RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	DPP8	Q6V1X1	898 aa	Predicted RBP	11.52	□□□□□ -0.57
CHEK2-223	ENST00000472807	TMC4	Q7Z404	712 aa		11.52	□□□□□ -0.57
CHEK2-223	ENST00000472807	SLC51A	Q86UW1	340 aa		11.52	□□□□□ -0.57
CHEK2-223	ENST00000472807	PNMA8A	Q86V59	439 aa	Predicted RBP	11.52	□□□□□ -0.57
CHEK2-223	ENST00000472807	GRAPL	Q8TC17	118 aa	Predicted RBP	11.52	□□□□□ -0.57
CHEK2-223	ENST00000472807	ZNF428	Q96B54	188 aa		11.52	□□□□□ -0.57
CHEK2-223	ENST00000472807	ISCA1	Q9BUE6	129 aa		11.52	□□□□□ -0.57
CHEK2-223	ENST00000472807	VPS33B	Q9H267	617 aa		11.52	□□□□□ -0.57
CHEK2-223	ENST00000472807	GJA3	Q9Y6H8	435 aa		11.52	□□□□□ -0.57
CHEK2-223	ENST00000472807	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.51	□□□□□ -0.57
CHEK2-223	ENST00000472807	HSP90B1	P14625	803 aa	Known RBP	11.51	□□□□□ -0.57
CHEK2-223	ENST00000472807	LMOD1	P29536	600 aa	Predicted RBP	11.51	□□□□□ -0.57
CHEK2-223	ENST00000472807	TRIM28	Q13263	835 aa	Known RBP	11.51	□□□□□ -0.57
CHEK2-223	ENST00000472807	AOC3	Q16853	763 aa		11.51	□□□□□ -0.57
CHEK2-223	ENST00000472807	CCDC27	Q2M243	656 aa		11.51	□□□□□ -0.57
CHEK2-223	ENST00000472807	CCDC184	Q52MB2	194 aa		11.51	□□□□□ -0.57
CHEK2-223	ENST00000472807	CCDC30	Q5VVM6	783 aa		11.51	□□□□□ -0.57
CHEK2-223	ENST00000472807	SP8	Q8IXZ3	490 aa		11.51	□□□□□ -0.57
CHEK2-223	ENST00000472807	JMY	Q8N9B5	988 aa		11.51	□□□□□ -0.57
CHEK2-223	ENST00000472807	C8orf58	Q8NAV2	365 aa		11.51	□□□□□ -0.57
CHEK2-223	ENST00000472807	FAM89A	Q96GI7	184 aa		11.51	□□□□□ -0.57
CHEK2-223	ENST00000472807	MRS2	Q9HD23	443 aa		11.51	□□□□□ -0.57
CHEK2-223	ENST00000472807	LRRC37A	A6NMS7	1700 aa		11.5	□□□□□ -0.57
CHEK2-223	ENST00000472807	DDX58	O95786	925 aa	Known RBP	11.5	□□□□□ -0.57
CHEK2-223	ENST00000472807	RTL5	Q5HYW3	569 aa	Predicted RBP	11.5	□□□□□ -0.57
CHEK2-223	ENST00000472807	MPND	Q8N594	471 aa		11.5	□□□□□ -0.57
CHEK2-223	ENST00000472807	TSR2	Q969E8	191 aa	Known RBP	11.5	□□□□□ -0.57
CHEK2-223	ENST00000472807	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.5	□□□□□ -0.57
CHEK2-223	ENST00000472807	PHAX	Q9H814	394 aa	Known RBP	11.5	□□□□□ -0.57
CHEK2-223	ENST00000472807	CREBZF	Q9NS37	354 aa		11.5	□□□□□ -0.57
CHEK2-223	ENST00000472807	CLEC11A	Q9Y240	323 aa		11.5	□□□□□ -0.57
CHEK2-223	ENST00000472807	TAF1	P21675	1872 aa		11.5	□□□□□ -0.57
CHEK2-223	ENST00000472807	ADAMTSL1	Q8N6G6	1762 aa		11.49	□□□□□ -0.57
CHEK2-223	ENST00000472807	IRS4	O14654	1257 aa	Predicted RBP	11.49	□□□□□ -0.57
CHEK2-223	ENST00000472807	WWC1	Q8IX03	1113 aa		11.49	□□□□□ -0.57
CHEK2-223	ENST00000472807	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.49	□□□□□ -0.57
CHEK2-223	ENST00000472807	MYD88	Q99836	296 aa		11.49	□□□□□ -0.57
CHEK2-223	ENST00000472807	STK31	Q9BXU1	1019 aa		11.49	□□□□□ -0.57
CHEK2-223	ENST00000472807	ZNRF3	Q9ULT6	936 aa		11.49	□□□□□ -0.57
CHEK2-223	ENST00000472807	KIAA2012	Q0VF49	1180 aa		11.48	□□□□□ -0.57
CHEK2-223	ENST00000472807	SF3B3	Q15393	1217 aa	Known RBP	11.48	□□□□□ -0.57
CHEK2-223	ENST00000472807	TSPYL6	Q8N831	410 aa		11.48	□□□□□ -0.57
CHEK2-223	ENST00000472807	CCDC191	Q8NCU4	936 aa		11.48	□□□□□ -0.57
CHEK2-223	ENST00000472807	CWC25	Q9NXE8	425 aa	Predicted RBP	11.48	□□□□□ -0.57
CHEK2-223	ENST00000472807	IL16	Q14005	1332 aa		11.48	□□□□□ -0.57
CHEK2-223	ENST00000472807	PASK	Q96RG2	1323 aa		11.48	□□□□□ -0.57
CHEK2-223	ENST00000472807	LTBP1	Q14766	1721 aa		11.47	□□□□□ -0.57
CHEK2-223	ENST00000472807	DUOX1	Q9NRD9	1551 aa		11.47	□□□□□ -0.57
CHEK2-223	ENST00000472807	SCNN1D	P51172	638 aa		11.47	□□□□□ -0.57
CHEK2-223	ENST00000472807	MAP1S	Q66K74	1059 aa	Predicted RBP	11.47	□□□□□ -0.57
CHEK2-223	ENST00000472807	CELF1	Q92879	486 aa	Known RBP	11.47	□□□□□ -0.57
CHEK2-223	ENST00000472807	METTL22	Q9BUU2	404 aa	Predicted RBP	11.47	□□□□□ -0.57
CHEK2-223	ENST00000472807	PCCA	P05165	728 aa	Predicted RBP	11.46	□□□□□ -0.57
CHEK2-223	ENST00000472807	EPS15	P42566	896 aa		11.46	□□□□□ -0.57
CHEK2-223	ENST00000472807	TWISTNB	Q3B726	338 aa	Predicted RBP	11.46	□□□□□ -0.57
CHEK2-223	ENST00000472807	CCDC152	Q4G0S7	254 aa		11.46	□□□□□ -0.57
CHEK2-223	ENST00000472807	IFFO2	Q5TF58	517 aa		11.46	□□□□□ -0.57
CHEK2-223	ENST00000472807	USP50	Q70EL3	339 aa	Predicted RBP	11.46	□□□□□ -0.57
CHEK2-223	ENST00000472807	CNTROB	Q8N137	903 aa		11.46	□□□□□ -0.57
CHEK2-223	ENST00000472807	MAP3K2	Q9Y2U5	619 aa		11.46	□□□□□ -0.57
CHEK2-223	ENST00000472807	CDHR2	Q9BYE9	1310 aa		11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	PI4KAP2	A4QPH2	592 aa		11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	TMEM88B	A6NKF7	163 aa		11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	PDE8A	O60658	829 aa		11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	ITGBL1	O95965	494 aa	Predicted RBP	11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	SLC4A2	P04920	1241 aa		11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	GMPS	P49915	693 aa	Predicted RBP	11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	CXCL9	Q07325	125 aa		11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	NEXN	Q0ZGT2	675 aa		11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	TNIP1	Q15025	636 aa		11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	WASHC4	Q2M389	1173 aa		11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	CIAPIN1	Q6FI81	312 aa		11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	KSR2	Q6VAB6	950 aa		11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	PI4KAP1	Q8N8J0	262 aa		11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	GPRC5D	Q9NZD1	345 aa		11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	MKRN1	Q9UHC7	482 aa	Known RBP	11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.45	□□□□□ -0.58
CHEK2-223	ENST00000472807	CNTNAP1	P78357	1384 aa		11.44	□□□□□ -0.58
CHEK2-223	ENST00000472807	FANCI	Q9NVI1	1328 aa		11.44	□□□□□ -0.58
CHEK2-223	ENST00000472807	COL4A1	P02462	1669 aa		11.44	□□□□□ -0.58
CHEK2-223	ENST00000472807	C6orf229	H3BNL8	230 aa		11.44	□□□□□ -0.58
CHEK2-223	ENST00000472807	RAD17	O75943	681 aa		11.44	□□□□□ -0.58
CHEK2-223	ENST00000472807	RPS8	P62241	208 aa	Known RBP	11.44	□□□□□ -0.58
CHEK2-223	ENST00000472807	GPSM2	P81274	684 aa		11.44	□□□□□ -0.58
CHEK2-223	ENST00000472807	EYA3	Q99504	573 aa		11.44	□□□□□ -0.58
CHEK2-223	ENST00000472807	BCL2L13	Q9BXK5	485 aa		11.44	□□□□□ -0.58
CHEK2-223	ENST00000472807	ADARB2	Q9NS39	739 aa	Known RBP	11.44	□□□□□ -0.58
CHEK2-223	ENST00000472807	CACNA1F	O60840	1977 aa		11.43	□□□□□ -0.58
CHEK2-223	ENST00000472807	MYH3	P11055	1940 aa		11.43	□□□□□ -0.58
CHEK2-223	ENST00000472807	HSPA1A	P0DMV8	641 aa	Known RBP	11.43	□□□□□ -0.58
CHEK2-223	ENST00000472807	HSPA1B	P0DMV9	641 aa	Known RBP	11.43	□□□□□ -0.58
CHEK2-223	ENST00000472807	WDR63	Q8IWG1	891 aa		11.43	□□□□□ -0.58
CHEK2-223	ENST00000472807	SEC31B	Q9NQW1	1179 aa		11.43	□□□□□ -0.58
CHEK2-223	ENST00000472807	ANKIB1	Q9P2G1	1089 aa		11.43	□□□□□ -0.58
CHEK2-223	ENST00000472807	SALL2	Q9Y467	1007 aa	Predicted RBP	11.43	□□□□□ -0.58
CHEK2-223	ENST00000472807	YDJC	A8MPS7	323 aa		11.42	□□□□□ -0.58
CHEK2-223	ENST00000472807	CTSW	P56202	376 aa		11.42	□□□□□ -0.58
CHEK2-223	ENST00000472807	TBC1D16	Q8TBP0	767 aa		11.42	□□□□□ -0.58
CHEK2-223	ENST00000472807	JARID2	Q92833	1246 aa	Predicted RBP	11.42	□□□□□ -0.58
CHEK2-223	ENST00000472807	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms