RNA–Protein interactions for RNA: ENST00000468027.5

PTMA-211, Transcript of prothymosin alpha, humanhuman

TSL 1 (best)

Gene PTMA, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-211ENST00000468027 CC2D2BQ6DHV5 1058 aa16.61■□□□□ 0.25
PTMA-211ENST00000468027 RTKN2Q8IZC4 609 aa16.61■□□□□ 0.25
PTMA-211ENST00000468027 JARID2Q92833 1246 aaPredicted RBP16.61■□□□□ 0.25
PTMA-211ENST00000468027 ATP6V0A2Q9Y487 856 aa16.61■□□□□ 0.25
PTMA-211ENST00000468027 F6X3S4 739 aa16.6■□□□□ 0.25
PTMA-211ENST00000468027 KIF3CO14782 793 aa16.6■□□□□ 0.25
PTMA-211ENST00000468027 BBOX1O75936 387 aa16.6■□□□□ 0.25
PTMA-211ENST00000468027 GRAPQ13588 217 aa16.6■□□□□ 0.25
PTMA-211ENST00000468027 GCKRQ14397 625 aa16.6■□□□□ 0.25
PTMA-211ENST00000468027 BEND3Q5T5X7 828 aa16.6■□□□□ 0.25
PTMA-211ENST00000468027 LINS1Q8NG48 757 aa16.6■□□□□ 0.25
PTMA-211ENST00000468027 GRAPLQ8TC17 118 aaPredicted RBP16.6■□□□□ 0.25
PTMA-211ENST00000468027 SSH1Q8WYL5 1049 aa16.6■□□□□ 0.25
PTMA-211ENST00000468027 ZNF646O15015 1829 aaPredicted RBP16.6■□□□□ 0.25
PTMA-211ENST00000468027 PDE8AO60658 829 aa16.59■□□□□ 0.25
PTMA-211ENST00000468027 SP8Q8IXZ3 490 aa16.59■□□□□ 0.25
PTMA-211ENST00000468027 ZNF526Q8TF50 670 aaPredicted RBP16.59■□□□□ 0.25
PTMA-211ENST00000468027 CELF1Q92879 486 aaKnown RBP16.59■□□□□ 0.25
PTMA-211ENST00000468027 GPBP1L1Q9HC44 474 aaPredicted RBP16.59■□□□□ 0.25
PTMA-211ENST00000468027 SCN9AQ15858 1988 aa16.58■□□□□ 0.25
PTMA-211ENST00000468027 NEXNQ0ZGT2 675 aa16.58■□□□□ 0.24
PTMA-211ENST00000468027 GRIPAP1Q4V328 841 aa16.58■□□□□ 0.24
PTMA-211ENST00000468027 DDX46Q7L014 1031 aaKnown RBP16.58■□□□□ 0.24
PTMA-211ENST00000468027 RTFDC1Q9BY42 306 aaPredicted RBP16.58■□□□□ 0.24
PTMA-211ENST00000468027 RTL9Q8NET4 1388 aa16.57■□□□□ 0.24
PTMA-211ENST00000468027 GLTPD2A6NH11 291 aa16.57■□□□□ 0.24
PTMA-211ENST00000468027 POTECB2RU33 542 aa16.57■□□□□ 0.24
PTMA-211ENST00000468027 CT47B1P0C2W7 299 aaPredicted RBP16.57■□□□□ 0.24
PTMA-211ENST00000468027 ALDH1L2Q3SY69 923 aa16.57■□□□□ 0.24
PTMA-211ENST00000468027 PLA2G12BQ9BX93 195 aa16.57■□□□□ 0.24
PTMA-211ENST00000468027 NMRK2Q9NPI5 230 aa16.57■□□□□ 0.24
PTMA-211ENST00000468027 SEC31BQ9NQW1 1179 aa16.57■□□□□ 0.24
PTMA-211ENST00000468027 ZNF277Q9NRM2 450 aaPredicted RBP16.57■□□□□ 0.24
PTMA-211ENST00000468027 IARSP41252 1262 aaKnown RBP16.56■□□□□ 0.24
PTMA-211ENST00000468027 BRPF1P55201 1214 aaPredicted RBP16.56■□□□□ 0.24
PTMA-211ENST00000468027 TTLL11Q8NHH1 800 aa16.56■□□□□ 0.24
PTMA-211ENST00000468027 CTSWP56202 376 aa16.55■□□□□ 0.24
PTMA-211ENST00000468027 TMC4Q7Z404 712 aa16.55■□□□□ 0.24
PTMA-211ENST00000468027 ADAMTSL1Q8N6G6 1762 aa16.55■□□□□ 0.24
PTMA-211ENST00000468027 PCNTO95613 3336 aa16.55■□□□□ 0.24
PTMA-211ENST00000468027 PTPRCP08575 1304 aa16.54■□□□□ 0.24
PTMA-211ENST00000468027 FZD9O00144 591 aa16.54■□□□□ 0.24
PTMA-211ENST00000468027 CSF1RP07333 972 aa16.54■□□□□ 0.24
PTMA-211ENST00000468027 HSP90B1P14625 803 aaKnown RBP16.54■□□□□ 0.24
PTMA-211ENST00000468027 UBE3BQ7Z3V4 1068 aa16.54■□□□□ 0.24
PTMA-211ENST00000468027 KDM2BQ8NHM5 1336 aa16.53■□□□□ 0.24
PTMA-211ENST00000468027 C1QTNF8P60827 252 aa16.53■□□□□ 0.24
PTMA-211ENST00000468027 RPS8P62241 208 aaKnown RBP16.53■□□□□ 0.24
PTMA-211ENST00000468027 CCDC152Q4G0S7 254 aa16.53■□□□□ 0.24
PTMA-211ENST00000468027 VPS33BQ9H267 617 aa16.53■□□□□ 0.24
PTMA-211ENST00000468027 UTYO14607 1347 aa16.52■□□□□ 0.24
PTMA-211ENST00000468027 ALDH1L1O75891 902 aa16.52■□□□□ 0.24
PTMA-211ENST00000468027 FOXO4P98177 505 aa16.52■□□□□ 0.24
PTMA-211ENST00000468027 HNRNPUQ00839 825 aaKnown RBP eCLIP16.52■□□□□ 0.24
PTMA-211ENST00000468027 BCL2L13Q9BXK5 485 aa16.52■□□□□ 0.24
PTMA-211ENST00000468027 GREM2Q9H772 168 aa16.52■□□□□ 0.24
PTMA-211ENST00000468027 ZNF541Q9H0D2 1346 aa16.51■□□□□ 0.23
PTMA-211ENST00000468027 RARSP54136 660 aaKnown RBP16.51■□□□□ 0.23
PTMA-211ENST00000468027 KAZALD1Q96I82 304 aa16.51■□□□□ 0.23
PTMA-211ENST00000468027 RRAGCQ9HB90 399 aa16.51■□□□□ 0.23
PTMA-211ENST00000468027 PODXL2Q9NZ53 605 aa16.51■□□□□ 0.23
PTMA-211ENST00000468027 ZBED9Q6R2W3 1325 aa16.5■□□□□ 0.23
PTMA-211ENST00000468027 DDNO94850 711 aaPredicted RBP16.5■□□□□ 0.23
PTMA-211ENST00000468027 GPSM2P81274 684 aa16.5■□□□□ 0.23
PTMA-211ENST00000468027 EPHA10Q5JZY3 1008 aa16.5■□□□□ 0.23
PTMA-211ENST00000468027 MPNDQ8N594 471 aa16.5■□□□□ 0.23
PTMA-211ENST00000468027 CCDC85AQ96PX6 553 aaPredicted RBP16.5■□□□□ 0.23
PTMA-211ENST00000468027 POLLQ9UGP5 575 aa16.5■□□□□ 0.23
PTMA-211ENST00000468027 GRM8O00222 908 aa16.49■□□□□ 0.23
PTMA-211ENST00000468027 KIAA2012Q0VF49 1180 aa16.49■□□□□ 0.23
PTMA-211ENST00000468027 DPP8Q6V1X1 898 aaPredicted RBP16.49■□□□□ 0.23
PTMA-211ENST00000468027 L3MBTL3Q96JM7 780 aaPredicted RBP16.49■□□□□ 0.23
PTMA-211ENST00000468027 SRCIN1Q9C0H9 1055 aa16.49■□□□□ 0.23
PTMA-211ENST00000468027 POLR2AP24928 1970 aaKnown RBP16.49■□□□□ 0.23
PTMA-211ENST00000468027 NBPF7P0C2Y1 421 aaPredicted RBP16.48■□□□□ 0.23
PTMA-211ENST00000468027 AOC3Q16853 763 aa16.48■□□□□ 0.23
PTMA-211ENST00000468027 DPY19L2Q6NUT2 758 aa16.48■□□□□ 0.23
PTMA-211ENST00000468027 SLC4A10Q6U841 1118 aa16.48■□□□□ 0.23
PTMA-211ENST00000468027 SMC4Q9NTJ3 1288 aa16.48■□□□□ 0.23
PTMA-211ENST00000468027 TOMM70O94826 608 aa16.47■□□□□ 0.23
PTMA-211ENST00000468027 FAM161AQ3B820 660 aa16.47■□□□□ 0.23
PTMA-211ENST00000468027 SUPT20HQ8NEM7 779 aa16.47■□□□□ 0.23
PTMA-211ENST00000468027 TBC1D16Q8TBP0 767 aa16.47■□□□□ 0.23
PTMA-211ENST00000468027 BSDC1Q9NW68 430 aaPredicted RBP16.47■□□□□ 0.23
PTMA-211ENST00000468027 WTIPA6NIX2 430 aaPredicted RBP16.46■□□□□ 0.23
PTMA-211ENST00000468027 YDJCA8MPS7 323 aa16.46■□□□□ 0.23
PTMA-211ENST00000468027 PPIP5K2O43314 1243 aa16.46■□□□□ 0.23
PTMA-211ENST00000468027 VEGFAP15692 232 aaPredicted RBP16.46■□□□□ 0.23
PTMA-211ENST00000468027 ANKRD18AQ8IVF6 992 aa16.46■□□□□ 0.23
PTMA-211ENST00000468027 LARGE2Q8N3Y3 721 aa16.46■□□□□ 0.23
PTMA-211ENST00000468027 USP44Q9H0E7 712 aa16.46■□□□□ 0.23
PTMA-211ENST00000468027 NOB1Q9ULX3 412 aaKnown RBP16.46■□□□□ 0.23
PTMA-211ENST00000468027 NSFL1CQ9UNZ2 370 aaKnown RBP16.46■□□□□ 0.23
PTMA-211ENST00000468027 ITGA6P23229 1130 aa16.45■□□□□ 0.22
PTMA-211ENST00000468027 GPC2Q8N158 579 aa16.45■□□□□ 0.22
PTMA-211ENST00000468027 RBM46Q8TBY0 533 aaKnown RBP16.45■□□□□ 0.22
PTMA-211ENST00000468027 JDP2Q8WYK2 163 aa16.45■□□□□ 0.22
PTMA-211ENST00000468027 ARHGAP45Q92619 1136 aa16.45■□□□□ 0.22
PTMA-211ENST00000468027 SUCLG2Q96I99 432 aa16.45■□□□□ 0.22
PTMA-211ENST00000468027 CDC5LQ99459 802 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms