RNA–Protein interactions for RNA: ENST00000476106.5

SOD1-204, Transcript of superoxide dismutase 1, humanhuman

TSL 5

Gene SOD1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-204ENST00000476106 UBE3BQ7Z3V4 1068 aa17.42■□□□□ 0.38
SOD1-204ENST00000476106 CCDC191Q8NCU4 936 aa17.42■□□□□ 0.38
SOD1-204ENST00000476106 ZNF219Q9P2Y4 722 aaPredicted RBP17.42■□□□□ 0.38
SOD1-204ENST00000476106 RIC1Q4ADV7 1423 aa17.41■□□□□ 0.38
SOD1-204ENST00000476106 LBX1P52954 281 aa17.41■□□□□ 0.38
SOD1-204ENST00000476106 RPGRQ92834 1020 aaKnown RBP17.41■□□□□ 0.38
SOD1-204ENST00000476106 RNF123Q5XPI4 1314 aa17.41■□□□□ 0.38
SOD1-204ENST00000476106 SBF1O95248 1867 aa17.4■□□□□ 0.38
SOD1-204ENST00000476106 FER1L6Q2WGJ9 1857 aa17.4■□□□□ 0.38
SOD1-204ENST00000476106 COL4A1P02462 1669 aa17.4■□□□□ 0.38
SOD1-204ENST00000476106 CCDC85CA6NKD9 419 aa17.4■□□□□ 0.38
SOD1-204ENST00000476106 IRS4O14654 1257 aaPredicted RBP17.4■□□□□ 0.38
SOD1-204ENST00000476106 LINS1Q8NG48 757 aa17.4■□□□□ 0.38
SOD1-204ENST00000476106 TNNQ9UQP3 1299 aa17.4■□□□□ 0.38
SOD1-204ENST00000476106 PCCAP05165 728 aaPredicted RBP17.39■□□□□ 0.37
SOD1-204ENST00000476106 SRGNP10124 158 aa17.39■□□□□ 0.37
SOD1-204ENST00000476106 TRIM28Q13263 835 aaKnown RBP17.39■□□□□ 0.37
SOD1-204ENST00000476106 GCKRQ14397 625 aa17.39■□□□□ 0.37
SOD1-204ENST00000476106 BEND3Q5T5X7 828 aa17.39■□□□□ 0.37
SOD1-204ENST00000476106 ZBTB38Q8NAP3 1195 aaPredicted RBP17.39■□□□□ 0.37
SOD1-204ENST00000476106 NLRP3Q96P20 1036 aa17.39■□□□□ 0.37
SOD1-204ENST00000476106 CCDC85AQ96PX6 553 aaPredicted RBP17.39■□□□□ 0.37
SOD1-204ENST00000476106 SRCIN1Q9C0H9 1055 aa17.39■□□□□ 0.37
SOD1-204ENST00000476106 TTLL6Q8N841 843 aa17.38■□□□□ 0.37
SOD1-204ENST00000476106 CLUAP1Q96AJ1 413 aa17.38■□□□□ 0.37
SOD1-204ENST00000476106 MASTLQ96GX5 879 aa17.38■□□□□ 0.37
SOD1-204ENST00000476106 API5Q9BZZ5 524 aaKnown RBP17.38■□□□□ 0.37
SOD1-204ENST00000476106 CNTNAP1P78357 1384 aa17.38■□□□□ 0.37
SOD1-204ENST00000476106 NPR1P16066 1061 aa17.37■□□□□ 0.37
SOD1-204ENST00000476106 PRPF40BQ6NWY9 871 aaKnown RBP17.37■□□□□ 0.37
SOD1-204ENST00000476106 WBP1LQ9NX94 342 aa17.37■□□□□ 0.37
SOD1-204ENST00000476106 TIAM2Q8IVF5 1701 aa17.37■□□□□ 0.37
SOD1-204ENST00000476106 LRRC37AA6NMS7 1700 aa17.36■□□□□ 0.37
SOD1-204ENST00000476106 LMNB1P20700 586 aa17.36■□□□□ 0.37
SOD1-204ENST00000476106 STYK1Q6J9G0 422 aa17.36■□□□□ 0.37
SOD1-204ENST00000476106 C9orf78Q9NZ63 289 aaPredicted RBP17.36■□□□□ 0.37
SOD1-204ENST00000476106 RCAN3Q9UKA8 241 aa17.36■□□□□ 0.37
SOD1-204ENST00000476106 PDZRN3Q9UPQ7 1066 aa17.36■□□□□ 0.37
SOD1-204ENST00000476106 A0A1B0GUL6 1792 aa17.35■□□□□ 0.37
SOD1-204ENST00000476106 IPO8O15397 1037 aaKnown RBP17.35■□□□□ 0.37
SOD1-204ENST00000476106 TRIM27P14373 513 aa17.35■□□□□ 0.37
SOD1-204ENST00000476106 BRPF1P55201 1214 aaPredicted RBP17.35■□□□□ 0.37
SOD1-204ENST00000476106 CRY2Q49AN0 593 aa17.35■□□□□ 0.37
SOD1-204ENST00000476106 SLC10A5Q5PT55 438 aa17.35■□□□□ 0.37
SOD1-204ENST00000476106 DPY19L2Q6NUT2 758 aa17.35■□□□□ 0.37
SOD1-204ENST00000476106 CNKSR1Q969H4 720 aa17.35■□□□□ 0.37
SOD1-204ENST00000476106 RBM17Q96I25 401 aaKnown RBP17.35■□□□□ 0.37
SOD1-204ENST00000476106 CDHR2Q9BYE9 1310 aa17.35■□□□□ 0.37
SOD1-204ENST00000476106 DICER1Q9UPY3 1922 aaKnown RBP17.35■□□□□ 0.37
SOD1-204ENST00000476106 GRM8O00222 908 aa17.34■□□□□ 0.37
SOD1-204ENST00000476106 ABCC4O15439 1325 aa17.34■□□□□ 0.37
SOD1-204ENST00000476106 C21orf2O43822 256 aa17.34■□□□□ 0.37
SOD1-204ENST00000476106 ALDH1L1O75891 902 aa17.34■□□□□ 0.37
SOD1-204ENST00000476106 ZKSCAN2Q63HK3 967 aa17.34■□□□□ 0.37
SOD1-204ENST00000476106 CHADLQ6NUI6 762 aa17.34■□□□□ 0.37
SOD1-204ENST00000476106 ATF7IPQ6VMQ6 1270 aa17.34■□□□□ 0.37
SOD1-204ENST00000476106 SLC51AQ86UW1 340 aa17.34■□□□□ 0.37
SOD1-204ENST00000476106 KLRG2A4D1S0 409 aaPredicted RBP17.33■□□□□ 0.36
SOD1-204ENST00000476106 PDE8AO60658 829 aa17.33■□□□□ 0.36
SOD1-204ENST00000476106 CTSWP56202 376 aa17.33■□□□□ 0.36
SOD1-204ENST00000476106 OLFM4Q6UX06 510 aa17.33■□□□□ 0.36
SOD1-204ENST00000476106 DDX46Q7L014 1031 aaKnown RBP17.33■□□□□ 0.36
SOD1-204ENST00000476106 FTSJ3Q8IY81 847 aaKnown RBP17.33■□□□□ 0.36
SOD1-204ENST00000476106 CHMP3Q9Y3E7 222 aa17.33■□□□□ 0.36
SOD1-204ENST00000476106 H7C1W4 665 aa17.32■□□□□ 0.36
SOD1-204ENST00000476106 HSPA8P11142 646 aaKnown RBP17.32■□□□□ 0.36
SOD1-204ENST00000476106 VEGFBP49765 207 aa17.32■□□□□ 0.36
SOD1-204ENST00000476106 CCT4P50991 539 aaKnown RBP17.32■□□□□ 0.36
SOD1-204ENST00000476106 POTECB2RU33 542 aa17.31■□□□□ 0.36
SOD1-204ENST00000476106 PPEF1O14829 653 aaPredicted RBP17.31■□□□□ 0.36
SOD1-204ENST00000476106 PLIN1O60240 522 aa17.31■□□□□ 0.36
SOD1-204ENST00000476106 NBPF7P0C2Y1 421 aaPredicted RBP17.31■□□□□ 0.36
SOD1-204ENST00000476106 HSP90B1P14625 803 aaKnown RBP17.31■□□□□ 0.36
SOD1-204ENST00000476106 CASP7P55210 303 aa17.31■□□□□ 0.36
SOD1-204ENST00000476106 RASSF7Q02833 373 aa17.31■□□□□ 0.36
SOD1-204ENST00000476106 ALDH1B1P30837 517 aa17.3■□□□□ 0.36
SOD1-204ENST00000476106 MAP2K1Q02750 393 aaPredicted RBP17.3■□□□□ 0.36
SOD1-204ENST00000476106 CCDC152Q4G0S7 254 aa17.3■□□□□ 0.36
SOD1-204ENST00000476106 ARHGAP45Q92619 1136 aa17.3■□□□□ 0.36
SOD1-204ENST00000476106 SEC31BQ9NQW1 1179 aa17.3■□□□□ 0.36
SOD1-204ENST00000476106 HOXA10P31260 410 aaPredicted RBP17.29■□□□□ 0.36
SOD1-204ENST00000476106 TMEM57Q8N5G2 664 aa17.29■□□□□ 0.36
SOD1-204ENST00000476106 SUCLG2Q96I99 432 aa17.29■□□□□ 0.36
SOD1-204ENST00000476106 CRAMP1Q96RY5 1269 aa17.29■□□□□ 0.36
SOD1-204ENST00000476106 GREM2Q9H772 168 aa17.29■□□□□ 0.36
SOD1-204ENST00000476106 GRAPQ13588 217 aa17.28■□□□□ 0.36
SOD1-204ENST00000476106 SF3B3Q15393 1217 aaKnown RBP17.28■□□□□ 0.36
SOD1-204ENST00000476106 EPHA10Q5JZY3 1008 aa17.28■□□□□ 0.36
SOD1-204ENST00000476106 ITPRIPQ8IWB1 547 aa17.28■□□□□ 0.36
SOD1-204ENST00000476106 DZIP1LQ8IYY4 767 aaKnown RBP17.28■□□□□ 0.36
SOD1-204ENST00000476106 GRAPLQ8TC17 118 aaPredicted RBP17.28■□□□□ 0.36
SOD1-204ENST00000476106 PANK1Q8TE04 598 aa17.28■□□□□ 0.36
SOD1-204ENST00000476106 CELF1Q92879 486 aaKnown RBP17.28■□□□□ 0.36
SOD1-204ENST00000476106 UBTFL1P0CB47 393 aaPredicted RBP17.27■□□□□ 0.36
SOD1-204ENST00000476106 RLBP1P12271 317 aa17.27■□□□□ 0.36
SOD1-204ENST00000476106 TTLL11Q8NHH1 800 aa17.27■□□□□ 0.36
SOD1-204ENST00000476106 MEIS3Q99687 375 aa17.27■□□□□ 0.36
SOD1-204ENST00000476106 USP44Q9H0E7 712 aa17.27■□□□□ 0.36
SOD1-204ENST00000476106 LTBP1Q14766 1721 aa17.27■□□□□ 0.35
SOD1-204ENST00000476106 TMEM88BA6NKF7 163 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms