RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 KLK14Q9P0G3 267 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 FRRS1LQ9P0K9 344 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 LMOD1P29536 600 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-205ENST00000469043 ARSDP51689 593 aa8.23□□□□□ -1.09
SCFD1-205ENST00000469043 ARTNQ5T4W7 220 aa8.23□□□□□ -1.09
SCFD1-205ENST00000469043 DTWD1Q8N5C7 304 aa8.23□□□□□ -1.09
SCFD1-205ENST00000469043 TP53INP1Q96A56 240 aa8.23□□□□□ -1.09
SCFD1-205ENST00000469043 ZFP64Q9NPA5 681 aa8.23□□□□□ -1.09
SCFD1-205ENST00000469043 NAGPAQ9UK23 515 aa8.23□□□□□ -1.09
SCFD1-205ENST00000469043 FOXO3O43524 673 aa8.22□□□□□ -1.09
SCFD1-205ENST00000469043 DGKZQ13574 1117 aa8.22□□□□□ -1.09
SCFD1-205ENST00000469043 C11orf91Q3C1V1 193 aa8.22□□□□□ -1.09
SCFD1-205ENST00000469043 ELMSAN1Q6PJG2 1045 aa8.22□□□□□ -1.09
SCFD1-205ENST00000469043 DHX32Q7L7V1 743 aaKnown RBP8.22□□□□□ -1.09
SCFD1-205ENST00000469043 KRT25Q7Z3Z0 450 aa8.22□□□□□ -1.09
SCFD1-205ENST00000469043 PSMG3-AS1Q96PY0 264 aa8.22□□□□□ -1.09
SCFD1-205ENST00000469043 PODXL2Q9NZ53 605 aa8.22□□□□□ -1.09
SCFD1-205ENST00000469043 MICAL2O94851 1124 aa8.21□□□□□ -1.1
SCFD1-205ENST00000469043 RARAP10276 462 aa8.21□□□□□ -1.1
SCFD1-205ENST00000469043 TARSP26639 723 aaKnown RBP8.21□□□□□ -1.1
SCFD1-205ENST00000469043 FOXD4L6Q3SYB3 417 aaPredicted RBP8.21□□□□□ -1.1
SCFD1-205ENST00000469043 FOXD4L3Q6VB84 417 aaPredicted RBP8.21□□□□□ -1.1
SCFD1-205ENST00000469043 WFDC8Q8IUA0 241 aa8.21□□□□□ -1.1
SCFD1-205ENST00000469043 PERM1Q5SV97 790 aa8.2□□□□□ -1.1
SCFD1-205ENST00000469043 ILDR2Q71H61 639 aa8.2□□□□□ -1.1
SCFD1-205ENST00000469043 NBPF11Q86T75 865 aa8.2□□□□□ -1.1
SCFD1-205ENST00000469043 FBXO11Q86XK2 927 aa8.2□□□□□ -1.1
SCFD1-205ENST00000469043 FAM200AQ8TCP9 573 aa8.2□□□□□ -1.1
SCFD1-205ENST00000469043 TRPM4Q8TD43 1214 aa8.2□□□□□ -1.1
SCFD1-205ENST00000469043 TTC9Q92623 222 aa8.2□□□□□ -1.1
SCFD1-205ENST00000469043 IFT43Q96FT9 208 aa8.2□□□□□ -1.1
SCFD1-205ENST00000469043 LPIN3Q9BQK8 851 aa8.2□□□□□ -1.1
SCFD1-205ENST00000469043 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
SCFD1-205ENST00000469043 A6NJR5 290 aa8.19□□□□□ -1.1
SCFD1-205ENST00000469043 ZBTB42B2RXF5 422 aa8.19□□□□□ -1.1
SCFD1-205ENST00000469043 SASH3O75995 380 aa8.19□□□□□ -1.1
SCFD1-205ENST00000469043 GRNP28799 593 aaKnown RBP8.19□□□□□ -1.1
SCFD1-205ENST00000469043 WEE1P30291 646 aa8.19□□□□□ -1.1
SCFD1-205ENST00000469043 ZFATQ9P243 1243 aa8.19□□□□□ -1.1
SCFD1-205ENST00000469043 GPLD1P80108 840 aa8.18□□□□□ -1.1
SCFD1-205ENST00000469043 MLLT1Q03111 559 aaPredicted RBP8.18□□□□□ -1.1
SCFD1-205ENST00000469043 IGF2-ASQ6U949 168 aa8.18□□□□□ -1.1
SCFD1-205ENST00000469043 MYO19Q96H55 970 aa8.18□□□□□ -1.1
SCFD1-205ENST00000469043 QTRT2Q9H974 415 aaKnown RBP8.18□□□□□ -1.1
SCFD1-205ENST00000469043 GRIK5Q16478 980 aa8.17□□□□□ -1.1
SCFD1-205ENST00000469043 WFDC12Q8WWY7 111 aa8.17□□□□□ -1.1
SCFD1-205ENST00000469043 SUPT5HO00267 1087 aaKnown RBP8.16□□□□□ -1.1
SCFD1-205ENST00000469043 RFX1P22670 979 aa8.16□□□□□ -1.1
SCFD1-205ENST00000469043 IREB2P48200 963 aaKnown RBP8.16□□□□□ -1.1
SCFD1-205ENST00000469043 NRLP54845 237 aa8.16□□□□□ -1.1
SCFD1-205ENST00000469043 SSBP4Q9BWG4 385 aaPredicted RBP8.16□□□□□ -1.1
SCFD1-205ENST00000469043 SMG9Q9H0W8 520 aaKnown RBP8.16□□□□□ -1.1
SCFD1-205ENST00000469043 RTCBQ9Y3I0 505 aaKnown RBP8.16□□□□□ -1.1
SCFD1-205ENST00000469043 OPLAHO14841 1288 aa8.15□□□□□ -1.1
SCFD1-205ENST00000469043 EGFRP00533 1210 aa8.15□□□□□ -1.1
SCFD1-205ENST00000469043 LRP8Q14114 963 aa8.15□□□□□ -1.1
SCFD1-205ENST00000469043 HFE2Q6ZVN8 426 aa8.15□□□□□ -1.1
SCFD1-205ENST00000469043 CMTR1Q8N1G2 835 aaKnown RBP8.15□□□□□ -1.1
SCFD1-205ENST00000469043 TLR7Q9NYK1 1049 aaKnown RBP8.15□□□□□ -1.1
SCFD1-205ENST00000469043 XYLBO75191 536 aa8.14□□□□□ -1.11
SCFD1-205ENST00000469043 PSAPP07602 524 aa8.14□□□□□ -1.11
SCFD1-205ENST00000469043 EIF2AK2P19525 551 aaKnown RBP8.14□□□□□ -1.11
SCFD1-205ENST00000469043 RBSNQ9H1K0 784 aa8.14□□□□□ -1.11
SCFD1-205ENST00000469043 LOC102724428A0A0B4J2F2 783 aa8.13□□□□□ -1.11
SCFD1-205ENST00000469043 SIK1P57059 783 aa8.13□□□□□ -1.11
SCFD1-205ENST00000469043 PLAURQ03405 335 aa8.13□□□□□ -1.11
SCFD1-205ENST00000469043 TREML1Q86YW5 311 aa8.13□□□□□ -1.11
SCFD1-205ENST00000469043 RGL4Q8IZJ4 473 aa8.13□□□□□ -1.11
SCFD1-205ENST00000469043 GHRHP01286 108 aa8.12□□□□□ -1.11
SCFD1-205ENST00000469043 NOS3P29474 1203 aa8.12□□□□□ -1.11
SCFD1-205ENST00000469043 DCAF11Q8TEB1 546 aa8.12□□□□□ -1.11
SCFD1-205ENST00000469043 LRFN2Q9ULH4 789 aa8.12□□□□□ -1.11
SCFD1-205ENST00000469043 USP20Q9Y2K6 914 aa8.12□□□□□ -1.11
SCFD1-205ENST00000469043 HYAL3O43820 417 aaPredicted RBP8.11□□□□□ -1.11
SCFD1-205ENST00000469043 PLD4Q96BZ4 506 aa8.11□□□□□ -1.11
SCFD1-205ENST00000469043 J3QW42 95 aa8.1□□□□□ -1.11
SCFD1-205ENST00000469043 DEAF1O75398 565 aaPredicted RBP8.1□□□□□ -1.11
SCFD1-205ENST00000469043 CDCA8Q53HL2 280 aa8.1□□□□□ -1.11
SCFD1-205ENST00000469043 CFAP70Q5T0N1 1121 aa8.1□□□□□ -1.11
SCFD1-205ENST00000469043 AKTIPQ9H8T0 292 aa8.1□□□□□ -1.11
SCFD1-205ENST00000469043 SRA1Q9HD15 236 aaKnown RBP8.1□□□□□ -1.11
SCFD1-205ENST00000469043 NOVA2Q9UNW9 492 aaKnown RBP8.1□□□□□ -1.11
SCFD1-205ENST00000469043 DLL1O00548 723 aa8.09□□□□□ -1.11
SCFD1-205ENST00000469043 BRD2P25440 801 aaKnown RBP8.09□□□□□ -1.11
SCFD1-205ENST00000469043 SOX18P35713 384 aa8.09□□□□□ -1.11
SCFD1-205ENST00000469043 COX20Q5RI15 118 aa8.09□□□□□ -1.11
SCFD1-205ENST00000469043 GDF6Q6KF10 455 aaPredicted RBP8.09□□□□□ -1.11
SCFD1-205ENST00000469043 SLC51AQ86UW1 340 aa8.09□□□□□ -1.11
SCFD1-205ENST00000469043 CACTIN-AS1Q8N1I8 211 aa8.09□□□□□ -1.11
SCFD1-205ENST00000469043 IL22RA1Q8N6P7 574 aa8.09□□□□□ -1.11
SCFD1-205ENST00000469043 MRPL18Q9H0U6 180 aaKnown RBP8.09□□□□□ -1.11
SCFD1-205ENST00000469043 ZNF777Q9ULD5 760 aaPredicted RBP8.09□□□□□ -1.11
SCFD1-205ENST00000469043 MMP20O60882 483 aa8.08□□□□□ -1.12
SCFD1-205ENST00000469043 FKBP5Q13451 457 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-205ENST00000469043 SWI5Q1ZZU3 235 aa8.08□□□□□ -1.12
SCFD1-205ENST00000469043 PRR23CQ6ZRP0 262 aa8.08□□□□□ -1.12
SCFD1-205ENST00000469043 MAP4K3Q8IVH8 894 aa8.08□□□□□ -1.12
SCFD1-205ENST00000469043 TMEM130Q8N3G9 435 aa8.08□□□□□ -1.12
SCFD1-205ENST00000469043 MEGF10Q96KG7 1140 aa8.08□□□□□ -1.12
SCFD1-205ENST00000469043 PRIMPOLQ96LW4 560 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms