RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 EAPPQ56P03 285 aaPredicted RBP20.86■□□□□ 0.93
COL1A1-205ENST00000476387 ADAMTSL1Q8N6G6 1762 aa20.85■□□□□ 0.93
COL1A1-205ENST00000476387 CACNA1FO60840 1977 aa20.85■□□□□ 0.93
COL1A1-205ENST00000476387 CCDC30Q5VVM6 783 aa20.85■□□□□ 0.93
COL1A1-205ENST00000476387 DPP8Q6V1X1 898 aaPredicted RBP20.85■□□□□ 0.93
COL1A1-205ENST00000476387 PCNTO95613 3336 aa20.85■□□□□ 0.93
COL1A1-205ENST00000476387 ATP5J2-PTCD1G3V325 749 aa20.84■□□□□ 0.93
COL1A1-205ENST00000476387 LMOD1P29536 600 aaPredicted RBP20.84■□□□□ 0.93
COL1A1-205ENST00000476387 SF3B3Q15393 1217 aaKnown RBP20.84■□□□□ 0.93
COL1A1-205ENST00000476387 AOC3Q16853 763 aa20.84■□□□□ 0.93
COL1A1-205ENST00000476387 WDR63Q8IWG1 891 aa20.84■□□□□ 0.93
COL1A1-205ENST00000476387 MPNDQ8N594 471 aa20.84■□□□□ 0.93
COL1A1-205ENST00000476387 FAM89AQ96GI7 184 aa20.84■□□□□ 0.93
COL1A1-205ENST00000476387 GJA3Q9Y6H8 435 aa20.84■□□□□ 0.93
COL1A1-205ENST00000476387 DDX60Q8IY21 1712 aaKnown RBP20.84■□□□□ 0.93
COL1A1-205ENST00000476387 ITGBL1O95965 494 aaPredicted RBP20.83■□□□□ 0.93
COL1A1-205ENST00000476387 RIC3Q7Z5B4 369 aa20.83■□□□□ 0.93
COL1A1-205ENST00000476387 FANCIQ9NVI1 1328 aa20.82■□□□□ 0.92
COL1A1-205ENST00000476387 TSPYL6Q8N831 410 aa20.82■□□□□ 0.92
COL1A1-205ENST00000476387 PHAXQ9H814 394 aaKnown RBP20.82■□□□□ 0.92
COL1A1-205ENST00000476387 ZNRF3Q9ULT6 936 aa20.82■□□□□ 0.92
COL1A1-205ENST00000476387 CLEC11AQ9Y240 323 aa20.82■□□□□ 0.92
COL1A1-205ENST00000476387 HSP90B1P14625 803 aaKnown RBP20.81■□□□□ 0.92
COL1A1-205ENST00000476387 SCNN1DP51172 638 aa20.81■□□□□ 0.92
COL1A1-205ENST00000476387 KIAA2012Q0VF49 1180 aa20.81■□□□□ 0.92
COL1A1-205ENST00000476387 TWISTNBQ3B726 338 aaPredicted RBP20.81■□□□□ 0.92
COL1A1-205ENST00000476387 STK31Q9BXU1 1019 aa20.81■□□□□ 0.92
COL1A1-205ENST00000476387 IRS4O14654 1257 aaPredicted RBP20.8■□□□□ 0.92
COL1A1-205ENST00000476387 ZBTB38Q8NAP3 1195 aaPredicted RBP20.8■□□□□ 0.92
COL1A1-205ENST00000476387 ZNF428Q96B54 188 aa20.8■□□□□ 0.92
COL1A1-205ENST00000476387 LRRC37AA6NMS7 1700 aa20.8■□□□□ 0.92
COL1A1-205ENST00000476387 LTBP1Q14766 1721 aa20.79■□□□□ 0.92
COL1A1-205ENST00000476387 DDX58O95786 925 aaKnown RBP20.79■□□□□ 0.92
COL1A1-205ENST00000476387 EPS15P42566 896 aa20.79■□□□□ 0.92
COL1A1-205ENST00000476387 CNTROBQ8N137 903 aa20.79■□□□□ 0.92
COL1A1-205ENST00000476387 CCDC191Q8NCU4 936 aa20.79■□□□□ 0.92
COL1A1-205ENST00000476387 TAF1P21675 1872 aa20.78■□□□□ 0.92
COL1A1-205ENST00000476387 TMEM88BA6NKF7 163 aa20.78■□□□□ 0.92
COL1A1-205ENST00000476387 CCER2I3L3R5 266 aa20.78■□□□□ 0.92
COL1A1-205ENST00000476387 CXCL9Q07325 125 aa20.78■□□□□ 0.92
COL1A1-205ENST00000476387 USP50Q70EL3 339 aaPredicted RBP20.78■□□□□ 0.92
COL1A1-205ENST00000476387 MYH16Q9H6N6 1097 aa20.78■□□□□ 0.92
COL1A1-205ENST00000476387 DUOX1Q9NRD9 1551 aa20.77■□□□□ 0.92
COL1A1-205ENST00000476387 CNTNAP1P78357 1384 aa20.77■□□□□ 0.92
COL1A1-205ENST00000476387 RTL5Q5HYW3 569 aaPredicted RBP20.77■□□□□ 0.92
COL1A1-205ENST00000476387 MAP1SQ66K74 1059 aaPredicted RBP20.77■□□□□ 0.92
COL1A1-205ENST00000476387 CELF1Q92879 486 aaKnown RBP20.77■□□□□ 0.92
COL1A1-205ENST00000476387 MYD88Q99836 296 aa20.77■□□□□ 0.92
COL1A1-205ENST00000476387 GPRC5DQ9NZD1 345 aa20.77■□□□□ 0.92
COL1A1-205ENST00000476387 CDHR2Q9BYE9 1310 aa20.77■□□□□ 0.91
COL1A1-205ENST00000476387 PCCAP05165 728 aaPredicted RBP20.76■□□□□ 0.91
COL1A1-205ENST00000476387 TNIP1Q15025 636 aa20.76■□□□□ 0.91
COL1A1-205ENST00000476387 METTL22Q9BUU2 404 aaPredicted RBP20.76■□□□□ 0.91
COL1A1-205ENST00000476387 CWC25Q9NXE8 425 aaPredicted RBP20.76■□□□□ 0.91
COL1A1-205ENST00000476387 MKRN1Q9UHC7 482 aaKnown RBP20.76■□□□□ 0.91
COL1A1-205ENST00000476387 CIAPIN1Q6FI81 312 aa20.75■□□□□ 0.91
COL1A1-205ENST00000476387 ADARB2Q9NS39 739 aaKnown RBP20.75■□□□□ 0.91
COL1A1-205ENST00000476387 HSPA1AP0DMV8 641 aaKnown RBP20.74■□□□□ 0.91
COL1A1-205ENST00000476387 HSPA1BP0DMV9 641 aaKnown RBP20.74■□□□□ 0.91
COL1A1-205ENST00000476387 RPS8P62241 208 aaKnown RBP20.74■□□□□ 0.91
COL1A1-205ENST00000476387 PDE8AO60658 829 aa20.73■□□□□ 0.91
COL1A1-205ENST00000476387 GMPSP49915 693 aaPredicted RBP20.73■□□□□ 0.91
COL1A1-205ENST00000476387 EXOSC9Q06265 439 aaKnown RBP20.73■□□□□ 0.91
COL1A1-205ENST00000476387 WASHC4Q2M389 1173 aa20.73■□□□□ 0.91
COL1A1-205ENST00000476387 KSR2Q6VAB6 950 aa20.73■□□□□ 0.91
COL1A1-205ENST00000476387 NSFL1CQ9UNZ2 370 aaKnown RBP20.73■□□□□ 0.91
COL1A1-205ENST00000476387 GPSM2P81274 684 aa20.72■□□□□ 0.91
COL1A1-205ENST00000476387 CCDC152Q4G0S7 254 aa20.72■□□□□ 0.91
COL1A1-205ENST00000476387 SPINK5Q9NQ38 1064 aaPredicted RBP20.72■□□□□ 0.91
COL1A1-205ENST00000476387 MAP3K2Q9Y2U5 619 aa20.72■□□□□ 0.91
COL1A1-205ENST00000476387 COL4A1P02462 1669 aa20.71■□□□□ 0.91
COL1A1-205ENST00000476387 PI4KAP2A4QPH2 592 aa20.71■□□□□ 0.91
COL1A1-205ENST00000476387 YDJCA8MPS7 323 aa20.71■□□□□ 0.91
COL1A1-205ENST00000476387 RAD17O75943 681 aa20.71■□□□□ 0.91
COL1A1-205ENST00000476387 SLC4A2P04920 1241 aa20.71■□□□□ 0.91
COL1A1-205ENST00000476387 PI4KAP1Q8N8J0 262 aa20.71■□□□□ 0.91
COL1A1-205ENST00000476387 EYA3Q99504 573 aa20.71■□□□□ 0.91
COL1A1-205ENST00000476387 POLLQ9UGP5 575 aa20.71■□□□□ 0.91
COL1A1-205ENST00000476387 ZNF521Q96K83 1311 aa20.71■□□□□ 0.91
COL1A1-205ENST00000476387 C6orf229H3BNL8 230 aa20.7■□□□□ 0.9
COL1A1-205ENST00000476387 BCL2L13Q9BXK5 485 aa20.7■□□□□ 0.9
COL1A1-205ENST00000476387 PODXL2Q9NZ53 605 aa20.7■□□□□ 0.9
COL1A1-205ENST00000476387 MYH3P11055 1940 aa20.7■□□□□ 0.9
COL1A1-205ENST00000476387 RASSF10A6NK89 507 aa20.69■□□□□ 0.9
COL1A1-205ENST00000476387 VAMP4O75379 141 aa20.69■□□□□ 0.9
COL1A1-205ENST00000476387 NEXNQ0ZGT2 675 aa20.69■□□□□ 0.9
COL1A1-205ENST00000476387 COL13A1Q5TAT6 717 aaPredicted RBP20.69■□□□□ 0.9
COL1A1-205ENST00000476387 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
COL1A1-205ENST00000476387 SEC31BQ9NQW1 1179 aa20.69■□□□□ 0.9
COL1A1-205ENST00000476387 IGKV5-2P06315 115 aa20.68■□□□□ 0.9
COL1A1-205ENST00000476387 VEGFBP49765 207 aa20.68■□□□□ 0.9
COL1A1-205ENST00000476387 TBC1D16Q8TBP0 767 aa20.68■□□□□ 0.9
COL1A1-205ENST00000476387 ZC3H15Q8WU90 426 aaKnown RBP20.68■□□□□ 0.9
COL1A1-205ENST00000476387 PGAP2Q9UHJ9 254 aa20.68■□□□□ 0.9
COL1A1-205ENST00000476387 FLIIQ13045 1269 aa20.67■□□□□ 0.9
COL1A1-205ENST00000476387 DEFB115Q30KQ5 88 aa20.67■□□□□ 0.9
COL1A1-205ENST00000476387 G2E3Q7L622 706 aa20.67■□□□□ 0.9
COL1A1-205ENST00000476387 DPF2Q92785 391 aa20.67■□□□□ 0.9
COL1A1-205ENST00000476387 FKBP5Q13451 457 aaPredicted RBP20.66■□□□□ 0.9
COL1A1-205ENST00000476387 JARID2Q92833 1246 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms