RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 PRR23CQ6ZRP0 262 aa9.19□□□□□ -0.94
SSB-210ENST00000474273 DEAF1O75398 565 aaPredicted RBP9.18□□□□□ -0.94
SSB-210ENST00000474273 ARSDP51689 593 aa9.18□□□□□ -0.94
SSB-210ENST00000474273 FLIIQ13045 1269 aa9.18□□□□□ -0.94
SSB-210ENST00000474273 KRT25Q7Z3Z0 450 aa9.18□□□□□ -0.94
SSB-210ENST00000474273 KRTAP19-1Q8IUB9 90 aa9.18□□□□□ -0.94
SSB-210ENST00000474273 IFT43Q96FT9 208 aa9.18□□□□□ -0.94
SSB-210ENST00000474273 HINFPQ9BQA5 517 aa9.18□□□□□ -0.94
SSB-210ENST00000474273 TARSP26639 723 aaKnown RBP9.17□□□□□ -0.94
SSB-210ENST00000474273 MLLT1Q03111 559 aaPredicted RBP9.17□□□□□ -0.94
SSB-210ENST00000474273 SLC51AQ86UW1 340 aa9.17□□□□□ -0.94
SSB-210ENST00000474273 KLK14Q9P0G3 267 aa9.17□□□□□ -0.94
SSB-210ENST00000474273 MAFBQ9Y5Q3 323 aaPredicted RBP9.17□□□□□ -0.94
SSB-210ENST00000474273 DLL1O00548 723 aa9.16□□□□□ -0.94
SSB-210ENST00000474273 RARAP10276 462 aa9.16□□□□□ -0.94
SSB-210ENST00000474273 MCTP1Q6DN14 999 aa9.16□□□□□ -0.94
SSB-210ENST00000474273 DZIP1LQ8IYY4 767 aaKnown RBP9.16□□□□□ -0.94
SSB-210ENST00000474273 SMG9Q9H0W8 520 aaKnown RBP9.16□□□□□ -0.94
SSB-210ENST00000474273 GOLGA2P5Q9HBQ8 144 aa9.16□□□□□ -0.94
SSB-210ENST00000474273 ARID4AP29374 1257 aaPredicted RBP9.15□□□□□ -0.94
SSB-210ENST00000474273 NRLP54845 237 aa9.15□□□□□ -0.94
SSB-210ENST00000474273 DGKZQ13574 1117 aa9.15□□□□□ -0.94
SSB-210ENST00000474273 LARP1Q6PKG0 1096 aaKnown RBP9.15□□□□□ -0.94
SSB-210ENST00000474273 TFIP11Q9UBB9 837 aaKnown RBP9.15□□□□□ -0.94
SSB-210ENST00000474273 SASH3O75995 380 aa9.14□□□□□ -0.95
SSB-210ENST00000474273 PTK7Q13308 1070 aa9.14□□□□□ -0.95
SSB-210ENST00000474273 AKTIPQ9H8T0 292 aa9.14□□□□□ -0.95
SSB-210ENST00000474273 BTBD11A6QL63 1104 aa9.13□□□□□ -0.95
SSB-210ENST00000474273 LGR5O75473 907 aa9.13□□□□□ -0.95
SSB-210ENST00000474273 MICAL2O94851 1124 aa9.13□□□□□ -0.95
SSB-210ENST00000474273 DPYDQ12882 1025 aa9.13□□□□□ -0.95
SSB-210ENST00000474273 CRTC2Q53ET0 693 aaPredicted RBP9.13□□□□□ -0.95
SSB-210ENST00000474273 QTRT2Q9H974 415 aaKnown RBP9.13□□□□□ -0.95
SSB-210ENST00000474273 PCMTD2Q9NV79 361 aa9.13□□□□□ -0.95
SSB-210ENST00000474273 EIF2AK2P19525 551 aaKnown RBP9.12□□□□□ -0.95
SSB-210ENST00000474273 FSTP19883 344 aa9.12□□□□□ -0.95
SSB-210ENST00000474273 HFE2Q6ZVN8 426 aa9.12□□□□□ -0.95
SSB-210ENST00000474273 TMEM130Q8N3G9 435 aa9.12□□□□□ -0.95
SSB-210ENST00000474273 KRTAP9-9Q9BYP9 154 aa9.12□□□□□ -0.95
SSB-210ENST00000474273 KRTAP9-4Q9BYQ2 154 aa9.12□□□□□ -0.95
SSB-210ENST00000474273 MRPL18Q9H0U6 180 aaKnown RBP9.12□□□□□ -0.95
SSB-210ENST00000474273 TLR7Q9NYK1 1049 aaKnown RBP9.12□□□□□ -0.95
SSB-210ENST00000474273 C11orf91Q3C1V1 193 aa9.11□□□□□ -0.95
SSB-210ENST00000474273 GLMNQ92990 594 aa9.11□□□□□ -0.95
SSB-210ENST00000474273 MYO19Q96H55 970 aa9.11□□□□□ -0.95
SSB-210ENST00000474273 F8W735 103 aaPredicted RBP9.1□□□□□ -0.95
SSB-210ENST00000474273 EGFRP00533 1210 aa9.1□□□□□ -0.95
SSB-210ENST00000474273 ANKMY2Q8IV38 441 aa9.1□□□□□ -0.95
SSB-210ENST00000474273 PLD4Q96BZ4 506 aa9.1□□□□□ -0.95
SSB-210ENST00000474273 SRA1Q9HD15 236 aaKnown RBP9.1□□□□□ -0.95
SSB-210ENST00000474273 COL17A1Q9UMD9 1497 aaPredicted RBP9.09□□□□□ -0.95
SSB-210ENST00000474273 FAM196BA6NMK8 535 aa9.09□□□□□ -0.95
SSB-210ENST00000474273 USP17L15C9J2P7 530 aa9.09□□□□□ -0.95
SSB-210ENST00000474273 USP17L10C9JJH3 530 aa9.09□□□□□ -0.95
SSB-210ENST00000474273 USP17L13C9JLJ4 530 aa9.09□□□□□ -0.95
SSB-210ENST00000474273 USP17L12C9JPN9 530 aa9.09□□□□□ -0.95
SSB-210ENST00000474273 USP17L11C9JVI0 530 aa9.09□□□□□ -0.95
SSB-210ENST00000474273 USP17L21D6R901 530 aa9.09□□□□□ -0.95
SSB-210ENST00000474273 USP17L18D6R9N7 530 aa9.09□□□□□ -0.95
SSB-210ENST00000474273 USP17L22D6RA61 530 aa9.09□□□□□ -0.95
SSB-210ENST00000474273 USP17L17D6RBQ6 530 aa9.09□□□□□ -0.95
SSB-210ENST00000474273 USP17L19D6RCP7 530 aa9.09□□□□□ -0.95
SSB-210ENST00000474273 USP17L20D6RJB6 530 aa9.09□□□□□ -0.95
SSB-210ENST00000474273 OPLAHO14841 1288 aa9.09□□□□□ -0.95
SSB-210ENST00000474273 FOXO3O43524 673 aa9.09□□□□□ -0.95
SSB-210ENST00000474273 ALX3O95076 343 aa9.09□□□□□ -0.95
SSB-210ENST00000474273 USP17L24Q0WX57 530 aa9.09□□□□□ -0.95
SSB-210ENST00000474273 KANK4Q5T7N3 995 aaPredicted RBP9.09□□□□□ -0.95
SSB-210ENST00000474273 RTCBQ9Y3I0 505 aaKnown RBP9.09□□□□□ -0.95
SSB-210ENST00000474273 LOC102724428A0A0B4J2F2 783 aa9.08□□□□□ -0.96
SSB-210ENST00000474273 WEE1P30291 646 aa9.08□□□□□ -0.96
SSB-210ENST00000474273 CD97P48960 835 aa9.08□□□□□ -0.96
SSB-210ENST00000474273 SIK1P57059 783 aa9.08□□□□□ -0.96
SSB-210ENST00000474273 Q6ZS46 218 aa9.08□□□□□ -0.96
SSB-210ENST00000474273 DCAF11Q8TEB1 546 aa9.08□□□□□ -0.96
SSB-210ENST00000474273 SSTR4P31391 388 aa9.07□□□□□ -0.96
SSB-210ENST00000474273 MAP4K3Q8IVH8 894 aa9.07□□□□□ -0.96
SSB-210ENST00000474273 IL22RA1Q8N6P7 574 aa9.07□□□□□ -0.96
SSB-210ENST00000474273 VTI1AQ96AJ9 217 aa9.07□□□□□ -0.96
SSB-210ENST00000474273 J3QW42 95 aa9.06□□□□□ -0.96
SSB-210ENST00000474273 XYLBO75191 536 aa9.06□□□□□ -0.96
SSB-210ENST00000474273 PSAPP07602 524 aa9.06□□□□□ -0.96
SSB-210ENST00000474273 HOXD8P13378 290 aaPredicted RBP9.06□□□□□ -0.96
SSB-210ENST00000474273 GDF6Q6KF10 455 aaPredicted RBP9.06□□□□□ -0.96
SSB-210ENST00000474273 PPP1R12CQ9BZL4 782 aa9.06□□□□□ -0.96
SSB-210ENST00000474273 USP20Q9Y2K6 914 aa9.06□□□□□ -0.96
SSB-210ENST00000474273 PAX4O43316 350 aa9.05□□□□□ -0.96
SSB-210ENST00000474273 GHRHP01286 108 aa9.05□□□□□ -0.96
SSB-210ENST00000474273 SOX18P35713 384 aa9.05□□□□□ -0.96
SSB-210ENST00000474273 SETDB1Q15047 1291 aa9.05□□□□□ -0.96
SSB-210ENST00000474273 FNBP4Q8N3X1 1017 aaPredicted RBP9.05□□□□□ -0.96
SSB-210ENST00000474273 GSC2O15499 205 aa9.04□□□□□ -0.96
SSB-210ENST00000474273 MMP20O60882 483 aa9.04□□□□□ -0.96
SSB-210ENST00000474273 ARXQ96QS3 562 aa9.04□□□□□ -0.96
SSB-210ENST00000474273 RBSNQ9H1K0 784 aa9.04□□□□□ -0.96
SSB-210ENST00000474273 LRFN2Q9ULH4 789 aa9.04□□□□□ -0.96
SSB-210ENST00000474273 PTCD1O75127 700 aaKnown RBP9.03□□□□□ -0.96
SSB-210ENST00000474273 RGL4Q8IZJ4 473 aa9.03□□□□□ -0.96
SSB-210ENST00000474273 CMTR1Q8N1G2 835 aaKnown RBP9.03□□□□□ -0.96
SSB-210ENST00000474273 CACTIN-AS1Q8N1I8 211 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms