RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 ANKRD36CQ5JPF3 1778 aa16.11■□□□□ 0.17
UBR4-211ENST00000467272 CIAPIN1Q6FI81 312 aa16.11■□□□□ 0.17
UBR4-211ENST00000467272 DPP8Q6V1X1 898 aaPredicted RBP16.11■□□□□ 0.17
UBR4-211ENST00000467272 BEGAINQ9BUH8 593 aa16.11■□□□□ 0.17
UBR4-211ENST00000467272 TSKSQ9UJT2 592 aa16.11■□□□□ 0.17
UBR4-211ENST00000467272 LRRC37AA6NMS7 1700 aa16.11■□□□□ 0.17
UBR4-211ENST00000467272 LAMB2P55268 1798 aa16.1■□□□□ 0.17
UBR4-211ENST00000467272 SHTN1A0MZ66 631 aa16.1■□□□□ 0.17
UBR4-211ENST00000467272 GRAPQ13588 217 aa16.1■□□□□ 0.17
UBR4-211ENST00000467272 MPNDQ8N594 471 aa16.1■□□□□ 0.17
UBR4-211ENST00000467272 GRAPLQ8TC17 118 aaPredicted RBP16.1■□□□□ 0.17
UBR4-211ENST00000467272 ZIC5Q96T25 663 aa16.1■□□□□ 0.17
UBR4-211ENST00000467272 RAD17O75943 681 aa16.09■□□□□ 0.17
UBR4-211ENST00000467272 ANXA1P04083 346 aa16.09■□□□□ 0.17
UBR4-211ENST00000467272 HCLS1P14317 486 aaPredicted RBP16.09■□□□□ 0.17
UBR4-211ENST00000467272 MLLT1Q03111 559 aaPredicted RBP16.09■□□□□ 0.17
UBR4-211ENST00000467272 TCIRG1Q13488 830 aa16.09■□□□□ 0.17
UBR4-211ENST00000467272 TNIP1Q15025 636 aa16.09■□□□□ 0.17
UBR4-211ENST00000467272 CDC37L1Q7L3B6 337 aa16.09■□□□□ 0.17
UBR4-211ENST00000467272 DPF2Q92785 391 aa16.09■□□□□ 0.17
UBR4-211ENST00000467272 MCOLN1Q9GZU1 580 aa16.09■□□□□ 0.17
UBR4-211ENST00000467272 TSPYL4Q9UJ04 414 aa16.09■□□□□ 0.17
UBR4-211ENST00000467272 CCDC85CA6NKD9 419 aa16.08■□□□□ 0.16
UBR4-211ENST00000467272 FAM155AB1AL88 458 aaPredicted RBP16.08■□□□□ 0.16
UBR4-211ENST00000467272 GRM1Q13255 1194 aa16.08■□□□□ 0.16
UBR4-211ENST00000467272 PAXIP1Q6ZW49 1069 aaPredicted RBP16.08■□□□□ 0.16
UBR4-211ENST00000467272 COPS6Q7L5N1 327 aa16.08■□□□□ 0.16
UBR4-211ENST00000467272 TMC4Q7Z404 712 aa16.08■□□□□ 0.16
UBR4-211ENST00000467272 CNOT7Q9UIV1 285 aaKnown RBP16.08■□□□□ 0.16
UBR4-211ENST00000467272 COL4A1P02462 1669 aa16.08■□□□□ 0.16
UBR4-211ENST00000467272 HSP90AB3PQ58FF7 597 aa16.07■□□□□ 0.16
UBR4-211ENST00000467272 DLK2Q6UY11 383 aa16.07■□□□□ 0.16
UBR4-211ENST00000467272 XAGE3Q8WTP9 111 aa16.07■□□□□ 0.16
UBR4-211ENST00000467272 SH3TC1Q8TE82 1336 aa16.06■□□□□ 0.16
UBR4-211ENST00000467272 EGFRP00533 1210 aa16.06■□□□□ 0.16
UBR4-211ENST00000467272 NEFMP07197 916 aa16.06■□□□□ 0.16
UBR4-211ENST00000467272 EIF2S2P20042 333 aaKnown RBP16.06■□□□□ 0.16
UBR4-211ENST00000467272 NOGQ13253 232 aa16.06■□□□□ 0.16
UBR4-211ENST00000467272 SF3B3Q15393 1217 aaKnown RBP16.06■□□□□ 0.16
UBR4-211ENST00000467272 DDX46Q7L014 1031 aaKnown RBP16.06■□□□□ 0.16
UBR4-211ENST00000467272 MICALL2Q8IY33 904 aa16.06■□□□□ 0.16
UBR4-211ENST00000467272 TMX4Q9H1E5 349 aaPredicted RBP16.06■□□□□ 0.16
UBR4-211ENST00000467272 RTL9Q8NET4 1388 aa16.05■□□□□ 0.16
UBR4-211ENST00000467272 CHL1O00533 1208 aa16.05■□□□□ 0.16
UBR4-211ENST00000467272 USP48Q86UV5 1035 aa16.05■□□□□ 0.16
UBR4-211ENST00000467272 PNNQ9H307 717 aaKnown RBP16.05■□□□□ 0.16
UBR4-211ENST00000467272 TRMT112Q9UI30 125 aaKnown RBP16.05■□□□□ 0.16
UBR4-211ENST00000467272 PSMD14O00487 310 aa16.04■□□□□ 0.16
UBR4-211ENST00000467272 RIPK4P57078 832 aa16.04■□□□□ 0.16
UBR4-211ENST00000467272 ISCA1Q9BUE6 129 aa16.04■□□□□ 0.16
UBR4-211ENST00000467272 BCL2L13Q9BXK5 485 aa16.04■□□□□ 0.16
UBR4-211ENST00000467272 POLLQ9UGP5 575 aa16.04■□□□□ 0.16
UBR4-211ENST00000467272 ZBTB12Q9Y330 459 aaPredicted RBP16.04■□□□□ 0.16
UBR4-211ENST00000467272 MAPK8IP3Q9UPT6 1336 aa16.03■□□□□ 0.16
UBR4-211ENST00000467272 TMPOP42166 694 aaKnown RBP16.03■□□□□ 0.16
UBR4-211ENST00000467272 SAMD7Q7Z3H4 446 aa16.03■□□□□ 0.16
UBR4-211ENST00000467272 CELF1Q92879 486 aaKnown RBP16.03■□□□□ 0.16
UBR4-211ENST00000467272 KCNQ5Q9NR82 932 aa16.03■□□□□ 0.16
UBR4-211ENST00000467272 SAGE1Q9NXZ1 904 aa16.03■□□□□ 0.16
UBR4-211ENST00000467272 ZNF609O15014 1411 aa16.02■□□□□ 0.16
UBR4-211ENST00000467272 DDX60Q8IY21 1712 aaKnown RBP16.02■□□□□ 0.16
UBR4-211ENST00000467272 H7C1D1 291 aa16.02■□□□□ 0.16
UBR4-211ENST00000467272 RPS12P25398 132 aaKnown RBP16.02■□□□□ 0.16
UBR4-211ENST00000467272 HUNKP57058 714 aa16.02■□□□□ 0.16
UBR4-211ENST00000467272 TRIM28Q13263 835 aaKnown RBP16.02■□□□□ 0.16
UBR4-211ENST00000467272 KRT24Q2M2I5 525 aa16.02■□□□□ 0.16
UBR4-211ENST00000467272 TAF1P21675 1872 aa16.01■□□□□ 0.15
UBR4-211ENST00000467272 AIMP1Q12904 312 aaKnown RBP16.01■□□□□ 0.15
UBR4-211ENST00000467272 WASHC4Q2M389 1173 aa16.01■□□□□ 0.15
UBR4-211ENST00000467272 RGMBQ6NW40 437 aa16.01■□□□□ 0.15
UBR4-211ENST00000467272 PLBD2Q8NHP8 589 aa16.01■□□□□ 0.15
UBR4-211ENST00000467272 ZNF408Q9H9D4 720 aa16.01■□□□□ 0.15
UBR4-211ENST00000467272 CASP8AP2Q9UKL3 1982 aa16■□□□□ 0.15
UBR4-211ENST00000467272 PDE4DIPQ5VU43 2346 aa16■□□□□ 0.15
UBR4-211ENST00000467272 GPSM2P81274 684 aa16■□□□□ 0.15
UBR4-211ENST00000467272 DGKZQ13574 1117 aa16■□□□□ 0.15
UBR4-211ENST00000467272 KRT26Q7Z3Y9 468 aa16■□□□□ 0.15
UBR4-211ENST00000467272 DBNDD1Q9H9R9 158 aa16■□□□□ 0.15
UBR4-211ENST00000467272 PODXL2Q9NZ53 605 aa16■□□□□ 0.15
UBR4-211ENST00000467272 TRIM35Q9UPQ4 493 aa16■□□□□ 0.15
UBR4-211ENST00000467272 ADM5C9JUS6 153 aa15.99■□□□□ 0.15
UBR4-211ENST00000467272 VIL1P09327 827 aaKnown RBP15.99■□□□□ 0.15
UBR4-211ENST00000467272 HOXB7P09629 217 aa15.99■□□□□ 0.15
UBR4-211ENST00000467272 TBC1D10BQ4KMP7 808 aaPredicted RBP15.99■□□□□ 0.15
UBR4-211ENST00000467272 TBC1D16Q8TBP0 767 aa15.99■□□□□ 0.15
UBR4-211ENST00000467272 NECTIN2Q92692 538 aa15.99■□□□□ 0.15
UBR4-211ENST00000467272 CCDC102AQ96A19 550 aa15.99■□□□□ 0.15
UBR4-211ENST00000467272 FAM89AQ96GI7 184 aa15.99■□□□□ 0.15
UBR4-211ENST00000467272 GBA2Q9HCG7 927 aaPredicted RBP15.99■□□□□ 0.15
UBR4-211ENST00000467272 CHPF2Q9P2E5 772 aa15.99■□□□□ 0.15
UBR4-211ENST00000467272 ECE2O60344 883 aa15.98■□□□□ 0.15
UBR4-211ENST00000467272 ZNF280AP59817 542 aaPredicted RBP15.98■□□□□ 0.15
UBR4-211ENST00000467272 KIF23Q02241 960 aaPredicted RBP15.98■□□□□ 0.15
UBR4-211ENST00000467272 LMOD3Q0VAK6 560 aa15.98■□□□□ 0.15
UBR4-211ENST00000467272 ANKRD13DQ6ZTN6 518 aa15.98■□□□□ 0.15
UBR4-211ENST00000467272 RNF186Q9NXI6 227 aa15.98■□□□□ 0.15
UBR4-211ENST00000467272 NSFL1CQ9UNZ2 370 aaKnown RBP15.98■□□□□ 0.15
UBR4-211ENST00000467272 SLC10A3P09131 477 aa15.97■□□□□ 0.15
UBR4-211ENST00000467272 GMLQ99445 158 aa15.97■□□□□ 0.15
UBR4-211ENST00000467272 PCDH10Q9P2E7 1040 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms