RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 OPLAHO14841 1288 aa9.01□□□□□ -0.97
CKS1B-204ENST00000471245 IDH3AP50213 366 aa9.01□□□□□ -0.97
CKS1B-204ENST00000471245 XPCQ01831 940 aaPredicted RBP9.01□□□□□ -0.97
CKS1B-204ENST00000471245 FOXR1Q6PIV2 292 aa9.01□□□□□ -0.97
CKS1B-204ENST00000471245 FIGNL1Q6PIW4 674 aa9.01□□□□□ -0.97
CKS1B-204ENST00000471245 TMC4Q7Z404 712 aa9.01□□□□□ -0.97
CKS1B-204ENST00000471245 ZNF280CQ8ND82 737 aa9.01□□□□□ -0.97
CKS1B-204ENST00000471245 HSH2DQ96JZ2 352 aa9.01□□□□□ -0.97
CKS1B-204ENST00000471245 NUCKS1Q9H1E3 243 aaKnown RBP9.01□□□□□ -0.97
CKS1B-204ENST00000471245 CUEDC1Q9NWM3 386 aaPredicted RBP9.01□□□□□ -0.97
CKS1B-204ENST00000471245 TOPBP1Q92547 1522 aa9□□□□□ -0.97
CKS1B-204ENST00000471245 PNMA6FA0A0J9YX94 578 aa9□□□□□ -0.97
CKS1B-204ENST00000471245 A0A1W2PNR3 127 aa9□□□□□ -0.97
CKS1B-204ENST00000471245 WIPF1O43516 503 aa9□□□□□ -0.97
CKS1B-204ENST00000471245 INPP5BP32019 993 aa9□□□□□ -0.97
CKS1B-204ENST00000471245 DAB2P98082 770 aa9□□□□□ -0.97
CKS1B-204ENST00000471245 ARSJQ5FYB0 599 aaPredicted RBP9□□□□□ -0.97
CKS1B-204ENST00000471245 SAMD5Q5TGI4 173 aa9□□□□□ -0.97
CKS1B-204ENST00000471245 BTLAQ7Z6A9 289 aa9□□□□□ -0.97
CKS1B-204ENST00000471245 VWA5B2Q8N398 1253 aa9□□□□□ -0.97
CKS1B-204ENST00000471245 KLRG1Q96E93 195 aa9□□□□□ -0.97
CKS1B-204ENST00000471245 ZNF837Q96EG3 531 aaPredicted RBP9□□□□□ -0.97
CKS1B-204ENST00000471245 CSRNP1Q96S65 589 aa9□□□□□ -0.97
CKS1B-204ENST00000471245 DUSP9Q99956 384 aaKnown RBP9□□□□□ -0.97
CKS1B-204ENST00000471245 CFHR5Q9BXR6 569 aa9□□□□□ -0.97
CKS1B-204ENST00000471245 DNAJC25Q9H1X3 360 aa9□□□□□ -0.97
CKS1B-204ENST00000471245 GGNBP2Q9H3C7 697 aa9□□□□□ -0.97
CKS1B-204ENST00000471245 GPAMQ9HCL2 828 aa9□□□□□ -0.97
CKS1B-204ENST00000471245 PARP2Q9UGN5 583 aa9□□□□□ -0.97
CKS1B-204ENST00000471245 TARBP1Q13395 1621 aaKnown RBP9□□□□□ -0.97
CKS1B-204ENST00000471245 RSF1Q96T23 1441 aaPredicted RBP8.99□□□□□ -0.97
CKS1B-204ENST00000471245 UBAP2LQ14157 1087 aaKnown RBP8.99□□□□□ -0.97
CKS1B-204ENST00000471245 C8orf34Q49A92 452 aa8.99□□□□□ -0.97
CKS1B-204ENST00000471245 XKR5Q6UX68 686 aa8.99□□□□□ -0.97
CKS1B-204ENST00000471245 RUBCNLQ9H714 662 aa8.99□□□□□ -0.97
CKS1B-204ENST00000471245 NEUROD4Q9HD90 331 aa8.99□□□□□ -0.97
CKS1B-204ENST00000471245 THBS1P07996 1170 aa8.98□□□□□ -0.97
CKS1B-204ENST00000471245 TSNAXIP1Q2TAA8 658 aa8.98□□□□□ -0.97
CKS1B-204ENST00000471245 MRS2Q9HD23 443 aa8.98□□□□□ -0.97
CKS1B-204ENST00000471245 FNDC3AQ9Y2H6 1198 aaKnown RBP8.98□□□□□ -0.97
CKS1B-204ENST00000471245 PCDHGC4Q9Y5F7 938 aa8.98□□□□□ -0.97
CKS1B-204ENST00000471245 EIF1AYO14602 144 aaKnown RBP8.97□□□□□ -0.97
CKS1B-204ENST00000471245 EPB42P16452 691 aa8.97□□□□□ -0.97
CKS1B-204ENST00000471245 VEGFBP49765 207 aa8.97□□□□□ -0.97
CKS1B-204ENST00000471245 TYRO3Q06418 890 aa8.97□□□□□ -0.97
CKS1B-204ENST00000471245 PDE12Q6L8Q7 609 aaKnown RBP8.97□□□□□ -0.97
CKS1B-204ENST00000471245 LRRC69Q6ZNQ3 347 aa8.97□□□□□ -0.97
CKS1B-204ENST00000471245 FRMD6Q96NE9 622 aa8.97□□□□□ -0.97
CKS1B-204ENST00000471245 ZCCHC2Q9C0B9 1178 aaKnown RBP8.97□□□□□ -0.97
CKS1B-204ENST00000471245 C11orf16Q9NQ32 467 aa8.97□□□□□ -0.97
CKS1B-204ENST00000471245 NDFIP2Q9NV92 336 aa8.97□□□□□ -0.97
CKS1B-204ENST00000471245 WWC3Q9ULE0 1092 aa8.97□□□□□ -0.97
CKS1B-204ENST00000471245 PHF24Q9UPV7 400 aa8.97□□□□□ -0.97
CKS1B-204ENST00000471245 DNMBPQ6XZF7 1577 aa8.96□□□□□ -0.97
CKS1B-204ENST00000471245 SORBS3O60504 671 aa8.96□□□□□ -0.98
CKS1B-204ENST00000471245 GNA15P30679 374 aa8.96□□□□□ -0.98
CKS1B-204ENST00000471245 PSMD2Q13200 908 aa8.96□□□□□ -0.98
CKS1B-204ENST00000471245 ORC1Q13415 861 aa8.96□□□□□ -0.98
CKS1B-204ENST00000471245 TRERF1Q96PN7 1200 aa8.96□□□□□ -0.98
CKS1B-204ENST00000471245 BACH2Q9BYV9 841 aa8.96□□□□□ -0.98
CKS1B-204ENST00000471245 RTCBQ9Y3I0 505 aaKnown RBP8.96□□□□□ -0.98
CKS1B-204ENST00000471245 AQRO60306 1485 aaKnown RBP eCLIP8.96□□□□□ -0.98
CKS1B-204ENST00000471245 CDC14CA4D256 554 aa8.95□□□□□ -0.98
CKS1B-204ENST00000471245 SCAMP3O14828 347 aaKnown RBP8.95□□□□□ -0.98
CKS1B-204ENST00000471245 CPNE3O75131 537 aaKnown RBP8.95□□□□□ -0.98
CKS1B-204ENST00000471245 FAM157BP0CG42 384 aa8.95□□□□□ -0.98
CKS1B-204ENST00000471245 LAMC2Q13753 1193 aa8.95□□□□□ -0.98
CKS1B-204ENST00000471245 TRIP4Q15650 581 aaPredicted RBP8.95□□□□□ -0.98
CKS1B-204ENST00000471245 GPR161Q8N6U8 529 aaKnown RBP8.95□□□□□ -0.98
CKS1B-204ENST00000471245 SNX29Q8TEQ0 813 aa8.95□□□□□ -0.98
CKS1B-204ENST00000471245 GTPBP3Q969Y2 492 aaKnown RBP8.95□□□□□ -0.98
CKS1B-204ENST00000471245 SETDB2Q96T68 719 aa8.95□□□□□ -0.98
CKS1B-204ENST00000471245 ATXN7L1Q9ULK2 861 aaPredicted RBP8.95□□□□□ -0.98
CKS1B-204ENST00000471245 KCNMB2Q9Y691 235 aa8.95□□□□□ -0.98
CKS1B-204ENST00000471245 GJA3Q9Y6H8 435 aa8.95□□□□□ -0.98
CKS1B-204ENST00000471245 ERBB4Q15303 1308 aa8.95□□□□□ -0.98
CKS1B-204ENST00000471245 CLASP1Q7Z460 1538 aa8.95□□□□□ -0.98
CKS1B-204ENST00000471245 ABCC8Q09428 1581 aa8.95□□□□□ -0.98
CKS1B-204ENST00000471245 A6NHS1 94 aa8.94□□□□□ -0.98
CKS1B-204ENST00000471245 TNFRSF21O75509 655 aa8.94□□□□□ -0.98
CKS1B-204ENST00000471245 FAM161BQ96MY7 647 aa8.94□□□□□ -0.98
CKS1B-204ENST00000471245 UBAP1LF5GYI3 381 aa8.93□□□□□ -0.98
CKS1B-204ENST00000471245 ATXN7O15265 892 aaPredicted RBP8.93□□□□□ -0.98
CKS1B-204ENST00000471245 LDLRAD1Q5T700 205 aa8.93□□□□□ -0.98
CKS1B-204ENST00000471245 ZNF438Q7Z4V0 828 aa8.93□□□□□ -0.98
CKS1B-204ENST00000471245 C8orf37Q96NL8 207 aa8.93□□□□□ -0.98
CKS1B-204ENST00000471245 EFSO43281 561 aa8.92□□□□□ -0.98
CKS1B-204ENST00000471245 BNIP3LO60238 219 aa8.92□□□□□ -0.98
CKS1B-204ENST00000471245 EGFRP00533 1210 aa8.92□□□□□ -0.98
CKS1B-204ENST00000471245 GRNP28799 593 aaKnown RBP8.92□□□□□ -0.98
CKS1B-204ENST00000471245 KCNQ4P56696 695 aa8.92□□□□□ -0.98
CKS1B-204ENST00000471245 TNP2Q05952 138 aa8.92□□□□□ -0.98
CKS1B-204ENST00000471245 FAM182BQ5T319 152 aa8.92□□□□□ -0.98
CKS1B-204ENST00000471245 CMTR1Q8N1G2 835 aaKnown RBP8.92□□□□□ -0.98
CKS1B-204ENST00000471245 CEP63Q96MT8 703 aa8.92□□□□□ -0.98
CKS1B-204ENST00000471245 RNF19AQ9NV58 838 aa8.92□□□□□ -0.98
CKS1B-204ENST00000471245 VTI1BQ9UEU0 232 aa8.92□□□□□ -0.98
CKS1B-204ENST00000471245 SPG7Q9UQ90 795 aa8.92□□□□□ -0.98
CKS1B-204ENST00000471245 LCE2CQ5TA81 110 aa8.91□□□□□ -0.98
CKS1B-204ENST00000471245 ELP3Q9H9T3 547 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms