RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 FGD1P98174 961 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 PTH1RQ03431 593 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 NMIQ13287 307 aaPredicted RBP7.19□□□□□ -1.26
HERC4-209ENST00000473533 LARP1Q6PKG0 1096 aaKnown RBP7.19□□□□□ -1.26
HERC4-209ENST00000473533 ZNF397Q8NF99 534 aaPredicted RBP7.19□□□□□ -1.26
HERC4-209ENST00000473533 TPCN1Q9ULQ1 816 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 MED23Q9ULK4 1368 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 HSP90B1P14625 803 aaKnown RBP7.19□□□□□ -1.26
HERC4-209ENST00000473533 RBM6P78332 1123 aaKnown RBP7.19□□□□□ -1.26
HERC4-209ENST00000473533 CBX1P83916 185 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 PTPN14Q15678 1187 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 CEP135Q66GS9 1140 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 ABTB2Q8N961 1025 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 CCDC150Q8NCX0 1101 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 GTF3C6Q969F1 213 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 IL25Q9H293 177 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 PHRF1Q9P1Y6 1649 aaKnown RBP7.18□□□□□ -1.26
HERC4-209ENST00000473533 PLEKHG2Q9H7P9 1386 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 LARGE1O95461 756 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 KCNJ6P48051 423 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 USPL1Q5W0Q7 1092 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 CDC37L1Q7L3B6 337 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 KIF18AQ8NI77 898 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 ERO1AQ96HE7 468 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 NEK1Q96PY6 1258 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 ADCY9O60503 1353 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 ADCK5Q3MIX3 580 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 LUZP1Q86V48 1076 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 THEMISQ8N1K5 641 aaPredicted RBP7.18□□□□□ -1.26
HERC4-209ENST00000473533 MAP3K2Q9Y2U5 619 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 MRC1P22897 1456 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 NUTM2FA1L443 756 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 MYO1BO43795 1136 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 LIG1P18858 919 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 NUTM2GQ5VZR2 741 aa7.18□□□□□ -1.26
HERC4-209ENST00000473533 ZNF530Q6P9A1 599 aaPredicted RBP7.18□□□□□ -1.26
HERC4-209ENST00000473533 TPM1P09493 284 aa7.17□□□□□ -1.26
HERC4-209ENST00000473533 ATP5JP18859 108 aa7.17□□□□□ -1.26
HERC4-209ENST00000473533 KRT222Q8N1A0 295 aa7.17□□□□□ -1.26
HERC4-209ENST00000473533 NECAB1Q8N987 351 aa7.17□□□□□ -1.26
HERC4-209ENST00000473533 COL15A1P39059 1388 aa7.17□□□□□ -1.26
HERC4-209ENST00000473533 DHX16O60231 1041 aaKnown RBP7.17□□□□□ -1.26
HERC4-209ENST00000473533 RESTQ13127 1097 aa7.17□□□□□ -1.26
HERC4-209ENST00000473533 CAMK4Q16566 473 aa7.17□□□□□ -1.26
HERC4-209ENST00000473533 DDX21Q9NR30 783 aaKnown RBP eCLIP7.17□□□□□ -1.26
HERC4-209ENST00000473533 ARGLU1Q9NWB6 273 aaPredicted RBP7.17□□□□□ -1.26
HERC4-209ENST00000473533 FAM160A1Q05DH4 1040 aa7.16□□□□□ -1.26
HERC4-209ENST00000473533 NCBP1Q09161 790 aaKnown RBP7.16□□□□□ -1.26
HERC4-209ENST00000473533 TPRNQ4KMQ1 711 aa7.16□□□□□ -1.26
HERC4-209ENST00000473533 ZNF771Q7L3S4 317 aaPredicted RBP7.16□□□□□ -1.26
HERC4-209ENST00000473533 FERMT3Q86UX7 667 aa7.16□□□□□ -1.26
HERC4-209ENST00000473533 CKAP2LQ8IYA6 745 aa7.16□□□□□ -1.26
HERC4-209ENST00000473533 C16orf45Q96MC5 204 aaPredicted RBP7.16□□□□□ -1.26
HERC4-209ENST00000473533 RCOR1Q9UKL0 485 aa7.16□□□□□ -1.26
HERC4-209ENST00000473533 PFKFB2O60825 505 aa7.16□□□□□ -1.26
HERC4-209ENST00000473533 LRRC8AQ8IWT6 810 aa7.16□□□□□ -1.26
HERC4-209ENST00000473533 ARID3AQ99856 593 aa7.16□□□□□ -1.26
HERC4-209ENST00000473533 BPIFA3Q9BQP9 254 aa7.16□□□□□ -1.26
HERC4-209ENST00000473533 SRRTQ9BXP5 876 aaKnown RBP7.16□□□□□ -1.26
HERC4-209ENST00000473533 MORC2Q9Y6X9 1032 aaPredicted RBP7.16□□□□□ -1.26
HERC4-209ENST00000473533 RNMTO43148 476 aaKnown RBP7.16□□□□□ -1.26
HERC4-209ENST00000473533 SLU7O95391 586 aaKnown RBP7.16□□□□□ -1.26
HERC4-209ENST00000473533 CPA1P15085 419 aa7.16□□□□□ -1.26
HERC4-209ENST00000473533 MCMDC2Q4G0Z9 681 aa7.16□□□□□ -1.26
HERC4-209ENST00000473533 C17orf53Q8N3J3 647 aaPredicted RBP7.16□□□□□ -1.26
HERC4-209ENST00000473533 MPNDQ8N594 471 aa7.16□□□□□ -1.26
HERC4-209ENST00000473533 SMARCC2Q8TAQ2 1214 aa7.16□□□□□ -1.26
HERC4-209ENST00000473533 BRF1Q92994 677 aa7.16□□□□□ -1.26
HERC4-209ENST00000473533 LTV1Q96GA3 475 aaPredicted RBP7.16□□□□□ -1.26
HERC4-209ENST00000473533 DNAJC25Q9H1X3 360 aa7.16□□□□□ -1.26
HERC4-209ENST00000473533 DDX41Q9UJV9 622 aaKnown RBP7.16□□□□□ -1.26
HERC4-209ENST00000473533 NPHP4O75161 1426 aaPredicted RBP7.16□□□□□ -1.26
HERC4-209ENST00000473533 LTN1O94822 1766 aa7.16□□□□□ -1.26
HERC4-209ENST00000473533 A0A1W2PQ27 194 aa7.15□□□□□ -1.26
HERC4-209ENST00000473533 A0A1W2PQ64 194 aa7.15□□□□□ -1.26
HERC4-209ENST00000473533 A0A1W2PQD8 194 aa7.15□□□□□ -1.26
HERC4-209ENST00000473533 PSDA5PKW4 1024 aaPredicted RBP7.15□□□□□ -1.26
HERC4-209ENST00000473533 CBFA2T2O43439 604 aa7.15□□□□□ -1.26
HERC4-209ENST00000473533 TAF5LO75529 589 aa7.15□□□□□ -1.26
HERC4-209ENST00000473533 TOB2Q14106 344 aaPredicted RBP7.15□□□□□ -1.26
HERC4-209ENST00000473533 COPRSQ9NQ92 184 aa7.15□□□□□ -1.26
HERC4-209ENST00000473533 HELLSQ9NRZ9 838 aa7.15□□□□□ -1.26
HERC4-209ENST00000473533 CTNNA3Q9UI47 895 aa7.15□□□□□ -1.26
HERC4-209ENST00000473533 AP5Z1O43299 807 aa7.15□□□□□ -1.26
HERC4-209ENST00000473533 SKILP12757 684 aa7.15□□□□□ -1.26
HERC4-209ENST00000473533 ST3GAL1Q11201 340 aa7.15□□□□□ -1.26
HERC4-209ENST00000473533 RIC3Q7Z5B4 369 aa7.15□□□□□ -1.26
HERC4-209ENST00000473533 CCAR1Q8IX12 1150 aaKnown RBP7.15□□□□□ -1.26
HERC4-209ENST00000473533 KCNG4Q8TDN1 519 aa7.15□□□□□ -1.26
HERC4-209ENST00000473533 CHMP3Q9Y3E7 222 aa7.15□□□□□ -1.26
HERC4-209ENST00000473533 HEG1Q9ULI3 1381 aa7.15□□□□□ -1.26
HERC4-209ENST00000473533 SH3TC1Q8TE82 1336 aa7.15□□□□□ -1.27
HERC4-209ENST00000473533 BMS1Q14692 1282 aaKnown RBP7.15□□□□□ -1.27
HERC4-209ENST00000473533 DHX32Q7L7V1 743 aaKnown RBP7.15□□□□□ -1.27
HERC4-209ENST00000473533 C14orf37Q86TY3 774 aa7.15□□□□□ -1.27
HERC4-209ENST00000473533 FAM227BQ96M60 508 aa7.15□□□□□ -1.27
HERC4-209ENST00000473533 LARP6Q9BRS8 491 aaKnown RBP7.15□□□□□ -1.27
HERC4-209ENST00000473533 DSCC1Q9BVC3 393 aa7.15□□□□□ -1.27
HERC4-209ENST00000473533 OSBPL5Q9H0X9 879 aaPredicted RBP7.15□□□□□ -1.27
HERC4-209ENST00000473533 PRDM10Q9NQV6 1147 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms