RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-208ENST00000474839 TPM3P06753 285 aa14.25□□□□□ -0.13
SKIV2L-208ENST00000474839 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
SKIV2L-208ENST00000474839 NECTIN1Q15223 517 aa14.25□□□□□ -0.13
SKIV2L-208ENST00000474839 NBPF6Q5VWK0 638 aa14.25□□□□□ -0.13
SKIV2L-208ENST00000474839 NBPF4Q96M43 638 aa14.25□□□□□ -0.13
SKIV2L-208ENST00000474839 ZNF75DP51815 510 aa14.24□□□□□ -0.13
SKIV2L-208ENST00000474839 SLC39A6Q13433 755 aa14.24□□□□□ -0.13
SKIV2L-208ENST00000474839 CCDC144BQ3MJ40 725 aa14.24□□□□□ -0.13
SKIV2L-208ENST00000474839 CCDC144CPQ8IYA2 1237 aa14.24□□□□□ -0.13
SKIV2L-208ENST00000474839 SUCLG2Q96I99 432 aa14.24□□□□□ -0.13
SKIV2L-208ENST00000474839 NEUROD6Q96NK8 337 aa14.24□□□□□ -0.13
SKIV2L-208ENST00000474839 IGSF1Q8N6C5 1336 aa14.24□□□□□ -0.13
SKIV2L-208ENST00000474839 ME1P48163 572 aa14.24□□□□□ -0.13
SKIV2L-208ENST00000474839 HOMEZQ8IX15 550 aa14.24□□□□□ -0.13
SKIV2L-208ENST00000474839 TBX22Q9Y458 520 aa14.24□□□□□ -0.13
SKIV2L-208ENST00000474839 ANKRD26Q9UPS8 1709 aa14.24□□□□□ -0.13
SKIV2L-208ENST00000474839 AOX1Q06278 1338 aa14.24□□□□□ -0.13
SKIV2L-208ENST00000474839 BIN1O00499 593 aa14.23□□□□□ -0.13
SKIV2L-208ENST00000474839 C1orf141Q5JVX7 400 aa14.23□□□□□ -0.13
SKIV2L-208ENST00000474839 Q6ZUG5 572 aa14.23□□□□□ -0.13
SKIV2L-208ENST00000474839 DDX46Q7L014 1031 aaKnown RBP14.23□□□□□ -0.13
SKIV2L-208ENST00000474839 ERICH4A6NGS2 130 aa14.23□□□□□ -0.13
SKIV2L-208ENST00000474839 USP27XA6NNY8 438 aa14.23□□□□□ -0.13
SKIV2L-208ENST00000474839 SDF4Q9BRK5 362 aa14.23□□□□□ -0.13
SKIV2L-208ENST00000474839 CGNQ9P2M7 1197 aaKnown RBP14.23□□□□□ -0.13
SKIV2L-208ENST00000474839 SBNO1A3KN83 1393 aa14.23□□□□□ -0.13
SKIV2L-208ENST00000474839 CEP135Q66GS9 1140 aa14.23□□□□□ -0.13
SKIV2L-208ENST00000474839 USP6P35125 1406 aa14.23□□□□□ -0.13
SKIV2L-208ENST00000474839 ARHGEF10O15013 1369 aa14.23□□□□□ -0.13
SKIV2L-208ENST00000474839 SETD1BQ9UPS6 1966 aaKnown RBP14.23□□□□□ -0.13
SKIV2L-208ENST00000474839 PGBD1Q96JS3 809 aa14.22□□□□□ -0.13
SKIV2L-208ENST00000474839 NCOA5Q9HCD5 579 aaKnown RBP14.22□□□□□ -0.13
SKIV2L-208ENST00000474839 TTC41PQ6P2S7 1318 aa14.22□□□□□ -0.13
SKIV2L-208ENST00000474839 SASH1O94885 1247 aa14.22□□□□□ -0.13
SKIV2L-208ENST00000474839 SKILP12757 684 aa14.22□□□□□ -0.13
SKIV2L-208ENST00000474839 NCBP1Q09161 790 aaKnown RBP14.22□□□□□ -0.13
SKIV2L-208ENST00000474839 CCAR1Q8IX12 1150 aaKnown RBP14.22□□□□□ -0.13
SKIV2L-208ENST00000474839 DBF4Q9UBU7 674 aaPredicted RBP14.22□□□□□ -0.13
SKIV2L-208ENST00000474839 PLEKHG1Q9ULL1 1385 aa14.22□□□□□ -0.13
SKIV2L-208ENST00000474839 RPS6KB1P23443 525 aa14.21□□□□□ -0.13
SKIV2L-208ENST00000474839 SF3A1Q15459 793 aaKnown RBP14.21□□□□□ -0.13
SKIV2L-208ENST00000474839 C11orf57Q6ZUT1 292 aaPredicted RBP14.21□□□□□ -0.13
SKIV2L-208ENST00000474839 SMC2O95347 1197 aa14.21□□□□□ -0.13
SKIV2L-208ENST00000474839 PTPN14Q15678 1187 aa14.21□□□□□ -0.13
SKIV2L-208ENST00000474839 OTUD7BQ6GQQ9 843 aa14.21□□□□□ -0.13
SKIV2L-208ENST00000474839 CCDC73Q6ZRK6 1079 aa14.21□□□□□ -0.13
SKIV2L-208ENST00000474839 MAP4K1Q92918 833 aa14.21□□□□□ -0.13
SKIV2L-208ENST00000474839 NEK1Q96PY6 1258 aa14.21□□□□□ -0.13
SKIV2L-208ENST00000474839 DDX19AQ9NUU7 478 aaKnown RBP14.21□□□□□ -0.13
SKIV2L-208ENST00000474839 CEP170BQ9Y4F5 1589 aaPredicted RBP14.21□□□□□ -0.14
SKIV2L-208ENST00000474839 ATP5J2-PTCD1G3V325 749 aa14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 PTCD1O75127 700 aaKnown RBP14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 STK11IPQ8N1F8 1099 aa14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 NPHP3Q7Z494 1330 aa14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 KINO60870 393 aaKnown RBP14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 GTF2F1P35269 517 aaKnown RBP eCLIP14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 TOB2Q14106 344 aaPredicted RBP14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 ANKRD1Q15327 319 aa14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 PTPN21Q16825 1174 aa14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 ERC1Q8IUD2 1116 aa14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 FAM177A1Q8N128 213 aaPredicted RBP14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 TRERF1Q96PN7 1200 aa14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 CLSTN2Q9H4D0 955 aa14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 HTATSF1O43719 755 aaKnown RBP14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 PSME1Q06323 249 aa14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 APOBRQ0VD83 1088 aa14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 MYD88Q99836 296 aa14.2□□□□□ -0.14
SKIV2L-208ENST00000474839 GRM8O00222 908 aa14.19□□□□□ -0.14
SKIV2L-208ENST00000474839 POLR3DP05423 398 aaPredicted RBP14.19□□□□□ -0.14
SKIV2L-208ENST00000474839 AOPEPQ8N6M6 819 aa14.19□□□□□ -0.14
SKIV2L-208ENST00000474839 TMX1Q9H3N1 280 aa14.19□□□□□ -0.14
SKIV2L-208ENST00000474839 ZNF215Q9UL58 517 aaPredicted RBP14.19□□□□□ -0.14
SKIV2L-208ENST00000474839 ZNF330Q9Y3S2 320 aaPredicted RBP14.19□□□□□ -0.14
SKIV2L-208ENST00000474839 CCDC69A6NI79 296 aa14.18□□□□□ -0.14
SKIV2L-208ENST00000474839 KSR2Q6VAB6 950 aa14.18□□□□□ -0.14
SKIV2L-208ENST00000474839 HOMER1Q86YM7 354 aa14.18□□□□□ -0.14
SKIV2L-208ENST00000474839 TM6SF1Q9BZW5 370 aa14.18□□□□□ -0.14
SKIV2L-208ENST00000474839 SMTNL1A8MU46 457 aa14.18□□□□□ -0.14
SKIV2L-208ENST00000474839 NEXNQ0ZGT2 675 aa14.18□□□□□ -0.14
SKIV2L-208ENST00000474839 FSIP1Q8NA03 581 aa14.18□□□□□ -0.14
SKIV2L-208ENST00000474839 UBR1Q8IWV7 1749 aa14.18□□□□□ -0.14
SKIV2L-208ENST00000474839 DLC1Q96QB1 1528 aa14.18□□□□□ -0.14
SKIV2L-208ENST00000474839 A0A1B0GVL5 298 aa14.17□□□□□ -0.14
SKIV2L-208ENST00000474839 HSP90AA4PQ58FG1 418 aa14.17□□□□□ -0.14
SKIV2L-208ENST00000474839 OVOS2A0A0J9YW53 1432 aa14.17□□□□□ -0.14
SKIV2L-208ENST00000474839 OVOS2Q6IE36 1432 aa14.17□□□□□ -0.14
SKIV2L-208ENST00000474839 ELF2Q15723 593 aa14.17□□□□□ -0.14
SKIV2L-208ENST00000474839 HIP1O00291 1037 aa14.17□□□□□ -0.14
SKIV2L-208ENST00000474839 TFCP2Q12800 502 aa14.17□□□□□ -0.14
SKIV2L-208ENST00000474839 CFAP45Q9UL16 551 aa14.17□□□□□ -0.14
SKIV2L-208ENST00000474839 TTC21AQ8NDW8 1320 aa14.17□□□□□ -0.14
SKIV2L-208ENST00000474839 DDX58O95786 925 aaKnown RBP14.16□□□□□ -0.14
SKIV2L-208ENST00000474839 HAND2P61296 217 aa14.16□□□□□ -0.14
SKIV2L-208ENST00000474839 UBE3BQ7Z3V4 1068 aa14.16□□□□□ -0.14
SKIV2L-208ENST00000474839 SECISBP2LQ93073 1101 aaKnown RBP14.16□□□□□ -0.14
SKIV2L-208ENST00000474839 CCDC85AQ96PX6 553 aaPredicted RBP14.16□□□□□ -0.14
SKIV2L-208ENST00000474839 VGLL3A8MV65 326 aa14.16□□□□□ -0.14
SKIV2L-208ENST00000474839 PLEKHO1Q53GL0 409 aaPredicted RBP14.16□□□□□ -0.14
SKIV2L-208ENST00000474839 LRRC8AQ8IWT6 810 aa14.16□□□□□ -0.14
SKIV2L-208ENST00000474839 GTPBP4Q9BZE4 634 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms