RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 A0A0A0MRY4 1105 aa7.31□□□□□ -1.24
PRPF40A-207ENST00000471701 OPLAHO14841 1288 aa7.31□□□□□ -1.24
PRPF40A-207ENST00000471701 BRD2P25440 801 aaKnown RBP7.31□□□□□ -1.24
PRPF40A-207ENST00000471701 AFF1P51825 1210 aaKnown RBP7.31□□□□□ -1.24
PRPF40A-207ENST00000471701 FKBP5Q13451 457 aaPredicted RBP7.31□□□□□ -1.24
PRPF40A-207ENST00000471701 COX20Q5RI15 118 aa7.31□□□□□ -1.24
PRPF40A-207ENST00000471701 TREML1Q86YW5 311 aa7.31□□□□□ -1.24
PRPF40A-207ENST00000471701 DMRTC2Q8IXT2 367 aaPredicted RBP7.31□□□□□ -1.24
PRPF40A-207ENST00000471701 LRFN2Q9ULH4 789 aa7.31□□□□□ -1.24
PRPF40A-207ENST00000471701 RGL4Q8IZJ4 473 aa7.3□□□□□ -1.24
PRPF40A-207ENST00000471701 TRPM4Q8TD43 1214 aa7.3□□□□□ -1.24
PRPF40A-207ENST00000471701 ZFATQ9P243 1243 aa7.3□□□□□ -1.24
PRPF40A-207ENST00000471701 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.29□□□□□ -1.24
PRPF40A-207ENST00000471701 XYLBO75191 536 aa7.29□□□□□ -1.24
PRPF40A-207ENST00000471701 ELNP15502 786 aa7.29□□□□□ -1.24
PRPF40A-207ENST00000471701 GRNP28799 593 aaKnown RBP7.29□□□□□ -1.24
PRPF40A-207ENST00000471701 NRG1Q02297 640 aaPredicted RBP7.29□□□□□ -1.24
PRPF40A-207ENST00000471701 CCDC97Q96F63 343 aaPredicted RBP7.29□□□□□ -1.24
PRPF40A-207ENST00000471701 FRRS1LQ9P0K9 344 aa7.29□□□□□ -1.24
PRPF40A-207ENST00000471701 USP20Q9Y2K6 914 aa7.29□□□□□ -1.24
PRPF40A-207ENST00000471701 ZBTB42B2RXF5 422 aa7.28□□□□□ -1.24
PRPF40A-207ENST00000471701 ATG7O95352 703 aa7.28□□□□□ -1.24
PRPF40A-207ENST00000471701 EGFRP00533 1210 aa7.28□□□□□ -1.24
PRPF40A-207ENST00000471701 MLLT1Q03111 559 aaPredicted RBP7.28□□□□□ -1.24
PRPF40A-207ENST00000471701 MSL1Q68DK7 614 aa7.28□□□□□ -1.24
PRPF40A-207ENST00000471701 C16orf46Q6P387 395 aa7.28□□□□□ -1.24
PRPF40A-207ENST00000471701 FAM13BQ9NYF5 915 aa7.28□□□□□ -1.24
PRPF40A-207ENST00000471701 TLR7Q9NYK1 1049 aaKnown RBP7.28□□□□□ -1.24
PRPF40A-207ENST00000471701 SERPINA10Q9UK55 444 aa7.28□□□□□ -1.24
PRPF40A-207ENST00000471701 ZMIZ1Q9ULJ6 1067 aa7.28□□□□□ -1.24
PRPF40A-207ENST00000471701 PTCD1O75127 700 aaKnown RBP7.27□□□□□ -1.25
PRPF40A-207ENST00000471701 PSAPP07602 524 aa7.27□□□□□ -1.25
PRPF40A-207ENST00000471701 GPLD1P80108 840 aa7.27□□□□□ -1.25
PRPF40A-207ENST00000471701 PERM1Q5SV97 790 aa7.27□□□□□ -1.25
PRPF40A-207ENST00000471701 HFE2Q6ZVN8 426 aa7.27□□□□□ -1.25
PRPF40A-207ENST00000471701 STK32AQ8WU08 396 aa7.27□□□□□ -1.25
PRPF40A-207ENST00000471701 TTC9Q92623 222 aa7.27□□□□□ -1.25
PRPF40A-207ENST00000471701 COL26A1Q96A83 441 aa7.27□□□□□ -1.25
PRPF40A-207ENST00000471701 LENG1Q96BZ8 264 aaPredicted RBP7.27□□□□□ -1.25
PRPF40A-207ENST00000471701 RBSNQ9H1K0 784 aa7.27□□□□□ -1.25
PRPF40A-207ENST00000471701 NAGPAQ9UK23 515 aa7.27□□□□□ -1.25
PRPF40A-207ENST00000471701 USP21Q9UK80 565 aa7.27□□□□□ -1.25
PRPF40A-207ENST00000471701 SELPP16109 830 aa7.26□□□□□ -1.25
PRPF40A-207ENST00000471701 NRLP54845 237 aa7.26□□□□□ -1.25
PRPF40A-207ENST00000471701 SRPK2P78362 688 aaKnown RBP7.26□□□□□ -1.25
PRPF40A-207ENST00000471701 PLAURQ03405 335 aa7.26□□□□□ -1.25
PRPF40A-207ENST00000471701 FAM69CQ0P6D2 419 aa7.26□□□□□ -1.25
PRPF40A-207ENST00000471701 NAA30Q147X3 362 aaPredicted RBP7.26□□□□□ -1.25
PRPF40A-207ENST00000471701 OCLNQ16625 522 aa7.26□□□□□ -1.25
PRPF40A-207ENST00000471701 WFDC8Q8IUA0 241 aa7.26□□□□□ -1.25
PRPF40A-207ENST00000471701 DTWD1Q8N5C7 304 aa7.26□□□□□ -1.25
PRPF40A-207ENST00000471701 PIK3R5Q8WYR1 880 aa7.26□□□□□ -1.25
PRPF40A-207ENST00000471701 LPIN3Q9BQK8 851 aa7.26□□□□□ -1.25
PRPF40A-207ENST00000471701 MKNK1Q9BUB5 465 aa7.26□□□□□ -1.25
PRPF40A-207ENST00000471701 SAP130Q9H0E3 1048 aa7.26□□□□□ -1.25
PRPF40A-207ENST00000471701 TPSG1Q9NRR2 321 aa7.26□□□□□ -1.25
PRPF40A-207ENST00000471701 LOC102724428A0A0B4J2F2 783 aa7.25□□□□□ -1.25
PRPF40A-207ENST00000471701 GHRHP01286 108 aa7.25□□□□□ -1.25
PRPF40A-207ENST00000471701 EIF2AK2P19525 551 aaKnown RBP7.25□□□□□ -1.25
PRPF40A-207ENST00000471701 SIK1P57059 783 aa7.25□□□□□ -1.25
PRPF40A-207ENST00000471701 FMR1NBQ8N0W7 255 aaPredicted RBP7.25□□□□□ -1.25
PRPF40A-207ENST00000471701 SMG9Q9H0W8 520 aaKnown RBP7.25□□□□□ -1.25
PRPF40A-207ENST00000471701 CXXC1Q9P0U4 656 aaPredicted RBP7.25□□□□□ -1.25
PRPF40A-207ENST00000471701 FNDC3AQ9Y2H6 1198 aaKnown RBP7.25□□□□□ -1.25
PRPF40A-207ENST00000471701 J3QW42 95 aa7.24□□□□□ -1.25
PRPF40A-207ENST00000471701 ADGRE1Q14246 886 aa7.24□□□□□ -1.25
PRPF40A-207ENST00000471701 TMEM164Q5U3C3 297 aa7.24□□□□□ -1.25
PRPF40A-207ENST00000471701 NLRP13Q86W25 1043 aa7.24□□□□□ -1.25
PRPF40A-207ENST00000471701 ETFBKMTQ8IXQ9 262 aa7.24□□□□□ -1.25
PRPF40A-207ENST00000471701 PBXIP1Q96AQ6 731 aa7.24□□□□□ -1.25
PRPF40A-207ENST00000471701 KCNMB2Q9Y691 235 aa7.24□□□□□ -1.25
PRPF40A-207ENST00000471701 MMP20O60882 483 aa7.23□□□□□ -1.25
PRPF40A-207ENST00000471701 MBTPS1Q14703 1052 aa7.23□□□□□ -1.25
PRPF40A-207ENST00000471701 RSPO4Q2I0M5 234 aaPredicted RBP7.23□□□□□ -1.25
PRPF40A-207ENST00000471701 NKAPLQ5M9Q1 402 aa7.23□□□□□ -1.25
PRPF40A-207ENST00000471701 SHISA2Q6UWI4 295 aa7.23□□□□□ -1.25
PRPF40A-207ENST00000471701 TXNRD3Q86VQ6 643 aa7.23□□□□□ -1.25
PRPF40A-207ENST00000471701 FBXO11Q86XK2 927 aa7.23□□□□□ -1.25
PRPF40A-207ENST00000471701 UBAP1LF5GYI3 381 aa7.22□□□□□ -1.25
PRPF40A-207ENST00000471701 GRIK5Q16478 980 aa7.22□□□□□ -1.25
PRPF40A-207ENST00000471701 ILDR2Q71H61 639 aa7.22□□□□□ -1.25
PRPF40A-207ENST00000471701 CLP1Q92989 425 aaKnown RBP7.22□□□□□ -1.25
PRPF40A-207ENST00000471701 PLD4Q96BZ4 506 aa7.22□□□□□ -1.25
PRPF40A-207ENST00000471701 STIM2Q9P246 746 aa7.22□□□□□ -1.25
PRPF40A-207ENST00000471701 GTF3C3Q9Y5Q9 886 aa7.22□□□□□ -1.25
PRPF40A-207ENST00000471701 TTC39BQ5VTQ0 682 aaPredicted RBP7.21□□□□□ -1.26
PRPF40A-207ENST00000471701 IGF2-ASQ6U949 168 aa7.21□□□□□ -1.26
PRPF40A-207ENST00000471701 CAPN12Q6ZSI9 719 aa7.21□□□□□ -1.26
PRPF40A-207ENST00000471701 SPACA7Q96KW9 195 aa7.21□□□□□ -1.26
PRPF40A-207ENST00000471701 NSUN5Q96P11 429 aaKnown RBP7.21□□□□□ -1.26
PRPF40A-207ENST00000471701 DYRK3O43781 588 aa7.2□□□□□ -1.26
PRPF40A-207ENST00000471701 SOX18P35713 384 aa7.2□□□□□ -1.26
PRPF40A-207ENST00000471701 ZAP70P43403 619 aa7.2□□□□□ -1.26
PRPF40A-207ENST00000471701 ZMYM1Q5SVZ6 1142 aa7.2□□□□□ -1.26
PRPF40A-207ENST00000471701 GDF6Q6KF10 455 aaPredicted RBP7.2□□□□□ -1.26
PRPF40A-207ENST00000471701 Q8N3U1 123 aa7.2□□□□□ -1.26
PRPF40A-207ENST00000471701 ABTB2Q8N961 1025 aa7.2□□□□□ -1.26
PRPF40A-207ENST00000471701 TP53INP1Q96A56 240 aa7.2□□□□□ -1.26
PRPF40A-207ENST00000471701 H2AFB1P0C5Y9 115 aa7.19□□□□□ -1.26
PRPF40A-207ENST00000471701 H2AFB2P0C5Z0 115 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms