RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 FRAT1Q92837 279 aaPredicted RBP19.09■□□□□ 0.65
SNX13-205ENST00000471744 CASP7P55210 303 aa19.08■□□□□ 0.64
SNX13-205ENST00000471744 FER1L6Q2WGJ9 1857 aa19.07■□□□□ 0.64
SNX13-205ENST00000471744 ABCC4O15439 1325 aa19.07■□□□□ 0.64
SNX13-205ENST00000471744 BBOX1O75936 387 aa19.07■□□□□ 0.64
SNX13-205ENST00000471744 CTSWP56202 376 aa19.07■□□□□ 0.64
SNX13-205ENST00000471744 GRAPQ13588 217 aa19.07■□□□□ 0.64
SNX13-205ENST00000471744 GRIPAP1Q4V328 841 aa19.07■□□□□ 0.64
SNX13-205ENST00000471744 CC2D2BQ6DHV5 1058 aa19.07■□□□□ 0.64
SNX13-205ENST00000471744 TMC4Q7Z404 712 aa19.07■□□□□ 0.64
SNX13-205ENST00000471744 GRAPLQ8TC17 118 aaPredicted RBP19.07■□□□□ 0.64
SNX13-205ENST00000471744 JARID2Q92833 1246 aaPredicted RBP19.07■□□□□ 0.64
SNX13-205ENST00000471744 TMX4Q9H1E5 349 aaPredicted RBP19.07■□□□□ 0.64
SNX13-205ENST00000471744 RCAN3Q9UKA8 241 aa19.07■□□□□ 0.64
SNX13-205ENST00000471744 UTYO14607 1347 aa19.06■□□□□ 0.64
SNX13-205ENST00000471744 C21orf2O43822 256 aa19.06■□□□□ 0.64
SNX13-205ENST00000471744 TRIM27P14373 513 aa19.06■□□□□ 0.64
SNX13-205ENST00000471744 ARHGAP27Q6ZUM4 889 aa19.06■□□□□ 0.64
SNX13-205ENST00000471744 HDAC5Q9UQL6 1122 aa19.06■□□□□ 0.64
SNX13-205ENST00000471744 RTL9Q8NET4 1388 aa19.06■□□□□ 0.64
SNX13-205ENST00000471744 TAF1P21675 1872 aa19.05■□□□□ 0.64
SNX13-205ENST00000471744 CCDC93Q567U6 631 aa19.05■□□□□ 0.64
SNX13-205ENST00000471744 INTS3Q68E01 1043 aaKnown RBP19.05■□□□□ 0.64
SNX13-205ENST00000471744 C7orf43Q8WVR3 580 aa19.05■□□□□ 0.64
SNX13-205ENST00000471744 SBF1O95248 1867 aa19.05■□□□□ 0.64
SNX13-205ENST00000471744 PPEF1O14829 653 aaPredicted RBP19.04■□□□□ 0.64
SNX13-205ENST00000471744 MS4A1P11836 297 aa19.04■□□□□ 0.64
SNX13-205ENST00000471744 RTKN2Q8IZC4 609 aa19.04■□□□□ 0.64
SNX13-205ENST00000471744 TTLL11Q8NHH1 800 aa19.04■□□□□ 0.64
SNX13-205ENST00000471744 FTSJ3Q8IY81 847 aaKnown RBP19.03■□□□□ 0.64
SNX13-205ENST00000471744 CDC5LQ99459 802 aaKnown RBP19.03■□□□□ 0.64
SNX13-205ENST00000471744 CCDC88AQ3V6T2 1871 aa19.03■□□□□ 0.64
SNX13-205ENST00000471744 LTBP3Q9NS15 1303 aa19.02■□□□□ 0.64
SNX13-205ENST00000471744 CSF1RP07333 972 aa19.02■□□□□ 0.64
SNX13-205ENST00000471744 USP44Q9H0E7 712 aa19.02■□□□□ 0.64
SNX13-205ENST00000471744 ZNF219Q9P2Y4 722 aaPredicted RBP19.02■□□□□ 0.64
SNX13-205ENST00000471744 ATP6V0A2Q9Y487 856 aa19.02■□□□□ 0.64
SNX13-205ENST00000471744 NBPF7P0C2Y1 421 aaPredicted RBP19.01■□□□□ 0.63
SNX13-205ENST00000471744 RPS8P62241 208 aaKnown RBP19.01■□□□□ 0.63
SNX13-205ENST00000471744 SP8Q8IXZ3 490 aa19.01■□□□□ 0.63
SNX13-205ENST00000471744 DZIP1LQ8IYY4 767 aaKnown RBP19.01■□□□□ 0.63
SNX13-205ENST00000471744 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.01■□□□□ 0.63
SNX13-205ENST00000471744 LRRC37AA6NMS7 1700 aa19■□□□□ 0.63
SNX13-205ENST00000471744 DICER1Q9UPY3 1922 aaKnown RBP19■□□□□ 0.63
SNX13-205ENST00000471744 UBTFL1P0CB47 393 aaPredicted RBP19■□□□□ 0.63
SNX13-205ENST00000471744 ANKRD18AQ8IVF6 992 aa19■□□□□ 0.63
SNX13-205ENST00000471744 CLUAP1Q96AJ1 413 aa19■□□□□ 0.63
SNX13-205ENST00000471744 TAOK3Q9H2K8 898 aa19■□□□□ 0.63
SNX13-205ENST00000471744 GNAI3P08754 354 aa18.99■□□□□ 0.63
SNX13-205ENST00000471744 FOXO4P98177 505 aa18.99■□□□□ 0.63
SNX13-205ENST00000471744 CELF1Q92879 486 aaKnown RBP18.99■□□□□ 0.63
SNX13-205ENST00000471744 SUCLG2Q96I99 432 aa18.99■□□□□ 0.63
SNX13-205ENST00000471744 CCDC85AQ96PX6 553 aaPredicted RBP18.99■□□□□ 0.63
SNX13-205ENST00000471744 GREM2Q9H772 168 aa18.99■□□□□ 0.63
SNX13-205ENST00000471744 SEC31BQ9NQW1 1179 aa18.99■□□□□ 0.63
SNX13-205ENST00000471744 GOLGB1Q14789 3259 aaKnown RBP18.98■□□□□ 0.63
SNX13-205ENST00000471744 NFKBIEO00221 500 aa18.98■□□□□ 0.63
SNX13-205ENST00000471744 LMNB1P20700 586 aa18.98■□□□□ 0.63
SNX13-205ENST00000471744 FKBP4Q02790 459 aaKnown RBP eCLIP18.98■□□□□ 0.63
SNX13-205ENST00000471744 LMBR1LQ6UX01 489 aa18.98■□□□□ 0.63
SNX13-205ENST00000471744 PSMD1Q99460 953 aa18.98■□□□□ 0.63
SNX13-205ENST00000471744 SPEF2Q9C093 1822 aa18.97■□□□□ 0.63
SNX13-205ENST00000471744 ANKRD18BA2A2Z9 1011 aa18.97■□□□□ 0.63
SNX13-205ENST00000471744 ITGA6P23229 1130 aa18.97■□□□□ 0.63
SNX13-205ENST00000471744 IGHMBP2P38935 993 aaKnown RBP18.97■□□□□ 0.63
SNX13-205ENST00000471744 IFIT5Q13325 482 aaKnown RBP18.97■□□□□ 0.63
SNX13-205ENST00000471744 FAM161AQ3B820 660 aa18.97■□□□□ 0.63
SNX13-205ENST00000471744 RABL6Q3YEC7 729 aaPredicted RBP18.97■□□□□ 0.63
SNX13-205ENST00000471744 CHMP3Q9Y3E7 222 aa18.97■□□□□ 0.63
SNX13-205ENST00000471744 SNED1Q8TER0 1413 aa18.97■□□□□ 0.63
SNX13-205ENST00000471744 RASSF7Q02833 373 aa18.96■□□□□ 0.63
SNX13-205ENST00000471744 CCDC57Q2TAC2 916 aa18.96■□□□□ 0.63
SNX13-205ENST00000471744 EPHA10Q5JZY3 1008 aa18.96■□□□□ 0.63
SNX13-205ENST00000471744 TMEM57Q8N5G2 664 aa18.96■□□□□ 0.63
SNX13-205ENST00000471744 SUPT20HQ8NEM7 779 aa18.96■□□□□ 0.63
SNX13-205ENST00000471744 BSDC1Q9NW68 430 aaPredicted RBP18.96■□□□□ 0.63
SNX13-205ENST00000471744 RNF216Q9NWF9 866 aaPredicted RBP18.96■□□□□ 0.63
SNX13-205ENST00000471744 TNNQ9UQP3 1299 aa18.96■□□□□ 0.63
SNX13-205ENST00000471744 HOXD11P31277 338 aaPredicted RBP18.95■□□□□ 0.62
SNX13-205ENST00000471744 OLFM4Q6UX06 510 aa18.95■□□□□ 0.62
SNX13-205ENST00000471744 MPNDQ8N594 471 aa18.95■□□□□ 0.62
SNX13-205ENST00000471744 KAZALD1Q96I82 304 aa18.95■□□□□ 0.62
SNX13-205ENST00000471744 VPS33BQ9H267 617 aa18.95■□□□□ 0.62
SNX13-205ENST00000471744 BICC1Q9H694 974 aaKnown RBP18.95■□□□□ 0.62
SNX13-205ENST00000471744 ZC3H4Q9UPT8 1303 aaKnown RBP18.95■□□□□ 0.62
SNX13-205ENST00000471744 YY1P25490 414 aa18.94■□□□□ 0.62
SNX13-205ENST00000471744 C9orf131Q5VYM1 1079 aa18.94■□□□□ 0.62
SNX13-205ENST00000471744 DPP8Q6V1X1 898 aaPredicted RBP18.94■□□□□ 0.62
SNX13-205ENST00000471744 ITPRIPQ8IWB1 547 aa18.94■□□□□ 0.62
SNX13-205ENST00000471744 MPHOSPH8Q99549 860 aa18.94■□□□□ 0.62
SNX13-205ENST00000471744 MEIS3Q99687 375 aa18.94■□□□□ 0.62
SNX13-205ENST00000471744 RNF181Q9P0P0 153 aa18.94■□□□□ 0.62
SNX13-205ENST00000471744 COL4A1P02462 1669 aa18.94■□□□□ 0.62
SNX13-205ENST00000471744 TAF7LQ5H9L4 462 aa18.93■□□□□ 0.62
SNX13-205ENST00000471744 ANKRD44Q8N8A2 993 aa18.93■□□□□ 0.62
SNX13-205ENST00000471744 RTFDC1Q9BY42 306 aaPredicted RBP18.93■□□□□ 0.62
SNX13-205ENST00000471744 UTRNP46939 3433 aa18.93■□□□□ 0.62
SNX13-205ENST00000471744 RLBP1P12271 317 aa18.92■□□□□ 0.62
SNX13-205ENST00000471744 PDE3AQ14432 1141 aa18.92■□□□□ 0.62
SNX13-205ENST00000471744 CHMP4BQ9H444 224 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms