RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 C8orf58Q8NAV2 365 aa17.22■□□□□ 0.35
CPSF4-210ENST00000469897 ARFGEF2Q9Y6D5 1785 aa17.22■□□□□ 0.35
CPSF4-210ENST00000469897 NUP98P52948 1817 aa17.21■□□□□ 0.35
CPSF4-210ENST00000469897 VEGFBP49765 207 aa17.21■□□□□ 0.35
CPSF4-210ENST00000469897 CALD1Q05682 793 aaKnown RBP17.21■□□□□ 0.35
CPSF4-210ENST00000469897 FMR1Q06787 632 aaKnown RBP eCLIP17.21■□□□□ 0.35
CPSF4-210ENST00000469897 TRIM28Q13263 835 aaKnown RBP17.21■□□□□ 0.35
CPSF4-210ENST00000469897 SF3B3Q15393 1217 aaKnown RBP17.21■□□□□ 0.35
CPSF4-210ENST00000469897 CCDC184Q52MB2 194 aa17.21■□□□□ 0.35
CPSF4-210ENST00000469897 CACNA1SQ13698 1873 aa17.2■□□□□ 0.34
CPSF4-210ENST00000469897 DICER1Q9UPY3 1922 aaKnown RBP17.2■□□□□ 0.34
CPSF4-210ENST00000469897 KIAA2012Q0VF49 1180 aa17.2■□□□□ 0.34
CPSF4-210ENST00000469897 USP50Q70EL3 339 aaPredicted RBP17.2■□□□□ 0.34
CPSF4-210ENST00000469897 CELF1Q92879 486 aaKnown RBP17.2■□□□□ 0.34
CPSF4-210ENST00000469897 NSFL1CQ9UNZ2 370 aaKnown RBP17.2■□□□□ 0.34
CPSF4-210ENST00000469897 CNTNAP1P78357 1384 aa17.19■□□□□ 0.34
CPSF4-210ENST00000469897 IRS4O14654 1257 aaPredicted RBP17.19■□□□□ 0.34
CPSF4-210ENST00000469897 RAD17O75943 681 aa17.19■□□□□ 0.34
CPSF4-210ENST00000469897 GOLGA2Q08379 1002 aa17.19■□□□□ 0.34
CPSF4-210ENST00000469897 DEFB115Q30KQ5 88 aa17.19■□□□□ 0.34
CPSF4-210ENST00000469897 MYD88Q99836 296 aa17.19■□□□□ 0.34
CPSF4-210ENST00000469897 GPRC5DQ9NZD1 345 aa17.19■□□□□ 0.34
CPSF4-210ENST00000469897 GMPSP49915 693 aaPredicted RBP17.18■□□□□ 0.34
CPSF4-210ENST00000469897 CIAPIN1Q6FI81 312 aa17.18■□□□□ 0.34
CPSF4-210ENST00000469897 TMC4Q7Z404 712 aa17.18■□□□□ 0.34
CPSF4-210ENST00000469897 TNS4Q8IZW8 715 aa17.18■□□□□ 0.34
CPSF4-210ENST00000469897 JARID2Q92833 1246 aaPredicted RBP17.18■□□□□ 0.34
CPSF4-210ENST00000469897 TRAF5O00463 557 aa17.17■□□□□ 0.34
CPSF4-210ENST00000469897 RIMBP2O15034 1052 aa17.17■□□□□ 0.34
CPSF4-210ENST00000469897 TNIP1Q15025 636 aa17.17■□□□□ 0.34
CPSF4-210ENST00000469897 WASHC4Q2M389 1173 aa17.17■□□□□ 0.34
CPSF4-210ENST00000469897 TSPYL6Q8N831 410 aa17.17■□□□□ 0.34
CPSF4-210ENST00000469897 BCL2L13Q9BXK5 485 aa17.17■□□□□ 0.34
CPSF4-210ENST00000469897 ADARB2Q9NS39 739 aaKnown RBP17.17■□□□□ 0.34
CPSF4-210ENST00000469897 ABT1Q9ULW3 272 aaKnown RBP17.17■□□□□ 0.34
CPSF4-210ENST00000469897 YDJCA8MPS7 323 aa17.16■□□□□ 0.34
CPSF4-210ENST00000469897 C6orf229H3BNL8 230 aa17.16■□□□□ 0.34
CPSF4-210ENST00000469897 RPS8P62241 208 aaKnown RBP17.16■□□□□ 0.34
CPSF4-210ENST00000469897 GPSM2P81274 684 aa17.16■□□□□ 0.34
CPSF4-210ENST00000469897 ZBTB38Q8NAP3 1195 aaPredicted RBP17.16■□□□□ 0.34
CPSF4-210ENST00000469897 RASSF10A6NK89 507 aa17.15■□□□□ 0.34
CPSF4-210ENST00000469897 CAPN15O75808 1086 aa17.15■□□□□ 0.34
CPSF4-210ENST00000469897 CCDC30Q5VVM6 783 aa17.15■□□□□ 0.34
CPSF4-210ENST00000469897 CST9Q5W186 159 aa17.15■□□□□ 0.34
CPSF4-210ENST00000469897 SEC31BQ9NQW1 1179 aa17.15■□□□□ 0.34
CPSF4-210ENST00000469897 POLLQ9UGP5 575 aa17.15■□□□□ 0.34
CPSF4-210ENST00000469897 FOXN1O15353 648 aa17.14■□□□□ 0.33
CPSF4-210ENST00000469897 HIRAP54198 1017 aaPredicted RBP17.14■□□□□ 0.33
CPSF4-210ENST00000469897 CCDC191Q8NCU4 936 aa17.14■□□□□ 0.33
CPSF4-210ENST00000469897 TSR2Q969E8 191 aaKnown RBP17.14■□□□□ 0.33
CPSF4-210ENST00000469897 CNOT7Q9UIV1 285 aaKnown RBP17.14■□□□□ 0.33
CPSF4-210ENST00000469897 ZBTB12Q9Y330 459 aaPredicted RBP17.14■□□□□ 0.33
CPSF4-210ENST00000469897 SCN4AP35499 1836 aa17.14■□□□□ 0.33
CPSF4-210ENST00000469897 SHTN1A0MZ66 631 aa17.13■□□□□ 0.33
CPSF4-210ENST00000469897 DDX58O95786 925 aaKnown RBP17.13■□□□□ 0.33
CPSF4-210ENST00000469897 DOK7Q18PE1 504 aa17.13■□□□□ 0.33
CPSF4-210ENST00000469897 GPR101Q96P66 508 aaPredicted RBP17.13■□□□□ 0.33
CPSF4-210ENST00000469897 CCDC85AQ96PX6 553 aaPredicted RBP17.13■□□□□ 0.33
CPSF4-210ENST00000469897 METTL22Q9BUU2 404 aaPredicted RBP17.13■□□□□ 0.33
CPSF4-210ENST00000469897 CHMP4AQ9BY43 222 aa17.13■□□□□ 0.33
CPSF4-210ENST00000469897 DBNDD1Q9H9R9 158 aa17.13■□□□□ 0.33
CPSF4-210ENST00000469897 KCNQ5Q9NR82 932 aa17.13■□□□□ 0.33
CPSF4-210ENST00000469897 WDR33Q9C0J8 1336 aaKnown RBP17.13■□□□□ 0.33
CPSF4-210ENST00000469897 H7C1D1 291 aa17.12■□□□□ 0.33
CPSF4-210ENST00000469897 PCCAP05165 728 aaPredicted RBP17.12■□□□□ 0.33
CPSF4-210ENST00000469897 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
CPSF4-210ENST00000469897 TBC1D16Q8TBP0 767 aa17.12■□□□□ 0.33
CPSF4-210ENST00000469897 CWC25Q9NXE8 425 aaPredicted RBP17.12■□□□□ 0.33
CPSF4-210ENST00000469897 PGAP2Q9UHJ9 254 aa17.12■□□□□ 0.33
CPSF4-210ENST00000469897 MAP3K2Q9Y2U5 619 aa17.12■□□□□ 0.33
CPSF4-210ENST00000469897 PI4KAP2A4QPH2 592 aa17.11■□□□□ 0.33
CPSF4-210ENST00000469897 PDE8AO60658 829 aa17.11■□□□□ 0.33
CPSF4-210ENST00000469897 HSP90B1P14625 803 aaKnown RBP17.11■□□□□ 0.33
CPSF4-210ENST00000469897 GRM1Q13255 1194 aa17.11■□□□□ 0.33
CPSF4-210ENST00000469897 KSR2Q6VAB6 950 aa17.11■□□□□ 0.33
CPSF4-210ENST00000469897 PAXIP1Q6ZW49 1069 aaPredicted RBP17.11■□□□□ 0.33
CPSF4-210ENST00000469897 PI4KAP1Q8N8J0 262 aa17.11■□□□□ 0.33
CPSF4-210ENST00000469897 AIDAQ96BJ3 306 aa17.11■□□□□ 0.33
CPSF4-210ENST00000469897 EYA3Q99504 573 aa17.11■□□□□ 0.33
CPSF4-210ENST00000469897 GLIS2Q9BZE0 524 aaPredicted RBP17.11■□□□□ 0.33
CPSF4-210ENST00000469897 WBP1LQ9NX94 342 aa17.11■□□□□ 0.33
CPSF4-210ENST00000469897 PSMD14O00487 310 aa17.1■□□□□ 0.33
CPSF4-210ENST00000469897 CCDC27Q2M243 656 aa17.1■□□□□ 0.33
CPSF4-210ENST00000469897 CCDC152Q4G0S7 254 aa17.1■□□□□ 0.33
CPSF4-210ENST00000469897 MICALL2Q8IY33 904 aa17.1■□□□□ 0.33
CPSF4-210ENST00000469897 TRPM4Q8TD43 1214 aa17.1■□□□□ 0.33
CPSF4-210ENST00000469897 ZC3H12CQ9C0D7 883 aaKnown RBP17.1■□□□□ 0.33
CPSF4-210ENST00000469897 LTBP1Q14766 1721 aa17.1■□□□□ 0.33
CPSF4-210ENST00000469897 SLC4A2P04920 1241 aa17.09■□□□□ 0.33
CPSF4-210ENST00000469897 IGKV5-2P06315 115 aa17.09■□□□□ 0.33
CPSF4-210ENST00000469897 CTCFP49711 727 aaPredicted RBP17.09■□□□□ 0.33
CPSF4-210ENST00000469897 CYP4F22Q6NT55 531 aa17.09■□□□□ 0.33
CPSF4-210ENST00000469897 ZC3H15Q8WU90 426 aaKnown RBP17.09■□□□□ 0.33
CPSF4-210ENST00000469897 STK31Q9BXU1 1019 aa17.09■□□□□ 0.33
CPSF4-210ENST00000469897 ANKIB1Q9P2G1 1089 aa17.09■□□□□ 0.33
CPSF4-210ENST00000469897 SALL2Q9Y467 1007 aaPredicted RBP17.09■□□□□ 0.33
CPSF4-210ENST00000469897 ADAMTSL1Q8N6G6 1762 aa17.09■□□□□ 0.33
CPSF4-210ENST00000469897 PCNTO95613 3336 aa17.09■□□□□ 0.33
CPSF4-210ENST00000469897 ECE2O60344 883 aa17.08■□□□□ 0.32
CPSF4-210ENST00000469897 CELF2O95319 508 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms