RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 KIF20AO95235 890 aa17.5■□□□□ 0.39
LIMS2-213ENST00000469300 RBM10P98175 930 aaKnown RBP17.5■□□□□ 0.39
LIMS2-213ENST00000469300 TTLL12Q14166 644 aaPredicted RBP17.5■□□□□ 0.39
LIMS2-213ENST00000469300 ZBTB40Q9NUA8 1239 aa17.5■□□□□ 0.39
LIMS2-213ENST00000469300 ERVV-2B6SEH9 535 aa17.5■□□□□ 0.39
LIMS2-213ENST00000469300 CTAGE5O15320 804 aa17.5■□□□□ 0.39
LIMS2-213ENST00000469300 PPP1R12BO60237 982 aaPredicted RBP17.5■□□□□ 0.39
LIMS2-213ENST00000469300 MPNDQ8N594 471 aa17.49■□□□□ 0.39
LIMS2-213ENST00000469300 METTL22Q9BUU2 404 aaPredicted RBP17.49■□□□□ 0.39
LIMS2-213ENST00000469300 CCNL1Q9UK58 526 aaPredicted RBP17.49■□□□□ 0.39
LIMS2-213ENST00000469300 NPHP4O75161 1426 aaPredicted RBP17.49■□□□□ 0.39
LIMS2-213ENST00000469300 MYOM2P54296 1465 aa17.49■□□□□ 0.39
LIMS2-213ENST00000469300 TANGO6Q9C0B7 1094 aa17.49■□□□□ 0.39
LIMS2-213ENST00000469300 CHD1O14646 1710 aa17.49■□□□□ 0.39
LIMS2-213ENST00000469300 GNPATO15228 680 aa17.49■□□□□ 0.39
LIMS2-213ENST00000469300 CWF19L2Q2TBE0 894 aaKnown RBP17.49■□□□□ 0.39
LIMS2-213ENST00000469300 TAF3Q5VWG9 929 aa17.49■□□□□ 0.39
LIMS2-213ENST00000469300 METAP2P50579 478 aaKnown RBP eCLIP17.48■□□□□ 0.39
LIMS2-213ENST00000469300 KAT6BQ8WYB5 2073 aa17.48■□□□□ 0.39
LIMS2-213ENST00000469300 HECW2Q9P2P5 1572 aa17.48■□□□□ 0.39
LIMS2-213ENST00000469300 PREX2Q70Z35 1606 aa17.48■□□□□ 0.39
LIMS2-213ENST00000469300 BAG4O95429 457 aaKnown RBP17.48■□□□□ 0.39
LIMS2-213ENST00000469300 SLC9C2Q5TAH2 1124 aa17.48■□□□□ 0.39
LIMS2-213ENST00000469300 PAG1Q9NWQ8 432 aa17.48■□□□□ 0.39
LIMS2-213ENST00000469300 ORC3Q9UBD5 711 aaPredicted RBP17.48■□□□□ 0.39
LIMS2-213ENST00000469300 ZCCHC11Q5TAX3 1644 aaKnown RBP17.48■□□□□ 0.39
LIMS2-213ENST00000469300 ARAP3Q8WWN8 1544 aa17.48■□□□□ 0.39
LIMS2-213ENST00000469300 SMC5Q8IY18 1101 aa17.47■□□□□ 0.39
LIMS2-213ENST00000469300 ESYT1Q9BSJ8 1104 aa17.47■□□□□ 0.39
LIMS2-213ENST00000469300 STK32BQ9NY57 414 aa17.47■□□□□ 0.39
LIMS2-213ENST00000469300 WTAPQ15007 396 aa17.47■□□□□ 0.39
LIMS2-213ENST00000469300 TBC1D32Q96NH3 1257 aa17.47■□□□□ 0.39
LIMS2-213ENST00000469300 RAD50Q92878 1312 aa17.47■□□□□ 0.39
LIMS2-213ENST00000469300 RUFY1Q96T51 708 aa17.47■□□□□ 0.39
LIMS2-213ENST00000469300 KRT24Q2M2I5 525 aa17.46■□□□□ 0.39
LIMS2-213ENST00000469300 RBM27Q9P2N5 1060 aaKnown RBP17.46■□□□□ 0.39
LIMS2-213ENST00000469300 SLC4A4Q9Y6R1 1079 aa17.46■□□□□ 0.39
LIMS2-213ENST00000469300 TMEM94Q12767 1356 aa17.46■□□□□ 0.39
LIMS2-213ENST00000469300 PPP4R3AQ6IN85 833 aa17.46■□□□□ 0.39
LIMS2-213ENST00000469300 CAGE1Q8TC20 777 aa17.46■□□□□ 0.39
LIMS2-213ENST00000469300 DEF6Q9H4E7 631 aa17.46■□□□□ 0.39
LIMS2-213ENST00000469300 ANO10Q9NW15 660 aa17.46■□□□□ 0.39
LIMS2-213ENST00000469300 UGGT1Q9NYU2 1555 aa17.46■□□□□ 0.39
LIMS2-213ENST00000469300 HAND2P61296 217 aa17.46■□□□□ 0.39
LIMS2-213ENST00000469300 TTC37Q6PGP7 1564 aa17.46■□□□□ 0.39
LIMS2-213ENST00000469300 BMP15O95972 392 aa17.46■□□□□ 0.39
LIMS2-213ENST00000469300 CNBD1Q8NA66 436 aa17.46■□□□□ 0.39
LIMS2-213ENST00000469300 NSFL1CQ9UNZ2 370 aaKnown RBP17.46■□□□□ 0.39
LIMS2-213ENST00000469300 CCDC82Q8N4S0 544 aa17.45■□□□□ 0.38
LIMS2-213ENST00000469300 RBM17Q96I25 401 aaKnown RBP17.45■□□□□ 0.38
LIMS2-213ENST00000469300 KIAA0232Q92628 1395 aa17.45■□□□□ 0.38
LIMS2-213ENST00000469300 FGFR1OPO95684 399 aaKnown RBP17.45■□□□□ 0.38
LIMS2-213ENST00000469300 NBPF7P0C2Y1 421 aaPredicted RBP17.45■□□□□ 0.38
LIMS2-213ENST00000469300 CCDC87Q9NVE4 849 aa17.45■□□□□ 0.38
LIMS2-213ENST00000469300 CCT2P78371 535 aaKnown RBP17.45■□□□□ 0.38
LIMS2-213ENST00000469300 JDP2Q8WYK2 163 aa17.45■□□□□ 0.38
LIMS2-213ENST00000469300 TBC1D2Q9BYX2 928 aa17.45■□□□□ 0.38
LIMS2-213ENST00000469300 ZSCAN16Q9H4T2 348 aaPredicted RBP17.45■□□□□ 0.38
LIMS2-213ENST00000469300 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.45■□□□□ 0.38
LIMS2-213ENST00000469300 MICU3Q86XE3 530 aa17.45■□□□□ 0.38
LIMS2-213ENST00000469300 RBM8AQ9Y5S9 174 aaKnown RBP17.45■□□□□ 0.38
LIMS2-213ENST00000469300 ERVK-7P63135 1459 aa17.44■□□□□ 0.38
LIMS2-213ENST00000469300 RTL1A6NKG5 1358 aa17.44■□□□□ 0.38
LIMS2-213ENST00000469300 ESPNB1AK53 854 aa17.44■□□□□ 0.38
LIMS2-213ENST00000469300 TSHZ3Q63HK5 1081 aa17.44■□□□□ 0.38
LIMS2-213ENST00000469300 DNAI2Q9GZS0 605 aa17.44■□□□□ 0.38
LIMS2-213ENST00000469300 TCP11L1Q9NUJ3 509 aa17.44■□□□□ 0.38
LIMS2-213ENST00000469300 SPATA31E1Q6ZUB1 1445 aa17.44■□□□□ 0.38
LIMS2-213ENST00000469300 RNF113AO15541 343 aaKnown RBP17.44■□□□□ 0.38
LIMS2-213ENST00000469300 ERCC4Q92889 916 aaPredicted RBP17.44■□□□□ 0.38
LIMS2-213ENST00000469300 DDX19AQ9NUU7 478 aaKnown RBP17.44■□□□□ 0.38
LIMS2-213ENST00000469300 USP21Q9UK80 565 aa17.44■□□□□ 0.38
LIMS2-213ENST00000469300 PA2G4Q9UQ80 394 aaKnown RBP17.44■□□□□ 0.38
LIMS2-213ENST00000469300 AATKQ6ZMQ8 1374 aa17.44■□□□□ 0.38
LIMS2-213ENST00000469300 EYA2O00167 538 aa17.44■□□□□ 0.38
LIMS2-213ENST00000469300 ZBTB43O43298 467 aa17.44■□□□□ 0.38
LIMS2-213ENST00000469300 PDE8AO60658 829 aa17.44■□□□□ 0.38
LIMS2-213ENST00000469300 MPHOSPH6Q99547 160 aaKnown RBP17.44■□□□□ 0.38
LIMS2-213ENST00000469300 STX8Q9UNK0 236 aa17.44■□□□□ 0.38
LIMS2-213ENST00000469300 STX6O43752 255 aa17.44■□□□□ 0.38
LIMS2-213ENST00000469300 ZMYND15Q9H091 742 aa17.44■□□□□ 0.38
LIMS2-213ENST00000469300 TSPY3P0CV98 308 aa17.43■□□□□ 0.38
LIMS2-213ENST00000469300 TSPY8P0CW00 308 aa17.43■□□□□ 0.38
LIMS2-213ENST00000469300 CCDC183Q5T5S1 534 aa17.43■□□□□ 0.38
LIMS2-213ENST00000469300 TRIM21P19474 475 aaKnown RBP17.43■□□□□ 0.38
LIMS2-213ENST00000469300 CCDC148Q8NFR7 591 aa17.43■□□□□ 0.38
LIMS2-213ENST00000469300 ERBB4Q15303 1308 aa17.43■□□□□ 0.38
LIMS2-213ENST00000469300 FAM135BQ49AJ0 1406 aa17.43■□□□□ 0.38
LIMS2-213ENST00000469300 MAGEB6P1A0A0J9YX57 407 aa17.43■□□□□ 0.38
LIMS2-213ENST00000469300 PRIM1P49642 420 aaKnown RBP17.43■□□□□ 0.38
LIMS2-213ENST00000469300 TSG101Q99816 390 aa17.43■□□□□ 0.38
LIMS2-213ENST00000469300 DENND2AQ9ULE3 1009 aa17.43■□□□□ 0.38
LIMS2-213ENST00000469300 TRIM35Q9UPQ4 493 aa17.43■□□□□ 0.38
LIMS2-213ENST00000469300 CALM1P0DP23 149 aa17.42■□□□□ 0.38
LIMS2-213ENST00000469300 CALM2P0DP24 149 aa17.42■□□□□ 0.38
LIMS2-213ENST00000469300 CALM3P0DP25 149 aa17.42■□□□□ 0.38
LIMS2-213ENST00000469300 AMPD3Q01432 767 aa17.42■□□□□ 0.38
LIMS2-213ENST00000469300 CFAP65Q6ZU64 1925 aaKnown RBP17.42■□□□□ 0.38
LIMS2-213ENST00000469300 BICC1Q9H694 974 aaKnown RBP17.42■□□□□ 0.38
LIMS2-213ENST00000469300 GJB2P29033 226 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms