RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 MTX1Q13505 466 aa15.67■□□□□ 0.1
TRAPPC12-217ENST00000473348 C3orf67Q6ZVT6 689 aa15.67■□□□□ 0.1
TRAPPC12-217ENST00000473348 RPAP2Q8IXW5 612 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC12-217ENST00000473348 SGIP1Q9BQI5 828 aa15.67■□□□□ 0.1
TRAPPC12-217ENST00000473348 CHMP3Q9Y3E7 222 aa15.67■□□□□ 0.1
TRAPPC12-217ENST00000473348 LRRC37AA6NMS7 1700 aa15.66■□□□□ 0.1
TRAPPC12-217ENST00000473348 RTL9Q8NET4 1388 aa15.66■□□□□ 0.1
TRAPPC12-217ENST00000473348 PTGER2P43116 358 aa15.66■□□□□ 0.1
TRAPPC12-217ENST00000473348 ATP8B2P98198 1209 aa15.66■□□□□ 0.1
TRAPPC12-217ENST00000473348 FAM161AQ3B820 660 aa15.66■□□□□ 0.1
TRAPPC12-217ENST00000473348 TTLL11Q8NHH1 800 aa15.66■□□□□ 0.1
TRAPPC12-217ENST00000473348 NLRP3Q96P20 1036 aa15.66■□□□□ 0.1
TRAPPC12-217ENST00000473348 CCDC85AQ96PX6 553 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC12-217ENST00000473348 BRIP1Q9BX63 1249 aa15.66■□□□□ 0.1
TRAPPC12-217ENST00000473348 GTF3C3Q9Y5Q9 886 aa15.66■□□□□ 0.1
TRAPPC12-217ENST00000473348 PNMA6EA0A0J9YXQ4 647 aa15.65■□□□□ 0.1
TRAPPC12-217ENST00000473348 SRGAP3O43295 1099 aa15.65■□□□□ 0.1
TRAPPC12-217ENST00000473348 CSF1RP07333 972 aa15.65■□□□□ 0.1
TRAPPC12-217ENST00000473348 CCDC152Q4G0S7 254 aa15.65■□□□□ 0.1
TRAPPC12-217ENST00000473348 SIRT2Q8IXJ6 389 aa15.65■□□□□ 0.1
TRAPPC12-217ENST00000473348 GREM2Q9H772 168 aa15.65■□□□□ 0.1
TRAPPC12-217ENST00000473348 SPON1Q9HCB6 807 aa15.65■□□□□ 0.1
TRAPPC12-217ENST00000473348 HMMRO75330 724 aa15.64■□□□□ 0.09
TRAPPC12-217ENST00000473348 SF3B3Q15393 1217 aaKnown RBP15.64■□□□□ 0.09
TRAPPC12-217ENST00000473348 PPP4R2Q9NY27 417 aa15.64■□□□□ 0.09
TRAPPC12-217ENST00000473348 SLX4Q8IY92 1834 aa15.64■□□□□ 0.09
TRAPPC12-217ENST00000473348 PDE6BP35913 854 aa15.63■□□□□ 0.09
TRAPPC12-217ENST00000473348 POLA2Q14181 598 aa15.63■□□□□ 0.09
TRAPPC12-217ENST00000473348 SSH3Q8TE77 659 aa15.63■□□□□ 0.09
TRAPPC12-217ENST00000473348 KLRG2A4D1S0 409 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC12-217ENST00000473348 ITGA6P23229 1130 aa15.62■□□□□ 0.09
TRAPPC12-217ENST00000473348 IFIT5Q13325 482 aaKnown RBP15.62■□□□□ 0.09
TRAPPC12-217ENST00000473348 HDAC1Q13547 482 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC12-217ENST00000473348 CCDC57Q2TAC2 916 aa15.62■□□□□ 0.09
TRAPPC12-217ENST00000473348 CRY2Q49AN0 593 aa15.62■□□□□ 0.09
TRAPPC12-217ENST00000473348 RPGRQ92834 1020 aaKnown RBP15.62■□□□□ 0.09
TRAPPC12-217ENST00000473348 CCDC136Q96JN2 1154 aa15.62■□□□□ 0.09
TRAPPC12-217ENST00000473348 ARFGEF1Q9Y6D6 1849 aa15.61■□□□□ 0.09
TRAPPC12-217ENST00000473348 ARAP2Q8WZ64 1704 aa15.61■□□□□ 0.09
TRAPPC12-217ENST00000473348 ANKRD18BA2A2Z9 1011 aa15.61■□□□□ 0.09
TRAPPC12-217ENST00000473348 RFX5P48382 616 aaPredicted RBP15.61■□□□□ 0.09
TRAPPC12-217ENST00000473348 TAF7LQ5H9L4 462 aa15.61■□□□□ 0.09
TRAPPC12-217ENST00000473348 RWDD1Q9H446 243 aaPredicted RBP15.61■□□□□ 0.09
TRAPPC12-217ENST00000473348 B4GALNT3Q6L9W6 998 aa15.6■□□□□ 0.09
TRAPPC12-217ENST00000473348 DDX46Q7L014 1031 aaKnown RBP15.6■□□□□ 0.09
TRAPPC12-217ENST00000473348 C2CD5Q86YS7 1000 aa15.6■□□□□ 0.09
TRAPPC12-217ENST00000473348 KLHDC4Q8TBB5 520 aa15.6■□□□□ 0.09
TRAPPC12-217ENST00000473348 SEC31BQ9NQW1 1179 aa15.6■□□□□ 0.09
TRAPPC12-217ENST00000473348 PA2G4Q9UQ80 394 aaKnown RBP15.6■□□□□ 0.09
TRAPPC12-217ENST00000473348 LTBP1Q14766 1721 aa15.6■□□□□ 0.09
TRAPPC12-217ENST00000473348 H0YIN7 160 aa15.59■□□□□ 0.09
TRAPPC12-217ENST00000473348 IGHDP01880 384 aa15.59■□□□□ 0.09
TRAPPC12-217ENST00000473348 SRGNP10124 158 aa15.59■□□□□ 0.09
TRAPPC12-217ENST00000473348 HOXA10P31260 410 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC12-217ENST00000473348 PTPN12Q05209 780 aaKnown RBP15.59■□□□□ 0.09
TRAPPC12-217ENST00000473348 KLHL34Q8N239 644 aa15.59■□□□□ 0.09
TRAPPC12-217ENST00000473348 ZNF594Q96JF6 807 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC12-217ENST00000473348 CDC5LQ99459 802 aaKnown RBP15.59■□□□□ 0.09
TRAPPC12-217ENST00000473348 COPRSQ9NQ92 184 aa15.59■□□□□ 0.09
TRAPPC12-217ENST00000473348 PDZRN3Q9UPQ7 1066 aa15.59■□□□□ 0.09
TRAPPC12-217ENST00000473348 MYH13Q9UKX3 1938 aa15.58■□□□□ 0.09
TRAPPC12-217ENST00000473348 NPR1P16066 1061 aa15.58■□□□□ 0.08
TRAPPC12-217ENST00000473348 CHRNA5P30532 468 aa15.58■□□□□ 0.08
TRAPPC12-217ENST00000473348 MASTLQ96GX5 879 aa15.58■□□□□ 0.08
TRAPPC12-217ENST00000473348 RBM17Q96I25 401 aaKnown RBP15.58■□□□□ 0.08
TRAPPC12-217ENST00000473348 SIL1Q9H173 461 aa15.58■□□□□ 0.08
TRAPPC12-217ENST00000473348 SURF6O75683 361 aaKnown RBP15.57■□□□□ 0.08
TRAPPC12-217ENST00000473348 IGHMBP2P38935 993 aaKnown RBP15.57■□□□□ 0.08
TRAPPC12-217ENST00000473348 GRAPQ13588 217 aa15.57■□□□□ 0.08
TRAPPC12-217ENST00000473348 ANKRD18AQ8IVF6 992 aa15.57■□□□□ 0.08
TRAPPC12-217ENST00000473348 GRAPLQ8TC17 118 aaPredicted RBP15.57■□□□□ 0.08
TRAPPC12-217ENST00000473348 CELF1Q92879 486 aaKnown RBP15.57■□□□□ 0.08
TRAPPC12-217ENST00000473348 PPP1R1BQ9UD71 204 aaPredicted RBP15.57■□□□□ 0.08
TRAPPC12-217ENST00000473348 EXOC6BQ9Y2D4 811 aa15.57■□□□□ 0.08
TRAPPC12-217ENST00000473348 CD2APQ9Y5K6 639 aa15.57■□□□□ 0.08
TRAPPC12-217ENST00000473348 STYK1Q6J9G0 422 aa15.56■□□□□ 0.08
TRAPPC12-217ENST00000473348 ZNF622Q969S3 477 aaKnown RBP eCLIP15.56■□□□□ 0.08
TRAPPC12-217ENST00000473348 CRAMP1Q96RY5 1269 aa15.56■□□□□ 0.08
TRAPPC12-217ENST00000473348 MPHOSPH8Q99549 860 aa15.56■□□□□ 0.08
TRAPPC12-217ENST00000473348 DCTPP1Q9H773 170 aa15.56■□□□□ 0.08
TRAPPC12-217ENST00000473348 NOP58Q9Y2X3 529 aaKnown RBP15.56■□□□□ 0.08
TRAPPC12-217ENST00000473348 KDM2BQ8NHM5 1336 aa15.56■□□□□ 0.08
TRAPPC12-217ENST00000473348 EYA2O00167 538 aa15.55■□□□□ 0.08
TRAPPC12-217ENST00000473348 DPEP1P16444 411 aa15.55■□□□□ 0.08
TRAPPC12-217ENST00000473348 TGFB2P61812 414 aa15.55■□□□□ 0.08
TRAPPC12-217ENST00000473348 RPS8P62241 208 aaKnown RBP15.55■□□□□ 0.08
TRAPPC12-217ENST00000473348 G3BP1Q13283 466 aaKnown RBP eCLIP15.55■□□□□ 0.08
TRAPPC12-217ENST00000473348 OS9Q13438 667 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC12-217ENST00000473348 LDHAL6AQ6ZMR3 332 aa15.55■□□□□ 0.08
TRAPPC12-217ENST00000473348 SMC5Q8IY18 1101 aa15.55■□□□□ 0.08
TRAPPC12-217ENST00000473348 GCC1Q96CN9 775 aa15.55■□□□□ 0.08
TRAPPC12-217ENST00000473348 PUS3Q9BZE2 481 aaKnown RBP15.55■□□□□ 0.08
TRAPPC12-217ENST00000473348 CNNM1Q9NRU3 951 aa15.55■□□□□ 0.08
TRAPPC12-217ENST00000473348 FBXO3Q9UK99 471 aa15.55■□□□□ 0.08
TRAPPC12-217ENST00000473348 FER1L6Q2WGJ9 1857 aa15.54■□□□□ 0.08
TRAPPC12-217ENST00000473348 A0A0G2JLW4 131 aa15.54■□□□□ 0.08
TRAPPC12-217ENST00000473348 APBB1O00213 710 aa15.54■□□□□ 0.08
TRAPPC12-217ENST00000473348 CIAO1O76071 339 aa15.54■□□□□ 0.08
TRAPPC12-217ENST00000473348 ALDH1B1P30837 517 aa15.54■□□□□ 0.08
TRAPPC12-217ENST00000473348 LRRC24Q50LG9 513 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms