR90Q96KV7 1748 aa28.29■■■□□ 2.12
SF1-214ENST00000477596 NBPF7P0C2Y1 421 aaPredicted RBP28.28■■■□□ 2.12
SF1-214ENST00000477596 SUCLG2Q96I99 432 aa28.28■■■□□ 2.12
SF1-214ENST00000477596 GPR101Q96P66 508 aaPredicted RBP28.28■■■□□ 2.12
SF1-214ENST00000477596 CDC5LQ99459 802 aaKnown RBP28.28■■■□□ 2.12
SF1-214ENST00000477596 FZD9O00144 591 aa28.27■■■□□ 2.12
SF1-214ENST00000477596 BCAR3O75815 825 aa28.27■■■□□ 2.12
SF1-214ENST00000477596 ITGA6P23229 1130 aa28.27■■■□□ 2.12
SF1-214ENST00000477596 SUPT20HQ8NEM7 779 aa28.27■■■□□ 2.12
SF1-214ENST00000477596 JDP2Q8WYK2 163 aa28.27■■■□□ 2.12
SF1-214ENST00000477596 POLLQ9UGP5 575 aa28.27■■■□□ 2.12
SF1-214ENST00000477596 DPY19L2Q6NUT2 758 aa28.26■■■□□ 2.11
SF1-214ENST00000477596 KAZALD1Q96I82 304 aa28.26■■■□□ 2.11
SF1-214ENST00000477596 UTYO14607 1347 aa28.25■■■□□ 2.11
SF1-214ENST00000477596 KIF16BQ96L93 1317 aa28.25■■■□□ 2.11
SF1-214ENST00000477596 POTECB2RU33 542 aa28.25■■■□□ 2.11
SF1-214ENST00000477596 C1QTNF8P60827 252 aa28.25■■■□□ 2.11
SF1-214ENST00000477596 NIM1KQ8IY84 436 aa28.25■■■□□ 2.11
SF1-214ENST00000477596 CHMP3Q9Y3E7 222 aa28.25■■■□□ 2.11
SF1-214ENST00000477596 KIAA2012Q0VF49 1180 aa28.24■■■□□ 2.11
SF1-214ENST00000477596 LMBR1LQ6UX01 489 aa28.24■■■□□ 2.11
SF1-214ENST00000477596 TNNQ9UQP3 1299 aa28.24■■■□□ 2.11
SF1-214ENST00000477596 C6orf229H3BNL8 230 aa28.23■■■□□ 2.11
SF1-214ENST00000477596 TBC1D16Q8TBP0 767 aa28.23■■■□□ 2.11
SF1-214ENST00000477596 API5Q9BZZ5 524 aaKnown RBP28.23■■■□□ 2.11
SF1-214ENST00000477596 USP44Q9H0E7 712 aa28.22■■■□□ 2.11
SF1-214ENST00000477596 BSDC1Q9NW68 430 aaPredicted RBP28.22■■■□□ 2.11
SF1-214ENST00000477596 PODXL2Q9NZ53 605 aa28.22■■■□□ 2.11
SF1-214ENST00000477596 ANKIB1Q9P2G1 1089 aa28.22■■■□□ 2.11
SF1-214ENST00000477596 RIMBP2O15034 1052 aa28.21■■■□□ 2.11
SF1-214ENST00000477596 UFL1O94874 794 aa28.21■■■□□ 2.11
SF1-214ENST00000477596 VPS33BQ9H267 617 aa28.21■■■□□ 2.11
SF1-214ENST00000477596 WTIPA6NIX2 430 aaPredicted RBP28.2■■■□□ 2.1
SF1-214ENST00000477596 IGHMBP2P38935 993 aaKnown RBP28.2■■■□□ 2.1
SF1-214ENST00000477596 FRAT1Q92837 279 aaPredicted RBP28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms