RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 MS4A1P11836 297 aa10.8□□□□□ -0.68
SSBP1-208ENST00000469123 CTSWP56202 376 aa10.8□□□□□ -0.68
SSBP1-208ENST00000469123 ATF7IPQ6VMQ6 1270 aa10.8□□□□□ -0.68
SSBP1-208ENST00000469123 UBE3BQ7Z3V4 1068 aa10.8□□□□□ -0.68
SSBP1-208ENST00000469123 CDC5LQ99459 802 aaKnown RBP10.8□□□□□ -0.68
SSBP1-208ENST00000469123 UTYO14607 1347 aa10.8□□□□□ -0.68
SSBP1-208ENST00000469123 ABCC4O15439 1325 aa10.8□□□□□ -0.68
SSBP1-208ENST00000469123 SBF1O95248 1867 aa10.79□□□□□ -0.68
SSBP1-208ENST00000469123 PPEF1O14829 653 aaPredicted RBP10.79□□□□□ -0.68
SSBP1-208ENST00000469123 ZKSCAN2Q63HK3 967 aa10.79□□□□□ -0.68
SSBP1-208ENST00000469123 ARHGAP27Q6ZUM4 889 aa10.79□□□□□ -0.68
SSBP1-208ENST00000469123 C7orf43Q8WVR3 580 aa10.79□□□□□ -0.68
SSBP1-208ENST00000469123 TAOK3Q9H2K8 898 aa10.79□□□□□ -0.68
SSBP1-208ENST00000469123 C21orf2O43822 256 aa10.78□□□□□ -0.68
SSBP1-208ENST00000469123 CASP7P55210 303 aa10.78□□□□□ -0.68
SSBP1-208ENST00000469123 SYNE4Q8N205 404 aa10.78□□□□□ -0.68
SSBP1-208ENST00000469123 PSMD1Q99460 953 aa10.78□□□□□ -0.68
SSBP1-208ENST00000469123 VPS33BQ9H267 617 aa10.78□□□□□ -0.68
SSBP1-208ENST00000469123 ATP6V0A2Q9Y487 856 aa10.78□□□□□ -0.68
SSBP1-208ENST00000469123 DICER1Q9UPY3 1922 aaKnown RBP10.78□□□□□ -0.68
SSBP1-208ENST00000469123 CSF1RP07333 972 aa10.77□□□□□ -0.69
SSBP1-208ENST00000469123 TRIM27P14373 513 aa10.77□□□□□ -0.69
SSBP1-208ENST00000469123 LMNB1P20700 586 aa10.77□□□□□ -0.69
SSBP1-208ENST00000469123 RPS8P62241 208 aaKnown RBP10.77□□□□□ -0.69
SSBP1-208ENST00000469123 FKBP4Q02790 459 aaKnown RBP eCLIP10.77□□□□□ -0.69
SSBP1-208ENST00000469123 RTL5Q5HYW3 569 aaPredicted RBP10.77□□□□□ -0.69
SSBP1-208ENST00000469123 INTS3Q68E01 1043 aaKnown RBP10.77□□□□□ -0.69
SSBP1-208ENST00000469123 C3orf67Q6ZVT6 689 aa10.77□□□□□ -0.69
SSBP1-208ENST00000469123 ANKRD18AQ8IVF6 992 aa10.77□□□□□ -0.69
SSBP1-208ENST00000469123 SP8Q8IXZ3 490 aa10.77□□□□□ -0.69
SSBP1-208ENST00000469123 FTSJ3Q8IY81 847 aaKnown RBP10.77□□□□□ -0.69
SSBP1-208ENST00000469123 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.77□□□□□ -0.69
SSBP1-208ENST00000469123 SUPT20HQ8NEM7 779 aa10.77□□□□□ -0.69
SSBP1-208ENST00000469123 TTLL11Q8NHH1 800 aa10.77□□□□□ -0.69
SSBP1-208ENST00000469123 WWC3Q9ULE0 1092 aa10.77□□□□□ -0.69
SSBP1-208ENST00000469123 LRRC37AA6NMS7 1700 aa10.77□□□□□ -0.69
SSBP1-208ENST00000469123 GOLGB1Q14789 3259 aaKnown RBP10.76□□□□□ -0.69
SSBP1-208ENST00000469123 BCAR3O75815 825 aa10.76□□□□□ -0.69
SSBP1-208ENST00000469123 GNAI3P08754 354 aa10.76□□□□□ -0.69
SSBP1-208ENST00000469123 YY1P25490 414 aa10.76□□□□□ -0.69
SSBP1-208ENST00000469123 IGHMBP2P38935 993 aaKnown RBP10.76□□□□□ -0.69
SSBP1-208ENST00000469123 FRAT1Q92837 279 aaPredicted RBP10.76□□□□□ -0.69
SSBP1-208ENST00000469123 RCAN3Q9UKA8 241 aa10.76□□□□□ -0.69
SSBP1-208ENST00000469123 CCDC88AQ3V6T2 1871 aa10.76□□□□□ -0.69
SSBP1-208ENST00000469123 UTRNP46939 3433 aa10.75□□□□□ -0.69
SSBP1-208ENST00000469123 ANKRD18BA2A2Z9 1011 aa10.75□□□□□ -0.69
SSBP1-208ENST00000469123 UBTFL1P0CB47 393 aaPredicted RBP10.75□□□□□ -0.69
SSBP1-208ENST00000469123 IFIT5Q13325 482 aaKnown RBP10.75□□□□□ -0.69
SSBP1-208ENST00000469123 CHMP4BQ9H444 224 aaKnown RBP10.75□□□□□ -0.69
SSBP1-208ENST00000469123 BSDC1Q9NW68 430 aaPredicted RBP10.75□□□□□ -0.69
SSBP1-208ENST00000469123 SNED1Q8TER0 1413 aa10.75□□□□□ -0.69
SSBP1-208ENST00000469123 NFKBIEO00221 500 aa10.74□□□□□ -0.69
SSBP1-208ENST00000469123 ITGA6P23229 1130 aa10.74□□□□□ -0.69
SSBP1-208ENST00000469123 CCDC57Q2TAC2 916 aa10.74□□□□□ -0.69
SSBP1-208ENST00000469123 RABL6Q3YEC7 729 aaPredicted RBP10.74□□□□□ -0.69
SSBP1-208ENST00000469123 C9orf131Q5VYM1 1079 aa10.74□□□□□ -0.69
SSBP1-208ENST00000469123 DZIP1LQ8IYY4 767 aaKnown RBP10.74□□□□□ -0.69
SSBP1-208ENST00000469123 MPNDQ8N594 471 aa10.74□□□□□ -0.69
SSBP1-208ENST00000469123 MPHOSPH8Q99549 860 aa10.74□□□□□ -0.69
SSBP1-208ENST00000469123 RTFDC1Q9BY42 306 aaPredicted RBP10.74□□□□□ -0.69
SSBP1-208ENST00000469123 USP44Q9H0E7 712 aa10.74□□□□□ -0.69
SSBP1-208ENST00000469123 DAXXQ9UER7 740 aaPredicted RBP10.74□□□□□ -0.69
SSBP1-208ENST00000469123 TAF1P21675 1872 aa10.74□□□□□ -0.69
SSBP1-208ENST00000469123 NBPF7P0C2Y1 421 aaPredicted RBP10.73□□□□□ -0.69
SSBP1-208ENST00000469123 FOXO4P98177 505 aa10.73□□□□□ -0.69
SSBP1-208ENST00000469123 DPP8Q6V1X1 898 aaPredicted RBP10.73□□□□□ -0.69
SSBP1-208ENST00000469123 JARID2Q92833 1246 aaPredicted RBP10.73□□□□□ -0.69
SSBP1-208ENST00000469123 CELF1Q92879 486 aaKnown RBP10.73□□□□□ -0.69
SSBP1-208ENST00000469123 EYA3Q99504 573 aa10.73□□□□□ -0.69
SSBP1-208ENST00000469123 GREM2Q9H772 168 aa10.73□□□□□ -0.69
SSBP1-208ENST00000469123 PODXL2Q9NZ53 605 aa10.73□□□□□ -0.69
SSBP1-208ENST00000469123 RNF181Q9P0P0 153 aa10.73□□□□□ -0.69
SSBP1-208ENST00000469123 ZNF219Q9P2Y4 722 aaPredicted RBP10.73□□□□□ -0.69
SSBP1-208ENST00000469123 IARSP41252 1262 aaKnown RBP10.72□□□□□ -0.69
SSBP1-208ENST00000469123 RASSF7Q02833 373 aa10.72□□□□□ -0.69
SSBP1-208ENST00000469123 FAM161AQ3B820 660 aa10.72□□□□□ -0.69
SSBP1-208ENST00000469123 TAF7LQ5H9L4 462 aa10.72□□□□□ -0.69
SSBP1-208ENST00000469123 LMBR1LQ6UX01 489 aa10.72□□□□□ -0.69
SSBP1-208ENST00000469123 JDP2Q8WYK2 163 aa10.72□□□□□ -0.69
SSBP1-208ENST00000469123 SUCLG2Q96I99 432 aa10.72□□□□□ -0.69
SSBP1-208ENST00000469123 YTHDC1Q96MU7 727 aaKnown RBP10.72□□□□□ -0.69
SSBP1-208ENST00000469123 ANKRD2Q9GZV1 360 aa10.72□□□□□ -0.69
SSBP1-208ENST00000469123 SEC31BQ9NQW1 1179 aa10.72□□□□□ -0.69
SSBP1-208ENST00000469123 FBXO3Q9UK99 471 aa10.72□□□□□ -0.69
SSBP1-208ENST00000469123 CHMP3Q9Y3E7 222 aa10.72□□□□□ -0.69
SSBP1-208ENST00000469123 ATP2B4P23634 1241 aa10.71□□□□□ -0.69
SSBP1-208ENST00000469123 XDHP47989 1333 aa10.71□□□□□ -0.69
SSBP1-208ENST00000469123 PDE3AQ14432 1141 aa10.71□□□□□ -0.69
SSBP1-208ENST00000469123 LTBP1Q14766 1721 aa10.71□□□□□ -0.69
SSBP1-208ENST00000469123 DPY19L2Q6NUT2 758 aa10.71□□□□□ -0.69
SSBP1-208ENST00000469123 TIAM2Q8IVF5 1701 aa10.71□□□□□ -0.69
SSBP1-208ENST00000469123 BICC1Q9H694 974 aaKnown RBP10.71□□□□□ -0.69
SSBP1-208ENST00000469123 ANKIB1Q9P2G1 1089 aa10.71□□□□□ -0.69
SSBP1-208ENST00000469123 SPEF2Q9C093 1822 aa10.7□□□□□ -0.7
SSBP1-208ENST00000469123 KDM2BQ8NHM5 1336 aa10.7□□□□□ -0.7
SSBP1-208ENST00000469123 GNAI2P04899 355 aa10.7□□□□□ -0.7
SSBP1-208ENST00000469123 KIAA2012Q0VF49 1180 aa10.7□□□□□ -0.7
SSBP1-208ENST00000469123 ITPRIPQ8IWB1 547 aa10.7□□□□□ -0.7
SSBP1-208ENST00000469123 CLUAP1Q96AJ1 413 aa10.7□□□□□ -0.7
SSBP1-208ENST00000469123 KAZALD1Q96I82 304 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms