RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 DNAJC5GQ8N7S2 189 aa22.3■■□□□ 1.16
SREBF1-211ENST00000476994 UBN2Q6ZU65 1347 aa22.3■■□□□ 1.16
SREBF1-211ENST00000476994 DDX60Q8IY21 1712 aaKnown RBP22.29■■□□□ 1.16
SREBF1-211ENST00000476994 FAM177BA6PVY3 158 aa22.29■■□□□ 1.16
SREBF1-211ENST00000476994 NEURL1BA8MQ27 555 aa22.29■■□□□ 1.16
SREBF1-211ENST00000476994 ALDH1L1O75891 902 aa22.29■■□□□ 1.16
SREBF1-211ENST00000476994 MVPQ14764 893 aaKnown RBP22.29■■□□□ 1.16
SREBF1-211ENST00000476994 CWF19L2Q2TBE0 894 aaKnown RBP22.29■■□□□ 1.16
SREBF1-211ENST00000476994 HSP90AB3PQ58FF7 597 aa22.29■■□□□ 1.16
SREBF1-211ENST00000476994 COG6Q9Y2V7 657 aa22.29■■□□□ 1.16
SREBF1-211ENST00000476994 ATP5J2-PTCD1G3V325 749 aa22.28■■□□□ 1.16
SREBF1-211ENST00000476994 CCDC93Q567U6 631 aa22.28■■□□□ 1.16
SREBF1-211ENST00000476994 CRBNQ96SW2 442 aa22.28■■□□□ 1.16
SREBF1-211ENST00000476994 SRCIN1Q9C0H9 1055 aa22.28■■□□□ 1.16
SREBF1-211ENST00000476994 NYXQ9GZU5 481 aa22.28■■□□□ 1.16
SREBF1-211ENST00000476994 ALDH1B1P30837 517 aa22.27■■□□□ 1.16
SREBF1-211ENST00000476994 KLRG1Q96E93 195 aa22.27■■□□□ 1.16
SREBF1-211ENST00000476994 IRX6P78412 446 aaPredicted RBP22.26■■□□□ 1.15
SREBF1-211ENST00000476994 NEXNQ0ZGT2 675 aa22.26■■□□□ 1.15
SREBF1-211ENST00000476994 NLRP10Q86W26 655 aa22.26■■□□□ 1.15
SREBF1-211ENST00000476994 GPTP24298 496 aa22.25■■□□□ 1.15
SREBF1-211ENST00000476994 GCKRQ14397 625 aa22.25■■□□□ 1.15
SREBF1-211ENST00000476994 ITPRIPQ8IWB1 547 aa22.25■■□□□ 1.15
SREBF1-211ENST00000476994 CCDC191Q8NCU4 936 aa22.25■■□□□ 1.15
SREBF1-211ENST00000476994 UTYO14607 1347 aa22.25■■□□□ 1.15
SREBF1-211ENST00000476994 ZBTB7BO15156 539 aaPredicted RBP22.24■■□□□ 1.15
SREBF1-211ENST00000476994 RTKN2Q8IZC4 609 aa22.24■■□□□ 1.15
SREBF1-211ENST00000476994 USP44Q9H0E7 712 aa22.24■■□□□ 1.15
SREBF1-211ENST00000476994 SCN4AP35499 1836 aa22.23■■□□□ 1.15
SREBF1-211ENST00000476994 KLRG2A4D1S0 409 aaPredicted RBP22.23■■□□□ 1.15
SREBF1-211ENST00000476994 CASP7P55210 303 aa22.23■■□□□ 1.15
SREBF1-211ENST00000476994 HTRA3P83110 453 aa22.23■■□□□ 1.15
SREBF1-211ENST00000476994 MEIS3Q99687 375 aa22.23■■□□□ 1.15
SREBF1-211ENST00000476994 CWC25Q9NXE8 425 aaPredicted RBP22.23■■□□□ 1.15
SREBF1-211ENST00000476994 IQCA1LA6NCM1 817 aa22.22■■□□□ 1.15
SREBF1-211ENST00000476994 PARP10Q53GL7 1025 aa22.22■■□□□ 1.15
SREBF1-211ENST00000476994 EXOC6Q8TAG9 804 aa22.22■■□□□ 1.15
SREBF1-211ENST00000476994 DDX19BQ9UMR2 479 aa22.22■■□□□ 1.15
SREBF1-211ENST00000476994 NTSR2O95665 410 aa22.21■■□□□ 1.15
SREBF1-211ENST00000476994 FKBP4Q02790 459 aaKnown RBP eCLIP22.21■■□□□ 1.15
SREBF1-211ENST00000476994 SUSD4Q5VX71 490 aa22.21■■□□□ 1.15
SREBF1-211ENST00000476994 H7C1W4 665 aa22.2■■□□□ 1.14
SREBF1-211ENST00000476994 GRM8O00222 908 aa22.2■■□□□ 1.14
SREBF1-211ENST00000476994 ZBTB40Q9NUA8 1239 aa22.2■■□□□ 1.14
SREBF1-211ENST00000476994 DDNO94850 711 aaPredicted RBP22.19■■□□□ 1.14
SREBF1-211ENST00000476994 NBPF7P0C2Y1 421 aaPredicted RBP22.19■■□□□ 1.14
SREBF1-211ENST00000476994 C7orf43Q8WVR3 580 aa22.19■■□□□ 1.14
SREBF1-211ENST00000476994 RPGRQ92834 1020 aaKnown RBP22.19■■□□□ 1.14
SREBF1-211ENST00000476994 PCCAP05165 728 aaPredicted RBP22.18■■□□□ 1.14
SREBF1-211ENST00000476994 JMYQ8N9B5 988 aa22.18■■□□□ 1.14
SREBF1-211ENST00000476994 POTECB2RU33 542 aa22.17■■□□□ 1.14
SREBF1-211ENST00000476994 CC2D2BQ6DHV5 1058 aa22.17■■□□□ 1.14
SREBF1-211ENST00000476994 CHADLQ6NUI6 762 aa22.17■■□□□ 1.14
SREBF1-211ENST00000476994 NUTM1Q86Y26 1132 aa22.17■■□□□ 1.14
SREBF1-211ENST00000476994 ZBTB38Q8NAP3 1195 aaPredicted RBP22.17■■□□□ 1.14
SREBF1-211ENST00000476994 KAZALD1Q96I82 304 aa22.17■■□□□ 1.14
SREBF1-211ENST00000476994 CDHR2Q9BYE9 1310 aa22.16■■□□□ 1.14
SREBF1-211ENST00000476994 GRIPAP1Q4V328 841 aa22.16■■□□□ 1.14
SREBF1-211ENST00000476994 PPP1R42Q7Z4L9 355 aa22.16■■□□□ 1.14
SREBF1-211ENST00000476994 SYNE4Q8N205 404 aa22.16■■□□□ 1.14
SREBF1-211ENST00000476994 JARID2Q92833 1246 aaPredicted RBP22.16■■□□□ 1.14
SREBF1-211ENST00000476994 UTP14AQ9BVJ6 771 aaKnown RBP22.16■■□□□ 1.14
SREBF1-211ENST00000476994 TMX4Q9H1E5 349 aaPredicted RBP22.16■■□□□ 1.14
SREBF1-211ENST00000476994 ZNF277Q9NRM2 450 aaPredicted RBP22.16■■□□□ 1.14
SREBF1-211ENST00000476994 RIC1Q4ADV7 1423 aa22.15■■□□□ 1.14
SREBF1-211ENST00000476994 ABCC12Q96J65 1359 aa22.15■■□□□ 1.14
SREBF1-211ENST00000476994 UBE3BQ7Z3V4 1068 aa22.15■■□□□ 1.14
SREBF1-211ENST00000476994 JDP2Q8WYK2 163 aa22.15■■□□□ 1.14
SREBF1-211ENST00000476994 C9orf78Q9NZ63 289 aaPredicted RBP22.15■■□□□ 1.14
SREBF1-211ENST00000476994 GNAI3P08754 354 aa22.14■■□□□ 1.13
SREBF1-211ENST00000476994 IARSP41252 1262 aaKnown RBP22.14■■□□□ 1.13
SREBF1-211ENST00000476994 CRY2Q49AN0 593 aa22.14■■□□□ 1.13
SREBF1-211ENST00000476994 FAM89AQ96GI7 184 aa22.14■■□□□ 1.13
SREBF1-211ENST00000476994 RBM17Q96I25 401 aaKnown RBP22.14■■□□□ 1.13
SREBF1-211ENST00000476994 SUCLG2Q96I99 432 aa22.14■■□□□ 1.13
SREBF1-211ENST00000476994 TRMT112Q9UI30 125 aaKnown RBP22.14■■□□□ 1.13
SREBF1-211ENST00000476994 SH3TC1Q8TE82 1336 aa22.13■■□□□ 1.13
SREBF1-211ENST00000476994 NEFLP07196 543 aa22.13■■□□□ 1.13
SREBF1-211ENST00000476994 UBTFL1P0CB47 393 aaPredicted RBP22.13■■□□□ 1.13
SREBF1-211ENST00000476994 L3MBTL3Q96JM7 780 aaPredicted RBP22.13■■□□□ 1.13
SREBF1-211ENST00000476994 PLA2G12BQ9BX93 195 aa22.13■■□□□ 1.13
SREBF1-211ENST00000476994 TAF1P21675 1872 aa22.13■■□□□ 1.13
SREBF1-211ENST00000476994 EPHA10Q5JZY3 1008 aa22.12■■□□□ 1.13
SREBF1-211ENST00000476994 LDHDQ86WU2 507 aa22.12■■□□□ 1.13
SREBF1-211ENST00000476994 PSMD1Q99460 953 aa22.12■■□□□ 1.13
SREBF1-211ENST00000476994 C1orf115Q9H7X2 142 aa22.12■■□□□ 1.13
SREBF1-211ENST00000476994 AAMPQ13685 434 aa22.11■■□□□ 1.13
SREBF1-211ENST00000476994 RTL5Q5HYW3 569 aaPredicted RBP22.11■■□□□ 1.13
SREBF1-211ENST00000476994 SLC10A5Q5PT55 438 aa22.11■■□□□ 1.13
SREBF1-211ENST00000476994 OLFM4Q6UX06 510 aa22.11■■□□□ 1.13
SREBF1-211ENST00000476994 NLRP3Q96P20 1036 aa22.11■■□□□ 1.13
SREBF1-211ENST00000476994 CHMP4BQ9H444 224 aaKnown RBP22.11■■□□□ 1.13
SREBF1-211ENST00000476994 HACL1Q9UJ83 578 aa22.11■■□□□ 1.13
SREBF1-211ENST00000476994 LRRFIP2Q9Y608 721 aaKnown RBP22.11■■□□□ 1.13
SREBF1-211ENST00000476994 PCNTO95613 3336 aa22.1■■□□□ 1.13
SREBF1-211ENST00000476994 GNAI2P04899 355 aa22.1■■□□□ 1.13
SREBF1-211ENST00000476994 HOXA10P31260 410 aaPredicted RBP22.1■■□□□ 1.13
SREBF1-211ENST00000476994 FOXO4P98177 505 aa22.1■■□□□ 1.13
SREBF1-211ENST00000476994 ANKRD44Q8N8A2 993 aa22.1■■□□□ 1.13
SREBF1-211ENST00000476994 CRAMP1Q96RY5 1269 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms