RNA–Protein interactions for RNA: ENST00000467908.1

PDXK-209, Transcript of pyridoxal kinase, human

TSL 3 BASIC

Gene PDXK, Length 7,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDXK-209	ENST00000467908	NUCB2	P80303	420 aa		13.12	□□□□□ -0.31
PDXK-209	ENST00000467908	ERLIN1	O75477	346 aa		13.12	□□□□□ -0.31
PDXK-209	ENST00000467908	TRIM27	P14373	513 aa		13.12	□□□□□ -0.31
PDXK-209	ENST00000467908	IL16	Q14005	1332 aa		13.12	□□□□□ -0.31
PDXK-209	ENST00000467908	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.12	□□□□□ -0.31	2e-7	■■■■■ 36.4
PDXK-209	ENST00000467908	COPS6	Q7L5N1	327 aa		13.12	□□□□□ -0.31
PDXK-209	ENST00000467908	RPGR	Q92834	1020 aa	Known RBP	13.12	□□□□□ -0.31
PDXK-209	ENST00000467908	TSPY26P	Q9H489	355 aa		13.12	□□□□□ -0.31
PDXK-209	ENST00000467908	PTPRU	Q92729	1446 aa		13.12	□□□□□ -0.31
PDXK-209	ENST00000467908		A0A087WZG4	1122 aa		13.12	□□□□□ -0.31
PDXK-209	ENST00000467908	XAGE3	Q8WTP9	111 aa		13.12	□□□□□ -0.31
PDXK-209	ENST00000467908	TULP4	Q9NRJ4	1543 aa		13.12	□□□□□ -0.31
PDXK-209	ENST00000467908	CCDC158	Q5M9N0	1113 aa		13.12	□□□□□ -0.31
PDXK-209	ENST00000467908	TMOD2	Q9NZR1	351 aa		13.12	□□□□□ -0.31
PDXK-209	ENST00000467908	CCDC69	A6NI79	296 aa		13.11	□□□□□ -0.31
PDXK-209	ENST00000467908	SMARCC1	Q92922	1105 aa	Predicted RBP	13.11	□□□□□ -0.31
PDXK-209	ENST00000467908	DDX11	Q96FC9	970 aa		13.11	□□□□□ -0.31
PDXK-209	ENST00000467908	LRRCC1	Q9C099	1032 aa		13.11	□□□□□ -0.31
PDXK-209	ENST00000467908	SIGLEC1	Q9BZZ2	1709 aa		13.11	□□□□□ -0.31
PDXK-209	ENST00000467908	TMX1	Q9H3N1	280 aa		13.11	□□□□□ -0.31
PDXK-209	ENST00000467908	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.11	□□□□□ -0.31
PDXK-209	ENST00000467908	LRP2BP	Q9P2M1	347 aa		13.11	□□□□□ -0.31
PDXK-209	ENST00000467908	CCP110	O43303	1012 aa		13.11	□□□□□ -0.31
PDXK-209	ENST00000467908	ANKRD13D	Q6ZTN6	518 aa		13.11	□□□□□ -0.31
PDXK-209	ENST00000467908	ZFP91	Q96JP5	570 aa	Predicted RBP	13.11	□□□□□ -0.31
PDXK-209	ENST00000467908	INSR	P06213	1382 aa		13.1	□□□□□ -0.31
PDXK-209	ENST00000467908	STAMBP	O95630	424 aa		13.1	□□□□□ -0.31
PDXK-209	ENST00000467908	LMAN1	P49257	510 aa		13.1	□□□□□ -0.31
PDXK-209	ENST00000467908	MNAT1	P51948	309 aa		13.1	□□□□□ -0.31
PDXK-209	ENST00000467908	ERC2	O15083	957 aa		13.1	□□□□□ -0.31
PDXK-209	ENST00000467908	TDO2	P48775	406 aa		13.1	□□□□□ -0.31
PDXK-209	ENST00000467908	ZNF790	Q6PG37	636 aa		13.1	□□□□□ -0.31
PDXK-209	ENST00000467908	SHTN1	A0MZ66	631 aa		13.1	□□□□□ -0.31
PDXK-209	ENST00000467908	IL1RAPL2	Q9NP60	686 aa		13.1	□□□□□ -0.31
PDXK-209	ENST00000467908	GRPEL1	Q9HAV7	217 aa		13.1	□□□□□ -0.31
PDXK-209	ENST00000467908	TFCP2L1	Q9NZI6	479 aa		13.1	□□□□□ -0.31
PDXK-209	ENST00000467908	EXOC6B	Q9Y2D4	811 aa		13.1	□□□□□ -0.31
PDXK-209	ENST00000467908	MYO3A	Q8NEV4	1616 aa		13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	C6orf229	H3BNL8	230 aa		13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	SMARCE1	Q969G3	411 aa		13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	TIGD1	Q96MW7	591 aa		13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	SRRT	Q9BXP5	876 aa	Known RBP	13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	FILIP1L	Q4L180	1135 aa		13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	NAT10	Q9H0A0	1025 aa	Known RBP	13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	CFAP45	Q9UL16	551 aa		13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	TRIM35	Q9UPQ4	493 aa		13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	DIP2A	Q14689	1571 aa		13.09	□□□□□ -0.31
PDXK-209	ENST00000467908		F8W031	263 aa	Predicted RBP	13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	PPP1R12A	O14974	1030 aa	Predicted RBP	13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	TAF12	Q16514	161 aa		13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	RERE	Q9P2R6	1566 aa		13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	KIAA1210	Q9ULL0	1709 aa		13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	UBE3B	Q7Z3V4	1068 aa		13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	PTCH1	Q13635	1447 aa		13.09	□□□□□ -0.31
PDXK-209	ENST00000467908	PTPRC	P08575	1304 aa		13.08	□□□□□ -0.31
PDXK-209	ENST00000467908	POLR3G	O15318	223 aa	Predicted RBP	13.08	□□□□□ -0.31
PDXK-209	ENST00000467908	EPB41L2	O43491	1005 aa	Known RBP	13.08	□□□□□ -0.31
PDXK-209	ENST00000467908	SLC52A2	Q9HAB3	445 aa		13.08	□□□□□ -0.31
PDXK-209	ENST00000467908	PDZRN3	Q9UPQ7	1066 aa		13.08	□□□□□ -0.31
PDXK-209	ENST00000467908	C1orf167	Q5SNV9	1468 aa		13.08	□□□□□ -0.32
PDXK-209	ENST00000467908	TRPC5	Q9UL62	973 aa	Predicted RBP	13.08	□□□□□ -0.32
PDXK-209	ENST00000467908	POLR3D	P05423	398 aa	Predicted RBP	13.08	□□□□□ -0.32
PDXK-209	ENST00000467908	IGHMBP2	P38935	993 aa	Known RBP	13.08	□□□□□ -0.32
PDXK-209	ENST00000467908	AAMP	Q13685	434 aa		13.08	□□□□□ -0.32
PDXK-209	ENST00000467908	PLS1	Q14651	629 aa		13.08	□□□□□ -0.32
PDXK-209	ENST00000467908	RNF187	Q5TA31	235 aa	Predicted RBP	13.07	□□□□□ -0.32
PDXK-209	ENST00000467908	TMCO3	Q6UWJ1	677 aa		13.07	□□□□□ -0.32
PDXK-209	ENST00000467908	CWC25	Q9NXE8	425 aa	Predicted RBP	13.07	□□□□□ -0.32
PDXK-209	ENST00000467908	IQGAP1	P46940	1657 aa		13.07	□□□□□ -0.32
PDXK-209	ENST00000467908	HMGB2	P26583	209 aa	Known RBP	13.07	□□□□□ -0.32
PDXK-209	ENST00000467908	RTCB	Q9Y3I0	505 aa	Known RBP	13.07	□□□□□ -0.32
PDXK-209	ENST00000467908	UBR1	Q8IWV7	1749 aa		13.07	□□□□□ -0.32
PDXK-209	ENST00000467908	CCNL1	Q9UK58	526 aa	Predicted RBP	13.07	□□□□□ -0.32
PDXK-209	ENST00000467908	ITSN1	Q15811	1721 aa		13.07	□□□□□ -0.32
PDXK-209	ENST00000467908	GNPAT	O15228	680 aa		13.07	□□□□□ -0.32
PDXK-209	ENST00000467908	CTNNA2	P26232	953 aa		13.07	□□□□□ -0.32
PDXK-209	ENST00000467908	CCDC96	Q2M329	555 aa		13.07	□□□□□ -0.32
PDXK-209	ENST00000467908	CCDC91	Q7Z6B0	441 aa		13.07	□□□□□ -0.32
PDXK-209	ENST00000467908	AXIN2	Q9Y2T1	843 aa		13.07	□□□□□ -0.32
PDXK-209	ENST00000467908	SERPINC1	P01008	464 aa		13.06	□□□□□ -0.32
PDXK-209	ENST00000467908	AACS	Q86V21	672 aa		13.06	□□□□□ -0.32
PDXK-209	ENST00000467908	DZIP3	Q86Y13	1208 aa	Known RBP	13.06	□□□□□ -0.32
PDXK-209	ENST00000467908	MINDY4B	A8MYZ0	360 aa		13.06	□□□□□ -0.32
PDXK-209	ENST00000467908	HSPA1L	P34931	641 aa		13.06	□□□□□ -0.32
PDXK-209	ENST00000467908	CARD10	Q9BWT7	1032 aa		13.06	□□□□□ -0.32
PDXK-209	ENST00000467908	IDH1	O75874	414 aa	Known RBP	13.06	□□□□□ -0.32
PDXK-209	ENST00000467908	APBA3	O96018	575 aa		13.06	□□□□□ -0.32
PDXK-209	ENST00000467908	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.06	□□□□□ -0.32
PDXK-209	ENST00000467908	PHKG2	P15735	406 aa		13.06	□□□□□ -0.32
PDXK-209	ENST00000467908	GNL1	P36915	607 aa	Predicted RBP	13.06	□□□□□ -0.32
PDXK-209	ENST00000467908	METTL24	Q5JXM2	366 aa		13.06	□□□□□ -0.32
PDXK-209	ENST00000467908	MAP2K1	Q02750	393 aa	Predicted RBP	13.05	□□□□□ -0.32
PDXK-209	ENST00000467908	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.05	□□□□□ -0.32
PDXK-209	ENST00000467908	SETDB2	Q96T68	719 aa		13.05	□□□□□ -0.32
PDXK-209	ENST00000467908	CEP126	Q9P2H0	1117 aa		13.05	□□□□□ -0.32
PDXK-209	ENST00000467908	SAMM50	Q9Y512	469 aa		13.05	□□□□□ -0.32
PDXK-209	ENST00000467908	AATK	Q6ZMQ8	1374 aa		13.05	□□□□□ -0.32
PDXK-209	ENST00000467908	TNS3	Q68CZ2	1445 aa		13.05	□□□□□ -0.32
PDXK-209	ENST00000467908	PPP4R3B	Q5MIZ7	849 aa		13.05	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms