RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 EIF4A1P60842 406 aaKnown RBP25.1■■□□□ 1.61
NCKIPSD-209ENST00000470006 USP48Q86UV5 1035 aa25.1■■□□□ 1.61
NCKIPSD-209ENST00000470006 TRPM4Q8TD43 1214 aa25.1■■□□□ 1.61
NCKIPSD-209ENST00000470006 UTP14AQ9BVJ6 771 aaKnown RBP25.1■■□□□ 1.61
NCKIPSD-209ENST00000470006 CNOT7Q9UIV1 285 aaKnown RBP25.1■■□□□ 1.61
NCKIPSD-209ENST00000470006 ZIC5Q96T25 663 aa25.09■■□□□ 1.61
NCKIPSD-209ENST00000470006 RTFDC1Q9BY42 306 aaPredicted RBP25.09■■□□□ 1.61
NCKIPSD-209ENST00000470006 PDE4DIPQ5VU43 2346 aa25.09■■□□□ 1.61
NCKIPSD-209ENST00000470006 TNRC18O15417 2968 aaPredicted RBP25.09■■□□□ 1.61
NCKIPSD-209ENST00000470006 CDHR2Q9BYE9 1310 aa25.09■■□□□ 1.61
NCKIPSD-209ENST00000470006 BBOX1O75936 387 aa25.08■■□□□ 1.61
NCKIPSD-209ENST00000470006 PPP2R1AP30153 589 aa25.08■■□□□ 1.61
NCKIPSD-209ENST00000470006 SP8Q8IXZ3 490 aa25.08■■□□□ 1.61
NCKIPSD-209ENST00000470006 KIAA2012Q0VF49 1180 aa25.07■■□□□ 1.6
NCKIPSD-209ENST00000470006 KDM3BQ7LBC6 1761 aa25.07■■□□□ 1.6
NCKIPSD-209ENST00000470006 THUMPD2Q9BTF0 503 aaKnown RBP25.06■■□□□ 1.6
NCKIPSD-209ENST00000470006 SHTN1A0MZ66 631 aa25.05■■□□□ 1.6
NCKIPSD-209ENST00000470006 SLC10A5Q5PT55 438 aa25.05■■□□□ 1.6
NCKIPSD-209ENST00000470006 DDX46Q7L014 1031 aaKnown RBP25.05■■□□□ 1.6
NCKIPSD-209ENST00000470006 MICALL2Q8IY33 904 aa25.05■■□□□ 1.6
NCKIPSD-209ENST00000470006 DLG5Q8TDM6 1919 aa25.05■■□□□ 1.6
NCKIPSD-209ENST00000470006 EIF2S2P20042 333 aaKnown RBP25.04■■□□□ 1.6
NCKIPSD-209ENST00000470006 SOX10P56693 466 aa25.04■■□□□ 1.6
NCKIPSD-209ENST00000470006 DLK2Q6UY11 383 aa25.04■■□□□ 1.6
NCKIPSD-209ENST00000470006 HCLS1P14317 486 aaPredicted RBP25.03■■□□□ 1.6
NCKIPSD-209ENST00000470006 RGMBQ6NW40 437 aa25.03■■□□□ 1.6
NCKIPSD-209ENST00000470006 C2orf69Q8N8R5 385 aa25.03■■□□□ 1.6
NCKIPSD-209ENST00000470006 SAMD7Q7Z3H4 446 aa25.02■■□□□ 1.6
NCKIPSD-209ENST00000470006 KRT26Q7Z3Y9 468 aa25.02■■□□□ 1.6
NCKIPSD-209ENST00000470006 ZBTB12Q9Y330 459 aaPredicted RBP25.02■■□□□ 1.6
NCKIPSD-209ENST00000470006 ERBB4Q15303 1308 aa25.02■■□□□ 1.6
NCKIPSD-209ENST00000470006 RBM26Q5T8P6 1007 aaKnown RBP25.01■■□□□ 1.59
NCKIPSD-209ENST00000470006 GBA2Q9HCG7 927 aaPredicted RBP25.01■■□□□ 1.59
NCKIPSD-209ENST00000470006 YDJCA8MPS7 323 aa25■■□□□ 1.59
NCKIPSD-209ENST00000470006 ZNF157P51786 506 aaPredicted RBP25■■□□□ 1.59
NCKIPSD-209ENST00000470006 KIF23Q02241 960 aaPredicted RBP25■■□□□ 1.59
NCKIPSD-209ENST00000470006 TBC1D10BQ4KMP7 808 aaPredicted RBP25■■□□□ 1.59
NCKIPSD-209ENST00000470006 CCDC102AQ96A19 550 aa25■■□□□ 1.59
NCKIPSD-209ENST00000470006 POLR2AP24928 1970 aaKnown RBP25■■□□□ 1.59
NCKIPSD-209ENST00000470006 TRPA1O75762 1119 aa24.99■■□□□ 1.59
NCKIPSD-209ENST00000470006 GRAPQ13588 217 aa24.99■■□□□ 1.59
NCKIPSD-209ENST00000470006 GRAPLQ8TC17 118 aaPredicted RBP24.99■■□□□ 1.59
NCKIPSD-209ENST00000470006 DCPSQ96C86 337 aaKnown RBP24.99■■□□□ 1.59
NCKIPSD-209ENST00000470006 TRMT112Q9UI30 125 aaKnown RBP24.99■■□□□ 1.59
NCKIPSD-209ENST00000470006 LAMB2P55268 1798 aa24.98■■□□□ 1.59
NCKIPSD-209ENST00000470006 ANXA1P04083 346 aa24.98■■□□□ 1.59
NCKIPSD-209ENST00000470006 AIMP1Q12904 312 aaKnown RBP24.98■■□□□ 1.59
NCKIPSD-209ENST00000470006 SAGE1Q9NXZ1 904 aa24.98■■□□□ 1.59
NCKIPSD-209ENST00000470006 TSPYL4Q9UJ04 414 aa24.98■■□□□ 1.59
NCKIPSD-209ENST00000470006 AKAP11Q9UKA4 1901 aa24.97■■□□□ 1.59
NCKIPSD-209ENST00000470006 FAM155AB1AL88 458 aaPredicted RBP24.97■■□□□ 1.59
NCKIPSD-209ENST00000470006 PSMD14O00487 310 aa24.97■■□□□ 1.59
NCKIPSD-209ENST00000470006 RIMBP2O15034 1052 aa24.97■■□□□ 1.59
NCKIPSD-209ENST00000470006 NFE2L2Q16236 605 aa24.97■■□□□ 1.59
NCKIPSD-209ENST00000470006 WASHC4Q2M389 1173 aa24.97■■□□□ 1.59
NCKIPSD-209ENST00000470006 HSP90AB3PQ58FF7 597 aa24.97■■□□□ 1.59
NCKIPSD-209ENST00000470006 DPF2Q92785 391 aa24.97■■□□□ 1.59
NCKIPSD-209ENST00000470006 DBNDD1Q9H9R9 158 aa24.97■■□□□ 1.59
NCKIPSD-209ENST00000470006 TAF1P21675 1872 aa24.97■■□□□ 1.59
NCKIPSD-209ENST00000470006 ANKRD36CQ5JPF3 1778 aa24.97■■□□□ 1.59
NCKIPSD-209ENST00000470006 ADM5C9JUS6 153 aa24.96■■□□□ 1.59
NCKIPSD-209ENST00000470006 NLRP10Q86W26 655 aa24.96■■□□□ 1.59
NCKIPSD-209ENST00000470006 ZNF428Q96B54 188 aa24.96■■□□□ 1.59
NCKIPSD-209ENST00000470006 RNF186Q9NXI6 227 aa24.96■■□□□ 1.59
NCKIPSD-209ENST00000470006 PROSER3Q2NL68 480 aa24.95■■□□□ 1.58
NCKIPSD-209ENST00000470006 TMC4Q7Z404 712 aa24.95■■□□□ 1.58
NCKIPSD-209ENST00000470006 NECTIN2Q92692 538 aa24.95■■□□□ 1.58
NCKIPSD-209ENST00000470006 NSFL1CQ9UNZ2 370 aaKnown RBP24.95■■□□□ 1.58
NCKIPSD-209ENST00000470006 SH3TC1Q8TE82 1336 aa24.94■■□□□ 1.58
NCKIPSD-209ENST00000470006 MAPK8IP3Q9UPT6 1336 aa24.94■■□□□ 1.58
NCKIPSD-209ENST00000470006 C6orf229H3BNL8 230 aa24.94■■□□□ 1.58
NCKIPSD-209ENST00000470006 PDIA6Q15084 440 aa24.94■■□□□ 1.58
NCKIPSD-209ENST00000470006 COPS6Q7L5N1 327 aa24.94■■□□□ 1.58
NCKIPSD-209ENST00000470006 EGFRP00533 1210 aa24.92■■□□□ 1.58
NCKIPSD-209ENST00000470006 LRP10Q7Z4F1 713 aa24.92■■□□□ 1.58
NCKIPSD-209ENST00000470006 SULF1Q8IWU6 871 aa24.92■■□□□ 1.58
NCKIPSD-209ENST00000470006 RPS12P25398 132 aaKnown RBP24.91■■□□□ 1.58
NCKIPSD-209ENST00000470006 DOK7Q18PE1 504 aa24.91■■□□□ 1.58
NCKIPSD-209ENST00000470006 XAGE3Q8WTP9 111 aa24.91■■□□□ 1.58
NCKIPSD-209ENST00000470006 TCIRG1Q13488 830 aa24.9■■□□□ 1.58
NCKIPSD-209ENST00000470006 CTU1Q7Z7A3 348 aaKnown RBP24.9■■□□□ 1.58
NCKIPSD-209ENST00000470006 PLEKHF1Q96S99 279 aa24.9■■□□□ 1.58
NCKIPSD-209ENST00000470006 PNNQ9H307 717 aaKnown RBP24.9■■□□□ 1.58
NCKIPSD-209ENST00000470006 ECE2O60344 883 aa24.89■■□□□ 1.58
NCKIPSD-209ENST00000470006 KIF4BQ2VIQ3 1234 aa24.89■■□□□ 1.58
NCKIPSD-209ENST00000470006 CSRNP1Q96S65 589 aa24.89■■□□□ 1.58
NCKIPSD-209ENST00000470006 EYA3Q99504 573 aa24.89■■□□□ 1.58
NCKIPSD-209ENST00000470006 KCNQ5Q9NR82 932 aa24.89■■□□□ 1.58
NCKIPSD-209ENST00000470006 DUOX1Q9NRD9 1551 aa24.88■■□□□ 1.57
NCKIPSD-209ENST00000470006 G3V3G9 751 aa24.88■■□□□ 1.57
NCKIPSD-209ENST00000470006 SLC10A3P09131 477 aa24.88■■□□□ 1.57
NCKIPSD-209ENST00000470006 DCAF8Q5TAQ9 597 aa24.88■■□□□ 1.57
NCKIPSD-209ENST00000470006 PRPF38BQ5VTL8 546 aaKnown RBP24.88■■□□□ 1.57
NCKIPSD-209ENST00000470006 GGA3Q9NZ52 723 aa24.87■■□□□ 1.57
NCKIPSD-209ENST00000470006 GPSM2P81274 684 aa24.86■■□□□ 1.57
NCKIPSD-209ENST00000470006 CELF1Q92879 486 aaKnown RBP24.86■■□□□ 1.57
NCKIPSD-209ENST00000470006 POLLQ9UGP5 575 aa24.86■■□□□ 1.57
NCKIPSD-209ENST00000470006 CDCA5Q96FF9 252 aa24.85■■□□□ 1.57
NCKIPSD-209ENST00000470006 HDAC9Q9UKV0 1011 aa24.85■■□□□ 1.57
NCKIPSD-209ENST00000470006 LRRC37AA6NMS7 1700 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms