RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 C7orf69Q9H7B7 122 aa3.16□□□□□ -1.9
UBXN4-207ENST00000471246 ZNF358Q9NW07 568 aa3.16□□□□□ -1.9
UBXN4-207ENST00000471246 CCDC39Q9UFE4 941 aa3.16□□□□□ -1.9
UBXN4-207ENST00000471246 SERTAD1Q9UHV2 236 aa3.16□□□□□ -1.9
UBXN4-207ENST00000471246 KIAA1024Q9UPX6 916 aa3.16□□□□□ -1.9
UBXN4-207ENST00000471246 USP3Q9Y6I4 520 aa3.16□□□□□ -1.9
UBXN4-207ENST00000471246 HMX2A2RU54 273 aa3.15□□□□□ -1.91
UBXN4-207ENST00000471246 CFPP27918 469 aa3.15□□□□□ -1.91
UBXN4-207ENST00000471246 SMTNP53814 917 aa3.15□□□□□ -1.91
UBXN4-207ENST00000471246 PLAURQ03405 335 aa3.15□□□□□ -1.91
UBXN4-207ENST00000471246 MTFR1Q15390 333 aa3.15□□□□□ -1.91
UBXN4-207ENST00000471246 TRIM50Q86XT4 487 aa3.15□□□□□ -1.91
UBXN4-207ENST00000471246 TPCN2Q8NHX9 752 aa3.15□□□□□ -1.91
UBXN4-207ENST00000471246 MRPL18Q9H0U6 180 aaKnown RBP3.15□□□□□ -1.91
UBXN4-207ENST00000471246 IGFLR1Q9H665 355 aa3.15□□□□□ -1.91
UBXN4-207ENST00000471246 ANGEL1Q9UNK9 670 aaKnown RBP3.15□□□□□ -1.91
UBXN4-207ENST00000471246 IQSEC3Q9UPP2 1182 aaPredicted RBP3.15□□□□□ -1.91
UBXN4-207ENST00000471246 A6NJY4 79 aa3.14□□□□□ -1.91
UBXN4-207ENST00000471246 BACH1O14867 736 aa3.14□□□□□ -1.91
UBXN4-207ENST00000471246 DHX15O43143 795 aaKnown RBP3.14□□□□□ -1.91
UBXN4-207ENST00000471246 GLB1P16278 677 aa3.14□□□□□ -1.91
UBXN4-207ENST00000471246 TXLNAP40222 546 aa3.14□□□□□ -1.91
UBXN4-207ENST00000471246 ATP1A2P50993 1020 aa3.14□□□□□ -1.91
UBXN4-207ENST00000471246 EPHA4P54764 986 aa3.14□□□□□ -1.91
UBXN4-207ENST00000471246 CLDN10P78369 228 aa3.14□□□□□ -1.91
UBXN4-207ENST00000471246 KSR1Q8IVT5 923 aa3.14□□□□□ -1.91
UBXN4-207ENST00000471246 TP53INP2Q8IXH6 220 aa3.14□□□□□ -1.91
UBXN4-207ENST00000471246 OGFOD1Q8N543 542 aa3.14□□□□□ -1.91
UBXN4-207ENST00000471246 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.14□□□□□ -1.91
UBXN4-207ENST00000471246 BHMTQ93088 406 aa3.14□□□□□ -1.91
UBXN4-207ENST00000471246 ZNF594Q96JF6 807 aaPredicted RBP3.14□□□□□ -1.91
UBXN4-207ENST00000471246 CALR3Q96L12 384 aaKnown RBP3.14□□□□□ -1.91
UBXN4-207ENST00000471246 SLC4A9Q96Q91 983 aa3.14□□□□□ -1.91
UBXN4-207ENST00000471246 LMCD1Q9NZU5 365 aa3.14□□□□□ -1.91
UBXN4-207ENST00000471246 SCHIP1Q9P0W5 487 aaPredicted RBP3.14□□□□□ -1.91
UBXN4-207ENST00000471246 MAFBQ9Y5Q3 323 aaPredicted RBP3.14□□□□□ -1.91
UBXN4-207ENST00000471246 PALM3A6NDB9 673 aaPredicted RBP3.13□□□□□ -1.91
UBXN4-207ENST00000471246 MSMPQ1L6U9 139 aa3.13□□□□□ -1.91
UBXN4-207ENST00000471246 CCDC102BQ68D86 513 aa3.13□□□□□ -1.91
UBXN4-207ENST00000471246 WFDC8Q8IUA0 241 aa3.13□□□□□ -1.91
UBXN4-207ENST00000471246 SIX5Q8N196 739 aa3.13□□□□□ -1.91
UBXN4-207ENST00000471246 C7orf43Q8WVR3 580 aa3.13□□□□□ -1.91
UBXN4-207ENST00000471246 FBXL18Q96ME1 805 aa3.13□□□□□ -1.91
UBXN4-207ENST00000471246 DNAJB12Q9NXW2 375 aaKnown RBP3.13□□□□□ -1.91
UBXN4-207ENST00000471246 CABP1Q9NZU7 370 aa3.13□□□□□ -1.91
UBXN4-207ENST00000471246 TFIP11Q9UBB9 837 aaKnown RBP3.13□□□□□ -1.91
UBXN4-207ENST00000471246 MKRN1Q9UHC7 482 aaKnown RBP3.13□□□□□ -1.91
UBXN4-207ENST00000471246 RAPGEFL1Q9UHV5 662 aa3.13□□□□□ -1.91
UBXN4-207ENST00000471246 PARP3Q9Y6F1 533 aa3.13□□□□□ -1.91
UBXN4-207ENST00000471246 CDK2AP1O14519 115 aa3.12□□□□□ -1.91
UBXN4-207ENST00000471246 ZBTB7BO15156 539 aaPredicted RBP3.12□□□□□ -1.91
UBXN4-207ENST00000471246 PRNPP04156 253 aa3.12□□□□□ -1.91
UBXN4-207ENST00000471246 GRNP28799 593 aaKnown RBP3.12□□□□□ -1.91
UBXN4-207ENST00000471246 TBCELQ5QJ74 424 aa3.12□□□□□ -1.91
UBXN4-207ENST00000471246 SLC9A9Q8IVB4 645 aa3.12□□□□□ -1.91
UBXN4-207ENST00000471246 TNS4Q8IZW8 715 aa3.12□□□□□ -1.91
UBXN4-207ENST00000471246 LARGE2Q8N3Y3 721 aa3.12□□□□□ -1.91
UBXN4-207ENST00000471246 ZDHHC1Q8WTX9 485 aa3.12□□□□□ -1.91
UBXN4-207ENST00000471246 LPIN3Q9BQK8 851 aa3.12□□□□□ -1.91
UBXN4-207ENST00000471246 PPP1R12CQ9BZL4 782 aa3.12□□□□□ -1.91
UBXN4-207ENST00000471246 SFI1A8K8P3 1242 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 USP17L15C9J2P7 530 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 USP17L10C9JJH3 530 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 USP17L13C9JLJ4 530 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 USP17L12C9JPN9 530 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 USP17L11C9JVI0 530 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 USP17L21D6R901 530 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 USP17L18D6R9N7 530 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 USP17L22D6RA61 530 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 USP17L17D6RBQ6 530 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 USP17L19D6RCP7 530 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 USP17L20D6RJB6 530 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 DKK1O94907 266 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 RASA1P20936 1047 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 KCNQ4P56696 695 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 MESP2Q0VG99 397 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 USP17L24Q0WX57 530 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 ECM1Q16610 540 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 CRTC2Q53ET0 693 aaPredicted RBP3.11□□□□□ -1.91
UBXN4-207ENST00000471246 SH3PXD2AQ5TCZ1 1133 aa3.11□□□□□ -1.91
UBXN4-207ENST00000471246 TSEN2Q8NCE0 465 aaKnown RBP3.11□□□□□ -1.91
UBXN4-207ENST00000471246 TSPAN10Q9H1Z9 355 aaPredicted RBP3.11□□□□□ -1.91
UBXN4-207ENST00000471246 ZNF777Q9ULD5 760 aaPredicted RBP3.11□□□□□ -1.91
UBXN4-207ENST00000471246 RBM19Q9Y4C8 960 aaKnown RBP3.11□□□□□ -1.91
UBXN4-207ENST00000471246 SERTM1A2A2V5 107 aa3.1□□□□□ -1.91
UBXN4-207ENST00000471246 FAM196BA6NMK8 535 aa3.1□□□□□ -1.91
UBXN4-207ENST00000471246 WDR64B1ANS9 1081 aa3.1□□□□□ -1.91
UBXN4-207ENST00000471246 M0R2N6 131 aa3.1□□□□□ -1.91
UBXN4-207ENST00000471246 EML1O00423 815 aa3.1□□□□□ -1.91
UBXN4-207ENST00000471246 LMOD1P29536 600 aaPredicted RBP3.1□□□□□ -1.91
UBXN4-207ENST00000471246 PSMA6P60900 246 aaKnown RBP3.1□□□□□ -1.91
UBXN4-207ENST00000471246 PTK7Q13308 1070 aa3.1□□□□□ -1.91
UBXN4-207ENST00000471246 TEAD4Q15561 434 aa3.1□□□□□ -1.91
UBXN4-207ENST00000471246 CFAP70Q5T0N1 1121 aa3.1□□□□□ -1.91
UBXN4-207ENST00000471246 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.1□□□□□ -1.91
UBXN4-207ENST00000471246 VSIG10LQ86VR7 867 aa3.1□□□□□ -1.91
UBXN4-207ENST00000471246 SIAH1Q8IUQ4 282 aa3.1□□□□□ -1.91
UBXN4-207ENST00000471246 L3MBTL2Q969R5 705 aa3.1□□□□□ -1.91
UBXN4-207ENST00000471246 TOX2Q96NM4 488 aa3.1□□□□□ -1.91
UBXN4-207ENST00000471246 SLC38A3Q99624 504 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms