RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 PPP1R2P41236 205 aa5.38□□□□□ -1.55
CCNL1-215ENST00000474539 ZRSR2Q15696 482 aaKnown RBP5.38□□□□□ -1.55
CCNL1-215ENST00000474539 VPS36Q86VN1 386 aa5.38□□□□□ -1.55
CCNL1-215ENST00000474539 CEP57L1Q8IYX8 460 aa5.38□□□□□ -1.55
CCNL1-215ENST00000474539 VSIG10Q8N0Z9 540 aa5.38□□□□□ -1.55
CCNL1-215ENST00000474539 EMILIN1Q9Y6C2 1016 aa5.38□□□□□ -1.55
CCNL1-215ENST00000474539 TTC41PQ6P2S7 1318 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 CCDC194A0A1B0GVG4 234 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 ZEB2O60315 1214 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 HAUS2Q9NVX0 235 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 MAP3K2Q9Y2U5 619 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 TET3O43151 1660 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 ZC3H13Q5T200 1668 aaKnown RBP5.37□□□□□ -1.55
CCNL1-215ENST00000474539 RIMBP3CA6NJZ7 1639 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 RIMBP3BA6NNM3 1639 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 RIMBP3Q9UFD9 1639 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 PTPRTO14522 1441 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 WDR17Q8IZU2 1322 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 MATR3P43243 847 aaKnown RBP eCLIP5.37□□□□□ -1.55
CCNL1-215ENST00000474539 CREBRFQ8IUR6 639 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 DDX12PQ92771 950 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 GPHNQ9NQX3 736 aaPredicted RBP5.37□□□□□ -1.55
CCNL1-215ENST00000474539 SLC12A7Q9Y666 1083 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 DIP2AQ14689 1571 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 DCCP43146 1447 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 GRM8O00222 908 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 IRS4O14654 1257 aaPredicted RBP5.37□□□□□ -1.55
CCNL1-215ENST00000474539 ZBTB24O43167 697 aaPredicted RBP5.37□□□□□ -1.55
CCNL1-215ENST00000474539 BBOX1O75936 387 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 HOXD10P28358 340 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 SNX16P57768 344 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 SLFN5Q08AF3 891 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 FAM98CQ17RN3 349 aaKnown RBP5.37□□□□□ -1.55
CCNL1-215ENST00000474539 CCDC93Q567U6 631 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 MFSD6Q6ZSS7 791 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 NOL8Q76FK4 1167 aaKnown RBP5.37□□□□□ -1.55
CCNL1-215ENST00000474539 CCDC117Q8IWD4 279 aaPredicted RBP5.37□□□□□ -1.55
CCNL1-215ENST00000474539 EXOC8Q8IYI6 725 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 ERCC4Q92889 916 aaPredicted RBP5.37□□□□□ -1.55
CCNL1-215ENST00000474539 CALML4Q96GE6 196 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 IPO9Q96P70 1041 aaKnown RBP5.37□□□□□ -1.55
CCNL1-215ENST00000474539 ZBTB3Q9H5J0 574 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 SLC52A2Q9HAB3 445 aa5.37□□□□□ -1.55
CCNL1-215ENST00000474539 RBM28Q9NW13 759 aaKnown RBP5.37□□□□□ -1.55
CCNL1-215ENST00000474539 BIN2Q9UBW5 565 aaPredicted RBP5.37□□□□□ -1.55
CCNL1-215ENST00000474539 VPS37CA5D8V6 355 aaPredicted RBP5.36□□□□□ -1.55
CCNL1-215ENST00000474539 TSPY2A6NKD2 308 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 ZBED4O75132 1171 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 PCP11498 1178 aaKnown RBP5.36□□□□□ -1.55
CCNL1-215ENST00000474539 MX1P20591 662 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 MAP3K9P80192 1104 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 FAM114A1Q8IWE2 563 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 SULF1Q8IWU6 871 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 MPNDQ8N594 471 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 MSANTD4Q8NCY6 345 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 NCOA7Q8NI08 942 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 ABCD1P33897 745 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 SLC4A3P48751 1232 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 SSRP1Q08945 709 aaKnown RBP5.36□□□□□ -1.55
CCNL1-215ENST00000474539 ACSBG1Q96GR2 724 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 SDF4Q9BRK5 362 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 TCP11L1Q9NUJ3 509 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 CIZ1Q9ULV3 898 aaPredicted RBP5.36□□□□□ -1.55
CCNL1-215ENST00000474539 CDC42BPGQ6DT37 1551 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 KRT85P78386 507 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 EIF4A2Q14240 407 aaKnown RBP5.36□□□□□ -1.55
CCNL1-215ENST00000474539 SPON1Q9HCB6 807 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 C6orf50Q9HD87 102 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 LEMD3Q9Y2U8 911 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 ABCC3O15438 1527 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 ADGRB3O60242 1522 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 KDM2BQ8NHM5 1336 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 ARHGEF37A1IGU5 675 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 ANKRD62A6NC57 917 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 SMTNL1A8MU46 457 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 IL6STP40189 918 aaPredicted RBP5.36□□□□□ -1.55
CCNL1-215ENST00000474539 DLGAP5Q15398 846 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 IQCEQ6IPM2 695 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 CHD1LQ86WJ1 897 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 CDAN1Q8IWY9 1227 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 GTF3C2Q8WUA4 911 aaPredicted RBP5.36□□□□□ -1.55
CCNL1-215ENST00000474539 GOPCQ9HD26 462 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 ARHGEF40Q8TER5 1519 aa5.36□□□□□ -1.55
CCNL1-215ENST00000474539 MAP3K4Q9Y6R4 1608 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 M0QZ92 97 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 TSPY3P0CV98 308 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 TSPY8P0CW00 308 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 GNA11P29992 359 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 USP14P54578 494 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 PUM3Q15397 648 aaKnown RBP5.35□□□□□ -1.55
CCNL1-215ENST00000474539 LNPKQ9C0E8 428 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 SIL1Q9H173 461 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 PNMA3Q9UL41 463 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 RABGAP1Q9Y3P9 1069 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 ZMYM4Q5VZL5 1548 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 LMTK2Q8IWU2 1503 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 GOLGA6L3A6NEY3 463 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 EPB41L2O43491 1005 aaKnown RBP5.35□□□□□ -1.55
CCNL1-215ENST00000474539 OSBPP22059 807 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 FBXO41Q8TF61 875 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms