RNA–Protein interactions for RNA: ENST00000472478.6

BRD8-219, Transcript of bromodomain containing 8, humanhuman

TSL 3

Gene BRD8, Length 745 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8-219ENST00000472478 SLC39A6Q13433 755 aa13.35□□□□□ -0.27
BRD8-219ENST00000472478 DNAJC10Q8IXB1 793 aa13.35□□□□□ -0.27
BRD8-219ENST00000472478 ZNF784Q8NCA9 323 aaPredicted RBP13.35□□□□□ -0.27
BRD8-219ENST00000472478 UBR3Q6ZT12 1888 aa13.34□□□□□ -0.27
BRD8-219ENST00000472478 INTS5Q6P9B9 1019 aaKnown RBP13.34□□□□□ -0.27
BRD8-219ENST00000472478 IL17REQ8NFR9 667 aa13.34□□□□□ -0.27
BRD8-219ENST00000472478 A0A087WZG4 1122 aa13.33□□□□□ -0.28
BRD8-219ENST00000472478 HTATSF1O43719 755 aaKnown RBP13.33□□□□□ -0.28
BRD8-219ENST00000472478 CYP19A1P11511 503 aaPredicted RBP13.33□□□□□ -0.28
BRD8-219ENST00000472478 YBX3P16989 372 aaKnown RBP eCLIP13.33□□□□□ -0.28
BRD8-219ENST00000472478 ZNF790Q6PG37 636 aa13.33□□□□□ -0.28
BRD8-219ENST00000472478 ADAM33Q9BZ11 813 aa13.33□□□□□ -0.28
BRD8-219ENST00000472478 DNAJB2P25686 324 aa13.32□□□□□ -0.28
BRD8-219ENST00000472478 CSPP1Q1MSJ5 1256 aa13.32□□□□□ -0.28
BRD8-219ENST00000472478 HDGFL1Q5TGJ6 251 aa13.32□□□□□ -0.28
BRD8-219ENST00000472478 FMNL2Q96PY5 1086 aa13.32□□□□□ -0.28
BRD8-219ENST00000472478 USP42Q9H9J4 1324 aaKnown RBP13.32□□□□□ -0.28
BRD8-219ENST00000472478 COL3A1P02461 1466 aaPredicted RBP13.31□□□□□ -0.28
BRD8-219ENST00000472478 SCN11AQ9UI33 1791 aa13.31□□□□□ -0.28
BRD8-219ENST00000472478 BTBD11A6QL63 1104 aa13.31□□□□□ -0.28
BRD8-219ENST00000472478 RTL5Q5HYW3 569 aaPredicted RBP13.31□□□□□ -0.28
BRD8-219ENST00000472478 PHACTR3Q96KR7 559 aa13.31□□□□□ -0.28
BRD8-219ENST00000472478 NARFQ9UHQ1 456 aa13.31□□□□□ -0.28
BRD8-219ENST00000472478 RALBP1Q15311 655 aa13.3□□□□□ -0.28
BRD8-219ENST00000472478 ZBTB3Q9H5J0 574 aa13.3□□□□□ -0.28
BRD8-219ENST00000472478 SOS1Q07889 1333 aaPredicted RBP13.3□□□□□ -0.28
BRD8-219ENST00000472478 DDX11L8A8MPP1 907 aa13.29□□□□□ -0.28
BRD8-219ENST00000472478 CANXP27824 592 aaKnown RBP13.29□□□□□ -0.28
BRD8-219ENST00000472478 TM4SF1P30408 202 aa13.29□□□□□ -0.28
BRD8-219ENST00000472478 USP46P62068 366 aa13.29□□□□□ -0.28
BRD8-219ENST00000472478 USPL1Q5W0Q7 1092 aa13.29□□□□□ -0.28
BRD8-219ENST00000472478 SRP68Q9UHB9 627 aaKnown RBP13.29□□□□□ -0.28
BRD8-219ENST00000472478 PCDHB15Q9Y5E8 787 aa13.29□□□□□ -0.28
BRD8-219ENST00000472478 MRC1P22897 1456 aa13.29□□□□□ -0.28
BRD8-219ENST00000472478 A0A0G2JLW4 131 aa13.28□□□□□ -0.28
BRD8-219ENST00000472478 NDUFV2P19404 249 aa13.28□□□□□ -0.28
BRD8-219ENST00000472478 ZNF496Q96IT1 587 aaPredicted RBP13.28□□□□□ -0.28
BRD8-219ENST00000472478 TMEM134Q9H6X4 195 aa13.28□□□□□ -0.28
BRD8-219ENST00000472478 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.28□□□□□ -0.28
BRD8-219ENST00000472478 PIM2Q9P1W9 311 aa13.28□□□□□ -0.28
BRD8-219ENST00000472478 ZBTB1Q9Y2K1 713 aa13.28□□□□□ -0.28
BRD8-219ENST00000472478 CHD4Q14839 1912 aa13.28□□□□□ -0.28
BRD8-219ENST00000472478 CEMIPQ8WUJ3 1361 aa13.28□□□□□ -0.28
BRD8-219ENST00000472478 HEG1Q9ULI3 1381 aa13.28□□□□□ -0.28
BRD8-219ENST00000472478 TAF7Q15545 349 aaPredicted RBP13.27□□□□□ -0.29
BRD8-219ENST00000472478 ADAMTS19Q8TE59 1207 aa13.27□□□□□ -0.29
BRD8-219ENST00000472478 PNISRQ8TF01 805 aaKnown RBP13.27□□□□□ -0.29
BRD8-219ENST00000472478 FAM198AQ9UFP1 575 aa13.27□□□□□ -0.29
BRD8-219ENST00000472478 BCS1LQ9Y276 419 aa13.27□□□□□ -0.29
BRD8-219ENST00000472478 COL5A3P25940 1745 aaPredicted RBP13.27□□□□□ -0.29
BRD8-219ENST00000472478 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.26□□□□□ -0.29
BRD8-219ENST00000472478 SNRPA1P09661 255 aaKnown RBP13.26□□□□□ -0.29
BRD8-219ENST00000472478 DPEP1P16444 411 aa13.26□□□□□ -0.29
BRD8-219ENST00000472478 COL15A1P39059 1388 aa13.26□□□□□ -0.29
BRD8-219ENST00000472478 IL6STP40189 918 aaPredicted RBP13.26□□□□□ -0.29
BRD8-219ENST00000472478 EIF5P55010 431 aaKnown RBP13.26□□□□□ -0.29
BRD8-219ENST00000472478 PPP1R12CQ9BZL4 782 aa13.26□□□□□ -0.29
BRD8-219ENST00000472478 MAPK8IP3Q9UPT6 1336 aa13.25□□□□□ -0.29
BRD8-219ENST00000472478 NBPF26B4DH59 902 aa13.25□□□□□ -0.29
BRD8-219ENST00000472478 POLRMTO00411 1230 aaKnown RBP13.25□□□□□ -0.29
BRD8-219ENST00000472478 GIGYF1O75420 1035 aaPredicted RBP13.25□□□□□ -0.29
BRD8-219ENST00000472478 ARHGAP27Q6ZUM4 889 aa13.25□□□□□ -0.29
BRD8-219ENST00000472478 WWC3Q9ULE0 1092 aa13.25□□□□□ -0.29
BRD8-219ENST00000472478 PDZRN3Q9UPQ7 1066 aa13.25□□□□□ -0.29
BRD8-219ENST00000472478 KDM4AO75164 1064 aa13.24□□□□□ -0.29
BRD8-219ENST00000472478 SERPINB2P05120 415 aa13.24□□□□□ -0.29
BRD8-219ENST00000472478 DDX10Q13206 875 aaKnown RBP13.24□□□□□ -0.29
BRD8-219ENST00000472478 NFIXQ14938 502 aa13.24□□□□□ -0.29
BRD8-219ENST00000472478 DALRD3Q5D0E6 543 aaKnown RBP13.24□□□□□ -0.29
BRD8-219ENST00000472478 MCM10Q7L590 875 aa13.24□□□□□ -0.29
BRD8-219ENST00000472478 ADAMTS7Q9UKP4 1686 aa13.24□□□□□ -0.29
BRD8-219ENST00000472478 CICQ96RK0 1608 aaPredicted RBP13.24□□□□□ -0.29
BRD8-219ENST00000472478 KCPQ6ZWJ8 1503 aa13.23□□□□□ -0.29
BRD8-219ENST00000472478 MYH14Q7Z406 1995 aaKnown RBP13.23□□□□□ -0.29
BRD8-219ENST00000472478 C10orf71Q711Q0 1435 aa13.23□□□□□ -0.29
BRD8-219ENST00000472478 C1QTNF8P60827 252 aa13.23□□□□□ -0.29
BRD8-219ENST00000472478 DDR1Q08345 913 aa13.23□□□□□ -0.29
BRD8-219ENST00000472478 FOXD4L5Q5VV16 416 aaPredicted RBP13.23□□□□□ -0.29
BRD8-219ENST00000472478 FOXD4L4Q8WXT5 416 aaPredicted RBP13.23□□□□□ -0.29
BRD8-219ENST00000472478 NPHP1O15259 732 aa13.22□□□□□ -0.29
BRD8-219ENST00000472478 A1BGP04217 495 aa13.22□□□□□ -0.29
BRD8-219ENST00000472478 SOX11P35716 441 aa13.22□□□□□ -0.29
BRD8-219ENST00000472478 RBM25P49756 843 aaKnown RBP13.22□□□□□ -0.29
BRD8-219ENST00000472478 NFE2L2Q16236 605 aa13.22□□□□□ -0.29
BRD8-219ENST00000472478 NUDT18Q6ZVK8 323 aa13.22□□□□□ -0.29
BRD8-219ENST00000472478 SETDB2Q96T68 719 aa13.22□□□□□ -0.29
BRD8-219ENST00000472478 PXDNLA1KZ92 1463 aa13.22□□□□□ -0.29
BRD8-219ENST00000472478 C4AP0C0L4 1744 aa13.22□□□□□ -0.29
BRD8-219ENST00000472478 TJP1Q07157 1748 aa13.22□□□□□ -0.29
BRD8-219ENST00000472478 H0YIN7 160 aa13.21□□□□□ -0.29
BRD8-219ENST00000472478 KCNQ3O43525 872 aa13.21□□□□□ -0.29
BRD8-219ENST00000472478 KCNA3P22001 575 aa13.21□□□□□ -0.29
BRD8-219ENST00000472478 RFX1P22670 979 aa13.21□□□□□ -0.29
BRD8-219ENST00000472478 DCTN1Q14203 1278 aa13.21□□□□□ -0.29
BRD8-219ENST00000472478 BICDL1Q6ZP65 573 aa13.21□□□□□ -0.29
BRD8-219ENST00000472478 FAM163AQ96GL9 167 aaPredicted RBP13.21□□□□□ -0.29
BRD8-219ENST00000472478 ALG2Q9H553 416 aa13.21□□□□□ -0.29
BRD8-219ENST00000472478 TSKSQ9UJT2 592 aa13.21□□□□□ -0.29
BRD8-219ENST00000472478 ZNF652Q9Y2D9 606 aa13.21□□□□□ -0.29
BRD8-219ENST00000472478 USP16Q9Y5T5 823 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms