RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 BTBD6Q96KE9 485 aa6.06□□□□□ -1.44
NPHP3-207ENST00000476742 BRD7Q9NPI1 651 aa6.06□□□□□ -1.44
NPHP3-207ENST00000476742 LRFN2Q9ULH4 789 aa6.06□□□□□ -1.44
NPHP3-207ENST00000476742 ARID4AP29374 1257 aaPredicted RBP6.05□□□□□ -1.44
NPHP3-207ENST00000476742 TYRO3Q06418 890 aa6.05□□□□□ -1.44
NPHP3-207ENST00000476742 FAM182BQ5T319 152 aa6.05□□□□□ -1.44
NPHP3-207ENST00000476742 SAP130Q9H0E3 1048 aa6.05□□□□□ -1.44
NPHP3-207ENST00000476742 SEPT3Q9UH03 358 aa6.05□□□□□ -1.44
NPHP3-207ENST00000476742 KCNH4Q9UQ05 1017 aa6.05□□□□□ -1.44
NPHP3-207ENST00000476742 EFSO43281 561 aa6.04□□□□□ -1.44
NPHP3-207ENST00000476742 MICAL2O94851 1124 aa6.04□□□□□ -1.44
NPHP3-207ENST00000476742 CD33P20138 364 aa6.04□□□□□ -1.44
NPHP3-207ENST00000476742 IDH3AP50213 366 aa6.04□□□□□ -1.44
NPHP3-207ENST00000476742 ARSDP51689 593 aa6.04□□□□□ -1.44
NPHP3-207ENST00000476742 NEUROD1Q13562 356 aa6.04□□□□□ -1.44
NPHP3-207ENST00000476742 PHLDB3Q6NSJ2 640 aa6.04□□□□□ -1.44
NPHP3-207ENST00000476742 SLCO4C1Q6ZQN7 724 aa6.04□□□□□ -1.44
NPHP3-207ENST00000476742 ABTB2Q8N961 1025 aa6.04□□□□□ -1.44
NPHP3-207ENST00000476742 FAM13BQ9NYF5 915 aa6.04□□□□□ -1.44
NPHP3-207ENST00000476742 STIM2Q9P246 746 aa6.04□□□□□ -1.44
NPHP3-207ENST00000476742 PRR12Q9ULL5 1215 aa6.04□□□□□ -1.44
NPHP3-207ENST00000476742 RNF112Q9ULX5 631 aa6.04□□□□□ -1.44
NPHP3-207ENST00000476742 BCS1LQ9Y276 419 aa6.04□□□□□ -1.44
NPHP3-207ENST00000476742 KRTAP9-7A8MTY7 169 aa6.03□□□□□ -1.44
NPHP3-207ENST00000476742 BRD1O95696 1058 aa6.03□□□□□ -1.44
NPHP3-207ENST00000476742 CTBSQ01459 385 aa6.03□□□□□ -1.44
NPHP3-207ENST00000476742 SFSWAPQ12872 951 aaKnown RBP6.03□□□□□ -1.44
NPHP3-207ENST00000476742 TREML1Q86YW5 311 aa6.03□□□□□ -1.44
NPHP3-207ENST00000476742 HELQQ8TDG4 1101 aa6.03□□□□□ -1.44
NPHP3-207ENST00000476742 GTF3C2Q8WUA4 911 aaPredicted RBP6.03□□□□□ -1.44
NPHP3-207ENST00000476742 ABL1P00519 1130 aa6.02□□□□□ -1.45
NPHP3-207ENST00000476742 INPP5BP32019 993 aa6.02□□□□□ -1.45
NPHP3-207ENST00000476742 SCNN1AP37088 669 aa6.02□□□□□ -1.45
NPHP3-207ENST00000476742 KCNQ4P56696 695 aa6.02□□□□□ -1.45
NPHP3-207ENST00000476742 AVENQ9NQS1 362 aaPredicted RBP6.02□□□□□ -1.45
NPHP3-207ENST00000476742 STRN4Q9NRL3 753 aa6.02□□□□□ -1.45
NPHP3-207ENST00000476742 DMGDHQ9UI17 866 aaKnown RBP6.02□□□□□ -1.45
NPHP3-207ENST00000476742 TNFRSF10BO14763 440 aa6.01□□□□□ -1.45
NPHP3-207ENST00000476742 ARAFP10398 606 aa6.01□□□□□ -1.45
NPHP3-207ENST00000476742 PDIA4P13667 645 aaKnown RBP6.01□□□□□ -1.45
NPHP3-207ENST00000476742 SPEM2Q0P670 501 aa6.01□□□□□ -1.45
NPHP3-207ENST00000476742 SF3B2Q13435 895 aaKnown RBP6.01□□□□□ -1.45
NPHP3-207ENST00000476742 ETFBKMTQ8IXQ9 262 aa6.01□□□□□ -1.45
NPHP3-207ENST00000476742 PNMA5Q96PV4 448 aa6.01□□□□□ -1.45
NPHP3-207ENST00000476742 TRAIPQ9BWF2 469 aa6.01□□□□□ -1.45
NPHP3-207ENST00000476742 EFCC1Q9HA90 598 aa6.01□□□□□ -1.45
NPHP3-207ENST00000476742 C11orf16Q9NQ32 467 aa6.01□□□□□ -1.45
NPHP3-207ENST00000476742 C2CD2LO14523 706 aa6□□□□□ -1.45
NPHP3-207ENST00000476742 ADH6P28332 368 aa6□□□□□ -1.45
NPHP3-207ENST00000476742 FBLN7Q53RD9 439 aa6□□□□□ -1.45
NPHP3-207ENST00000476742 ALKBH2Q6NS38 261 aa6□□□□□ -1.45
NPHP3-207ENST00000476742 RGL4Q8IZJ4 473 aa6□□□□□ -1.45
NPHP3-207ENST00000476742 PIK3R5Q8WYR1 880 aa6□□□□□ -1.45
NPHP3-207ENST00000476742 EGFL7Q9UHF1 273 aa6□□□□□ -1.45
NPHP3-207ENST00000476742 OPLAHO14841 1288 aa5.99□□□□□ -1.45
NPHP3-207ENST00000476742 FAM13AO94988 1023 aa5.99□□□□□ -1.45
NPHP3-207ENST00000476742 ZAP70P43403 619 aa5.99□□□□□ -1.45
NPHP3-207ENST00000476742 FKBP4Q02790 459 aaKnown RBP eCLIP5.99□□□□□ -1.45
NPHP3-207ENST00000476742 AAMPQ13685 434 aa5.99□□□□□ -1.45
NPHP3-207ENST00000476742 CCINQ13939 588 aa5.99□□□□□ -1.45
NPHP3-207ENST00000476742 NOM1Q5C9Z4 860 aaKnown RBP5.99□□□□□ -1.45
NPHP3-207ENST00000476742 ZNF468Q5VIY5 522 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-207ENST00000476742 CMTR1Q8N1G2 835 aaKnown RBP5.99□□□□□ -1.45
NPHP3-207ENST00000476742 TTC16Q8NEE8 873 aa5.99□□□□□ -1.45
NPHP3-207ENST00000476742 TRIM11Q96F44 468 aa5.99□□□□□ -1.45
NPHP3-207ENST00000476742 PCMTD2Q9NV79 361 aa5.99□□□□□ -1.45
NPHP3-207ENST00000476742 FNDC3AQ9Y2H6 1198 aaKnown RBP5.99□□□□□ -1.45
NPHP3-207ENST00000476742 RTCBQ9Y3I0 505 aaKnown RBP5.99□□□□□ -1.45
NPHP3-207ENST00000476742 PATL2C9JE40 543 aaKnown RBP5.98□□□□□ -1.45
NPHP3-207ENST00000476742 APBA3O96018 575 aa5.98□□□□□ -1.45
NPHP3-207ENST00000476742 EPXP11678 715 aa5.98□□□□□ -1.45
NPHP3-207ENST00000476742 PCSK2P16519 638 aa5.98□□□□□ -1.45
NPHP3-207ENST00000476742 MPSTP25325 297 aa5.98□□□□□ -1.45
NPHP3-207ENST00000476742 PCBP4P57723 403 aaKnown RBP5.98□□□□□ -1.45
NPHP3-207ENST00000476742 SYT9Q86SS6 491 aa5.98□□□□□ -1.45
NPHP3-207ENST00000476742 TXNDC2Q86VQ3 553 aa5.98□□□□□ -1.45
NPHP3-207ENST00000476742 BHMTQ93088 406 aa5.98□□□□□ -1.45
NPHP3-207ENST00000476742 SLC30A3Q99726 388 aa5.98□□□□□ -1.45
NPHP3-207ENST00000476742 PLVAPQ9BX97 442 aa5.98□□□□□ -1.45
NPHP3-207ENST00000476742 GGA1Q9UJY5 639 aa5.98□□□□□ -1.45
NPHP3-207ENST00000476742 HCN2Q9UL51 889 aa5.98□□□□□ -1.45
NPHP3-207ENST00000476742 NEURL1BA8MQ27 555 aa5.97□□□□□ -1.45
NPHP3-207ENST00000476742 ZBTB39O15060 712 aa5.97□□□□□ -1.45
NPHP3-207ENST00000476742 SIN3BO75182 1162 aa5.97□□□□□ -1.45
NPHP3-207ENST00000476742 RPLP1P05386 114 aaKnown RBP5.97□□□□□ -1.45
NPHP3-207ENST00000476742 SERPINB4P48594 390 aa5.97□□□□□ -1.45
NPHP3-207ENST00000476742 KCNA1Q09470 495 aa5.97□□□□□ -1.45
NPHP3-207ENST00000476742 ZNF211Q13398 564 aaPredicted RBP5.97□□□□□ -1.45
NPHP3-207ENST00000476742 MTMR3Q13615 1198 aa5.97□□□□□ -1.45
NPHP3-207ENST00000476742 GLYCTKQ8IVS8 523 aa5.97□□□□□ -1.45
NPHP3-207ENST00000476742 GPR152Q8TDT2 470 aa5.97□□□□□ -1.45
NPHP3-207ENST00000476742 GSX2Q9BZM3 304 aa5.97□□□□□ -1.45
NPHP3-207ENST00000476742 ANO2Q9NQ90 1003 aa5.97□□□□□ -1.45
NPHP3-207ENST00000476742 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.97□□□□□ -1.45
NPHP3-207ENST00000476742 ICMTO60725 284 aa5.96□□□□□ -1.46
NPHP3-207ENST00000476742 XYLBO75191 536 aa5.96□□□□□ -1.46
NPHP3-207ENST00000476742 NPR3P17342 541 aa5.96□□□□□ -1.46
NPHP3-207ENST00000476742 ALAS2P22557 587 aa5.96□□□□□ -1.46
NPHP3-207ENST00000476742 EIF1AXP47813 144 aaKnown RBP5.96□□□□□ -1.46
NPHP3-207ENST00000476742 FAM26DQ5JW98 314 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms