RNA–Protein interactions for RNA: ENST00000474270.1

ABCD4-207, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-207ENST00000474270 ITGBL1O95965 494 aaPredicted RBP16.58■□□□□ 0.24
ABCD4-207ENST00000474270 HOXA10P31260 410 aaPredicted RBP16.58■□□□□ 0.24
ABCD4-207ENST00000474270 ALDH1L2Q3SY69 923 aa16.58■□□□□ 0.24
ABCD4-207ENST00000474270 PARP10Q53GL7 1025 aa16.58■□□□□ 0.24
ABCD4-207ENST00000474270 MAP1SQ66K74 1059 aaPredicted RBP16.58■□□□□ 0.24
ABCD4-207ENST00000474270 UTP14AQ9BVJ6 771 aaKnown RBP16.58■□□□□ 0.24
ABCD4-207ENST00000474270 MYH3P11055 1940 aa16.57■□□□□ 0.24
ABCD4-207ENST00000474270 PPEF1O14829 653 aaPredicted RBP16.57■□□□□ 0.24
ABCD4-207ENST00000474270 FOXN1O15353 648 aa16.57■□□□□ 0.24
ABCD4-207ENST00000474270 VEGFBP49765 207 aa16.57■□□□□ 0.24
ABCD4-207ENST00000474270 EIF6P56537 245 aaKnown RBP16.57■□□□□ 0.24
ABCD4-207ENST00000474270 CFAP44Q96MT7 982 aa16.57■□□□□ 0.24
ABCD4-207ENST00000474270 NLRP3Q96P20 1036 aa16.57■□□□□ 0.24
ABCD4-207ENST00000474270 PSMD1Q99460 953 aa16.57■□□□□ 0.24
ABCD4-207ENST00000474270 DDX21Q9NR30 783 aaKnown RBP eCLIP16.57■□□□□ 0.24
ABCD4-207ENST00000474270 CHPF2Q9P2E5 772 aa16.57■□□□□ 0.24
ABCD4-207ENST00000474270 KIF16BQ96L93 1317 aa16.56■□□□□ 0.24
ABCD4-207ENST00000474270 IPO8O15397 1037 aaKnown RBP16.56■□□□□ 0.24
ABCD4-207ENST00000474270 BRPF1P55201 1214 aaPredicted RBP16.56■□□□□ 0.24
ABCD4-207ENST00000474270 CC2D2BQ6DHV5 1058 aa16.56■□□□□ 0.24
ABCD4-207ENST00000474270 PNMA8AQ86V59 439 aaPredicted RBP16.56■□□□□ 0.24
ABCD4-207ENST00000474270 CNTROBQ8N137 903 aa16.56■□□□□ 0.24
ABCD4-207ENST00000474270 GPC2Q8N158 579 aa16.56■□□□□ 0.24
ABCD4-207ENST00000474270 CRAMP1Q96RY5 1269 aa16.56■□□□□ 0.24
ABCD4-207ENST00000474270 POLR2AP24928 1970 aaKnown RBP16.56■□□□□ 0.24
ABCD4-207ENST00000474270 HCLS1P14317 486 aaPredicted RBP16.55■□□□□ 0.24
ABCD4-207ENST00000474270 HDGFL1Q5TGJ6 251 aa16.55■□□□□ 0.24
ABCD4-207ENST00000474270 NLRP10Q86W26 655 aa16.55■□□□□ 0.24
ABCD4-207ENST00000474270 LARGE2Q8N3Y3 721 aa16.55■□□□□ 0.24
ABCD4-207ENST00000474270 AIDAQ96BJ3 306 aa16.55■□□□□ 0.24
ABCD4-207ENST00000474270 COL4A1P02462 1669 aa16.55■□□□□ 0.24
ABCD4-207ENST00000474270 ABCC4O15439 1325 aa16.54■□□□□ 0.24
ABCD4-207ENST00000474270 ZNF853P0CG23 659 aa16.54■□□□□ 0.24
ABCD4-207ENST00000474270 LMOD1P29536 600 aaPredicted RBP16.54■□□□□ 0.24
ABCD4-207ENST00000474270 HSP90AB3PQ58FF7 597 aa16.54■□□□□ 0.24
ABCD4-207ENST00000474270 B4GALNT3Q6L9W6 998 aa16.54■□□□□ 0.24
ABCD4-207ENST00000474270 EXOC6Q8TAG9 804 aa16.54■□□□□ 0.24
ABCD4-207ENST00000474270 CHMP4BQ9H444 224 aaKnown RBP16.54■□□□□ 0.24
ABCD4-207ENST00000474270 TCIRG1Q13488 830 aa16.53■□□□□ 0.24
ABCD4-207ENST00000474270 SLC10A5Q5PT55 438 aa16.53■□□□□ 0.24
ABCD4-207ENST00000474270 TRMT112Q9UI30 125 aaKnown RBP16.53■□□□□ 0.24
ABCD4-207ENST00000474270 ABT1Q9ULW3 272 aaKnown RBP16.53■□□□□ 0.24
ABCD4-207ENST00000474270 DEFB115Q30KQ5 88 aa16.52■□□□□ 0.24
ABCD4-207ENST00000474270 NIM1KQ8IY84 436 aa16.52■□□□□ 0.24
ABCD4-207ENST00000474270 CRBNQ96SW2 442 aa16.52■□□□□ 0.24
ABCD4-207ENST00000474270 CHMP4AQ9BY43 222 aa16.52■□□□□ 0.24
ABCD4-207ENST00000474270 MBIPQ9NS73 344 aa16.52■□□□□ 0.24
ABCD4-207ENST00000474270 DUOX1Q9NRD9 1551 aa16.51■□□□□ 0.23
ABCD4-207ENST00000474270 CACNA1FO60840 1977 aa16.51■□□□□ 0.23
ABCD4-207ENST00000474270 PPIP5K2O43314 1243 aa16.51■□□□□ 0.23
ABCD4-207ENST00000474270 EPS15P42566 896 aa16.51■□□□□ 0.23
ABCD4-207ENST00000474270 CTCFP49711 727 aaPredicted RBP16.51■□□□□ 0.23
ABCD4-207ENST00000474270 AOC3Q16853 763 aa16.51■□□□□ 0.23
ABCD4-207ENST00000474270 ZKSCAN2Q63HK3 967 aa16.51■□□□□ 0.23
ABCD4-207ENST00000474270 TMX4Q9H1E5 349 aaPredicted RBP16.51■□□□□ 0.23
ABCD4-207ENST00000474270 ATP6V0A2Q9Y487 856 aa16.51■□□□□ 0.23
ABCD4-207ENST00000474270 SH3TC1Q8TE82 1336 aa16.5■□□□□ 0.23
ABCD4-207ENST00000474270 ATP5J2-PTCD1G3V325 749 aa16.5■□□□□ 0.23
ABCD4-207ENST00000474270 PLIN1O60240 522 aa16.5■□□□□ 0.23
ABCD4-207ENST00000474270 SCNN1DP51172 638 aa16.5■□□□□ 0.23
ABCD4-207ENST00000474270 EXOSC9Q06265 439 aaKnown RBP16.5■□□□□ 0.23
ABCD4-207ENST00000474270 FMR1Q06787 632 aaKnown RBP eCLIP16.5■□□□□ 0.23
ABCD4-207ENST00000474270 GRIPAP1Q4V328 841 aa16.5■□□□□ 0.23
ABCD4-207ENST00000474270 PLBD2Q8NHP8 589 aa16.5■□□□□ 0.23
ABCD4-207ENST00000474270 ARHGAP45Q92619 1136 aa16.5■□□□□ 0.23
ABCD4-207ENST00000474270 PRDM10Q9NQV6 1147 aa16.5■□□□□ 0.23
ABCD4-207ENST00000474270 DBF4Q9UBU7 674 aaPredicted RBP16.5■□□□□ 0.23
ABCD4-207ENST00000474270 RASSF10A6NK89 507 aa16.49■□□□□ 0.23
ABCD4-207ENST00000474270 ELL2O00472 640 aaPredicted RBP16.49■□□□□ 0.23
ABCD4-207ENST00000474270 BCAR3O75815 825 aa16.49■□□□□ 0.23
ABCD4-207ENST00000474270 HOXB7P09629 217 aa16.49■□□□□ 0.23
ABCD4-207ENST00000474270 LBX1P52954 281 aa16.49■□□□□ 0.23
ABCD4-207ENST00000474270 RTL5Q5HYW3 569 aaPredicted RBP16.49■□□□□ 0.23
ABCD4-207ENST00000474270 ANKRD13DQ6ZTN6 518 aa16.49■□□□□ 0.23
ABCD4-207ENST00000474270 PAXIP1Q6ZW49 1069 aaPredicted RBP16.49■□□□□ 0.23
ABCD4-207ENST00000474270 CENPQQ7L2Z9 268 aaPredicted RBP16.49■□□□□ 0.23
ABCD4-207ENST00000474270 WBP1LQ9NX94 342 aa16.49■□□□□ 0.23
ABCD4-207ENST00000474270 PSME4Q14997 1843 aa16.49■□□□□ 0.23
ABCD4-207ENST00000474270 WDR33Q9C0J8 1336 aaKnown RBP16.48■□□□□ 0.23
ABCD4-207ENST00000474270 SCN9AQ15858 1988 aa16.48■□□□□ 0.23
ABCD4-207ENST00000474270 GRM1Q13255 1194 aa16.48■□□□□ 0.23
ABCD4-207ENST00000474270 DDX46Q7L014 1031 aaKnown RBP16.48■□□□□ 0.23
ABCD4-207ENST00000474270 TSR2Q969E8 191 aaKnown RBP16.48■□□□□ 0.23
ABCD4-207ENST00000474270 FAM89AQ96GI7 184 aa16.48■□□□□ 0.23
ABCD4-207ENST00000474270 SMC4Q9NTJ3 1288 aa16.48■□□□□ 0.23
ABCD4-207ENST00000474270 DPP8Q6V1X1 898 aaPredicted RBP16.47■□□□□ 0.23
ABCD4-207ENST00000474270 ISCA1Q9BUE6 129 aa16.47■□□□□ 0.23
ABCD4-207ENST00000474270 HYPKQ9NX55 129 aa16.47■□□□□ 0.23
ABCD4-207ENST00000474270 TRAF5O00463 557 aa16.46■□□□□ 0.23
ABCD4-207ENST00000474270 BBOX1O75936 387 aa16.46■□□□□ 0.23
ABCD4-207ENST00000474270 GRAPQ13588 217 aa16.46■□□□□ 0.23
ABCD4-207ENST00000474270 USP50Q70EL3 339 aaPredicted RBP16.46■□□□□ 0.23
ABCD4-207ENST00000474270 SP8Q8IXZ3 490 aa16.46■□□□□ 0.23
ABCD4-207ENST00000474270 FTSJ3Q8IY81 847 aaKnown RBP16.46■□□□□ 0.23
ABCD4-207ENST00000474270 MPNDQ8N594 471 aa16.46■□□□□ 0.23
ABCD4-207ENST00000474270 GRAPLQ8TC17 118 aaPredicted RBP16.46■□□□□ 0.23
ABCD4-207ENST00000474270 PHAXQ9H814 394 aaKnown RBP16.46■□□□□ 0.23
ABCD4-207ENST00000474270 MAP2K1Q02750 393 aaPredicted RBP16.45■□□□□ 0.22
ABCD4-207ENST00000474270 DZIP1LQ8IYY4 767 aaKnown RBP16.45■□□□□ 0.22
ABCD4-207ENST00000474270 SUPT20HQ8NEM7 779 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms