RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 ABT1Q9ULW3 272 aaKnown RBP17.07■□□□□ 0.32
PABPC4-212ENST00000477556 LTBP1Q14766 1721 aa17.07■□□□□ 0.32
PABPC4-212ENST00000477556 FOXN1O15353 648 aa17.06■□□□□ 0.32
PABPC4-212ENST00000477556 CXCL9Q07325 125 aa17.06■□□□□ 0.32
PABPC4-212ENST00000477556 HYPKQ9NX55 129 aa17.06■□□□□ 0.32
PABPC4-212ENST00000477556 CTCFP49711 727 aaPredicted RBP17.05■□□□□ 0.32
PABPC4-212ENST00000477556 KIAA2012Q0VF49 1180 aa17.05■□□□□ 0.32
PABPC4-212ENST00000477556 DUSP27Q5VZP5 1158 aa17.05■□□□□ 0.32
PABPC4-212ENST00000477556 CIAPIN1Q6FI81 312 aa17.05■□□□□ 0.32
PABPC4-212ENST00000477556 ISCA1Q9BUE6 129 aa17.05■□□□□ 0.32
PABPC4-212ENST00000477556 GPRC5DQ9NZD1 345 aa17.05■□□□□ 0.32
PABPC4-212ENST00000477556 LAMB2P55268 1798 aa17.05■□□□□ 0.32
PABPC4-212ENST00000477556 TNIP1Q15025 636 aa17.04■□□□□ 0.32
PABPC4-212ENST00000477556 ZNF428Q96B54 188 aa17.04■□□□□ 0.32
PABPC4-212ENST00000477556 PRDM10Q9NQV6 1147 aa17.04■□□□□ 0.32
PABPC4-212ENST00000477556 CDHR2Q9BYE9 1310 aa17.03■□□□□ 0.32
PABPC4-212ENST00000477556 ATP5J2-PTCD1G3V325 749 aa17.03■□□□□ 0.32
PABPC4-212ENST00000477556 GMPSP49915 693 aaPredicted RBP17.03■□□□□ 0.32
PABPC4-212ENST00000477556 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
PABPC4-212ENST00000477556 FAM89AQ96GI7 184 aa17.03■□□□□ 0.32
PABPC4-212ENST00000477556 BCL2L13Q9BXK5 485 aa17.03■□□□□ 0.32
PABPC4-212ENST00000477556 PRKRIP1Q9H875 184 aaPredicted RBP17.03■□□□□ 0.32
PABPC4-212ENST00000477556 MBIPQ9NS73 344 aa17.03■□□□□ 0.32
PABPC4-212ENST00000477556 WBP1LQ9NX94 342 aa17.03■□□□□ 0.32
PABPC4-212ENST00000477556 WDR33Q9C0J8 1336 aaKnown RBP17.02■□□□□ 0.32
PABPC4-212ENST00000477556 RAD17O75943 681 aa17.02■□□□□ 0.32
PABPC4-212ENST00000477556 SF3B3Q15393 1217 aaKnown RBP17.02■□□□□ 0.32
PABPC4-212ENST00000477556 PCNTO95613 3336 aa17.01■□□□□ 0.31
PABPC4-212ENST00000477556 TRAF5O00463 557 aa17.01■□□□□ 0.31
PABPC4-212ENST00000477556 ECE1P42892 770 aa17.01■□□□□ 0.31
PABPC4-212ENST00000477556 MAP2K1Q02750 393 aaPredicted RBP17.01■□□□□ 0.31
PABPC4-212ENST00000477556 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
PABPC4-212ENST00000477556 TRIM28Q13263 835 aaKnown RBP17.01■□□□□ 0.31
PABPC4-212ENST00000477556 PAXIP1Q6ZW49 1069 aaPredicted RBP17.01■□□□□ 0.31
PABPC4-212ENST00000477556 IFT57Q9NWB7 429 aa17.01■□□□□ 0.31
PABPC4-212ENST00000477556 APAF1O14727 1248 aa17■□□□□ 0.31
PABPC4-212ENST00000477556 ZNF853P0CG23 659 aa17■□□□□ 0.31
PABPC4-212ENST00000477556 GNAI1P63096 354 aa17■□□□□ 0.31
PABPC4-212ENST00000477556 FMR1Q06787 632 aaKnown RBP eCLIP17■□□□□ 0.316e-7■□□□□ 10.3
PABPC4-212ENST00000477556 RTL5Q5HYW3 569 aaPredicted RBP17■□□□□ 0.31
PABPC4-212ENST00000477556 RIC3Q7Z5B4 369 aa17■□□□□ 0.31
PABPC4-212ENST00000477556 NSFL1CQ9UNZ2 370 aaKnown RBP17■□□□□ 0.31
PABPC4-212ENST00000477556 IRS4O14654 1257 aaPredicted RBP16.99■□□□□ 0.31
PABPC4-212ENST00000477556 HSP90B1P14625 803 aaKnown RBP16.99■□□□□ 0.31
PABPC4-212ENST00000477556 WASHC4Q2M389 1173 aa16.99■□□□□ 0.31
PABPC4-212ENST00000477556 ZC3H15Q8WU90 426 aaKnown RBP16.99■□□□□ 0.31
PABPC4-212ENST00000477556 CELF1Q92879 486 aaKnown RBP16.99■□□□□ 0.31
PABPC4-212ENST00000477556 CAPNS2Q96L46 248 aa16.99■□□□□ 0.31
PABPC4-212ENST00000477556 DDX60Q8IY21 1712 aaKnown RBP16.99■□□□□ 0.31
PABPC4-212ENST00000477556 YDJCA8MPS7 323 aa16.98■□□□□ 0.31
PABPC4-212ENST00000477556 C6orf229H3BNL8 230 aa16.98■□□□□ 0.31
PABPC4-212ENST00000477556 H7C1D1 291 aa16.98■□□□□ 0.31
PABPC4-212ENST00000477556 LBX1P52954 281 aa16.98■□□□□ 0.31
PABPC4-212ENST00000477556 CST9Q5W186 159 aa16.98■□□□□ 0.31
PABPC4-212ENST00000477556 CHMP4AQ9BY43 222 aa16.98■□□□□ 0.31
PABPC4-212ENST00000477556 CNOT7Q9UIV1 285 aaKnown RBP16.98■□□□□ 0.31
PABPC4-212ENST00000477556 TLL2Q9Y6L7 1015 aa16.98■□□□□ 0.31
PABPC4-212ENST00000477556 TAF1P21675 1872 aa16.98■□□□□ 0.31
PABPC4-212ENST00000477556 TRPM7Q96QT4 1865 aa16.97■□□□□ 0.31
PABPC4-212ENST00000477556 LRRC37AA6NMS7 1700 aa16.97■□□□□ 0.31
PABPC4-212ENST00000477556 ELL2O00472 640 aaPredicted RBP16.97■□□□□ 0.31
PABPC4-212ENST00000477556 GRM1Q13255 1194 aa16.97■□□□□ 0.31
PABPC4-212ENST00000477556 CYP4F22Q6NT55 531 aa16.97■□□□□ 0.31
PABPC4-212ENST00000477556 ZBTB38Q8NAP3 1195 aaPredicted RBP16.97■□□□□ 0.31
PABPC4-212ENST00000477556 EYA3Q99504 573 aa16.97■□□□□ 0.31
PABPC4-212ENST00000477556 BEGAINQ9BUH8 593 aa16.97■□□□□ 0.31
PABPC4-212ENST00000477556 PGAP2Q9UHJ9 254 aa16.97■□□□□ 0.31
PABPC4-212ENST00000477556 DUOX1Q9NRD9 1551 aa16.97■□□□□ 0.31
PABPC4-212ENST00000477556 RIMBP2O15034 1052 aa16.96■□□□□ 0.31
PABPC4-212ENST00000477556 CELF2O95319 508 aaKnown RBP16.96■□□□□ 0.31
PABPC4-212ENST00000477556 HSPA8P11142 646 aaKnown RBP16.96■□□□□ 0.31
PABPC4-212ENST00000477556 RPS8P62241 208 aaKnown RBP16.96■□□□□ 0.31
PABPC4-212ENST00000477556 GPSM2P81274 684 aa16.96■□□□□ 0.31
PABPC4-212ENST00000477556 GPR101Q96P66 508 aaPredicted RBP16.96■□□□□ 0.31
PABPC4-212ENST00000477556 GLIS2Q9BZE0 524 aaPredicted RBP16.96■□□□□ 0.31
PABPC4-212ENST00000477556 PHAXQ9H814 394 aaKnown RBP16.96■□□□□ 0.31
PABPC4-212ENST00000477556 DBNDD1Q9H9R9 158 aa16.96■□□□□ 0.31
PABPC4-212ENST00000477556 CDC37L1Q7L3B6 337 aa16.95■□□□□ 0.3
PABPC4-212ENST00000477556 MICALL2Q8IY33 904 aa16.95■□□□□ 0.3
PABPC4-212ENST00000477556 CCDC191Q8NCU4 936 aa16.95■□□□□ 0.3
PABPC4-212ENST00000477556 TRPM4Q8TD43 1214 aa16.95■□□□□ 0.3
PABPC4-212ENST00000477556 DPF2Q92785 391 aa16.95■□□□□ 0.3
PABPC4-212ENST00000477556 MYD88Q99836 296 aa16.95■□□□□ 0.3
PABPC4-212ENST00000477556 POLLQ9UGP5 575 aa16.95■□□□□ 0.3
PABPC4-212ENST00000477556 PSMD14O00487 310 aa16.94■□□□□ 0.3
PABPC4-212ENST00000477556 DDX58O95786 925 aaKnown RBP16.94■□□□□ 0.3
PABPC4-212ENST00000477556 HIRAP54198 1017 aaPredicted RBP16.94■□□□□ 0.3
PABPC4-212ENST00000477556 CCDC30Q5VVM6 783 aa16.94■□□□□ 0.3
PABPC4-212ENST00000477556 ZNF408Q9H9D4 720 aa16.94■□□□□ 0.3
PABPC4-212ENST00000477556 ZBTB12Q9Y330 459 aaPredicted RBP16.94■□□□□ 0.3
PABPC4-212ENST00000477556 ECE2O60344 883 aa16.93■□□□□ 0.3
PABPC4-212ENST00000477556 PCCAP05165 728 aaPredicted RBP16.93■□□□□ 0.3
PABPC4-212ENST00000477556 RPS12P25398 132 aaKnown RBP16.93■□□□□ 0.3
PABPC4-212ENST00000477556 MAP2K2P36507 400 aa16.93■□□□□ 0.3
PABPC4-212ENST00000477556 CCDC152Q4G0S7 254 aa16.93■□□□□ 0.3
PABPC4-212ENST00000477556 SAPCD2Q86UD0 394 aa16.93■□□□□ 0.3
PABPC4-212ENST00000477556 C8orf58Q8NAV2 365 aa16.93■□□□□ 0.3
PABPC4-212ENST00000477556 TBC1D16Q8TBP0 767 aa16.93■□□□□ 0.3
PABPC4-212ENST00000477556 ZC3H12CQ9C0D7 883 aaKnown RBP16.93■□□□□ 0.3
PABPC4-212ENST00000477556 CWC25Q9NXE8 425 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms