RNA–Protein interactions for RNA: ENST00000465669.1

RAPH1-212, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

TSL 2

Gene RAPH1, Length 360 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-212ENST00000465669 TAF1P21675 1872 aa29.29■■■□□ 2.28
RAPH1-212ENST00000465669 CCDC88AQ3V6T2 1871 aa29.29■■■□□ 2.28
RAPH1-212ENST00000465669 LTBP3Q9NS15 1303 aa29.29■■■□□ 2.28
RAPH1-212ENST00000465669 BBOX1O75936 387 aa29.29■■■□□ 2.28
RAPH1-212ENST00000465669 FKBP4Q02790 459 aaKnown RBP eCLIP29.29■■■□□ 2.28
RAPH1-212ENST00000465669 CELF1Q92879 486 aaKnown RBP29.29■■■□□ 2.28
RAPH1-212ENST00000465669 TMX4Q9H1E5 349 aaPredicted RBP29.29■■■□□ 2.28
RAPH1-212ENST00000465669 ZBED9Q6R2W3 1325 aa29.28■■■□□ 2.28
RAPH1-212ENST00000465669 CC2D2BQ6DHV5 1058 aa29.28■■■□□ 2.28
RAPH1-212ENST00000465669 SEC31BQ9NQW1 1179 aa29.28■■■□□ 2.28
RAPH1-212ENST00000465669 ZNF277Q9NRM2 450 aaPredicted RBP29.28■■■□□ 2.28
RAPH1-212ENST00000465669 ATP6V0A2Q9Y487 856 aa29.28■■■□□ 2.28
RAPH1-212ENST00000465669 PTPRCP08575 1304 aa29.27■■■□□ 2.28
RAPH1-212ENST00000465669 CCDC152Q4G0S7 254 aa29.27■■■□□ 2.28
RAPH1-212ENST00000465669 SRCIN1Q9C0H9 1055 aa29.26■■■□□ 2.27
RAPH1-212ENST00000465669 GPBP1L1Q9HC44 474 aaPredicted RBP29.26■■■□□ 2.27
RAPH1-212ENST00000465669 RARSP54136 660 aaKnown RBP29.25■■■□□ 2.27
RAPH1-212ENST00000465669 CTSWP56202 376 aa29.25■■■□□ 2.27
RAPH1-212ENST00000465669 SP8Q8IXZ3 490 aa29.25■■■□□ 2.27
RAPH1-212ENST00000465669 CASP7P55210 303 aa29.24■■■□□ 2.27
RAPH1-212ENST00000465669 NOB1Q9ULX3 412 aaKnown RBP29.24■■■□□ 2.27
RAPH1-212ENST00000465669 SNED1Q8TER0 1413 aa29.23■■■□□ 2.27
RAPH1-212ENST00000465669 COL4A1P02462 1669 aa29.23■■■□□ 2.27
RAPH1-212ENST00000465669 ALDH1L1O75891 902 aa29.22■■■□□ 2.27
RAPH1-212ENST00000465669 RPS8P62241 208 aaKnown RBP29.22■■■□□ 2.27
RAPH1-212ENST00000465669 TTLL11Q8NHH1 800 aa29.22■■■□□ 2.27
RAPH1-212ENST00000465669 PSMD1Q99460 953 aa29.22■■■□□ 2.27
RAPH1-212ENST00000465669 C9orf78Q9NZ63 289 aaPredicted RBP29.22■■■□□ 2.27
RAPH1-212ENST00000465669 GRM8O00222 908 aa29.2■■■□□ 2.26
RAPH1-212ENST00000465669 IARSP41252 1262 aaKnown RBP29.2■■■□□ 2.26
RAPH1-212ENST00000465669 GRIPAP1Q4V328 841 aa29.2■■■□□ 2.26
RAPH1-212ENST00000465669 TMC4Q7Z404 712 aa29.2■■■□□ 2.26
RAPH1-212ENST00000465669 MPNDQ8N594 471 aa29.2■■■□□ 2.26
RAPH1-212ENST00000465669 GREM2Q9H772 168 aa29.2■■■□□ 2.26
RAPH1-212ENST00000465669 DPP8Q6V1X1 898 aaPredicted RBP29.19■■■□□ 2.26
RAPH1-212ENST00000465669 PLA2G12BQ9BX93 195 aa29.19■■■□□ 2.26
RAPH1-212ENST00000465669 ZC3H4Q9UPT8 1303 aaKnown RBP29.18■■■□□ 2.26
RAPH1-212ENST00000465669 TIAM2Q8IVF5 1701 aa29.17■■■□□ 2.26
RAPH1-212ENST00000465669 ANKRD18AQ8IVF6 992 aa29.17■■■□□ 2.26
RAPH1-212ENST00000465669 DICER1Q9UPY3 1922 aaKnown RBP29.16■■■□□ 2.26
RAPH1-212ENST00000465669 BCAR3O75815 825 aa29.16■■■□□ 2.26
RAPH1-212ENST00000465669 BRPF1P55201 1214 aaPredicted RBP29.16■■■□□ 2.26
RAPH1-212ENST00000465669 NMRK2Q9NPI5 230 aa29.16■■■□□ 2.26
RAPH1-212ENST00000465669 FAM161AQ3B820 660 aa29.15■■■□□ 2.26
RAPH1-212ENST00000465669 CDC5LQ99459 802 aaKnown RBP29.15■■■□□ 2.26
RAPH1-212ENST00000465669 NSFL1CQ9UNZ2 370 aaKnown RBP29.15■■■□□ 2.26
RAPH1-212ENST00000465669 CHMP3Q9Y3E7 222 aa29.15■■■□□ 2.26
RAPH1-212ENST00000465669 MYH3P11055 1940 aa29.15■■■□□ 2.26
RAPH1-212ENST00000465669 KDM2BQ8NHM5 1336 aa29.15■■■□□ 2.26
RAPH1-212ENST00000465669 GPSM2P81274 684 aa29.14■■■□□ 2.26
RAPH1-212ENST00000465669 FOXO4P98177 505 aa29.14■■■□□ 2.26
RAPH1-212ENST00000465669 EPHA10Q5JZY3 1008 aa29.14■■■□□ 2.26
RAPH1-212ENST00000465669 LARGE2Q8N3Y3 721 aa29.14■■■□□ 2.26
RAPH1-212ENST00000465669 API5Q9BZZ5 524 aaKnown RBP29.14■■■□□ 2.26
RAPH1-212ENST00000465669 GLTPD2A6NH11 291 aa29.13■■■□□ 2.25
RAPH1-212ENST00000465669 PPIP5K2O43314 1243 aa29.13■■■□□ 2.25
RAPH1-212ENST00000465669 CSF1RP07333 972 aa29.13■■■□□ 2.25
RAPH1-212ENST00000465669 NBPF7P0C2Y1 421 aaPredicted RBP29.13■■■□□ 2.25
RAPH1-212ENST00000465669 AOC3Q16853 763 aa29.13■■■□□ 2.25
RAPH1-212ENST00000465669 SUPT20HQ8NEM7 779 aa29.13■■■□□ 2.25
RAPH1-212ENST00000465669 ITGA6P23229 1130 aa29.12■■■□□ 2.25
RAPH1-212ENST00000465669 DPY19L2Q6NUT2 758 aa29.12■■■□□ 2.25
RAPH1-212ENST00000465669 JDP2Q8WYK2 163 aa29.12■■■□□ 2.25
RAPH1-212ENST00000465669 FRAT1Q92837 279 aaPredicted RBP29.12■■■□□ 2.25
RAPH1-212ENST00000465669 SUCLG2Q96I99 432 aa29.12■■■□□ 2.25
RAPH1-212ENST00000465669 RRAGCQ9HB90 399 aa29.12■■■□□ 2.25
RAPH1-212ENST00000465669 KIF16BQ96L93 1317 aa29.12■■■□□ 2.25
RAPH1-212ENST00000465669 LMBR1LQ6UX01 489 aa29.11■■■□□ 2.25
RAPH1-212ENST00000465669 RTFDC1Q9BY42 306 aaPredicted RBP29.11■■■□□ 2.25
RAPH1-212ENST00000465669 RTL9Q8NET4 1388 aa29.11■■■□□ 2.25
RAPH1-212ENST00000465669 COL4A5P29400 1685 aa29.09■■■□□ 2.25
RAPH1-212ENST00000465669 LRRC37AA6NMS7 1700 aa29.09■■■□□ 2.25
RAPH1-212ENST00000465669 C6orf229H3BNL8 230 aa29.09■■■□□ 2.25
RAPH1-212ENST00000465669 KIF3CO14782 793 aa29.09■■■□□ 2.25
RAPH1-212ENST00000465669 DDNO94850 711 aaPredicted RBP29.09■■■□□ 2.25
RAPH1-212ENST00000465669 ANKIB1Q9P2G1 1089 aa29.09■■■□□ 2.25
RAPH1-212ENST00000465669 ZNF541Q9H0D2 1346 aa29.09■■■□□ 2.25
RAPH1-212ENST00000465669 ANKRD18BA2A2Z9 1011 aa29.08■■■□□ 2.25
RAPH1-212ENST00000465669 IGHMBP2P38935 993 aaKnown RBP29.08■■■□□ 2.25
RAPH1-212ENST00000465669 CCT4P50991 539 aaKnown RBP29.08■■■□□ 2.25
RAPH1-212ENST00000465669 NIM1KQ8IY84 436 aa29.08■■■□□ 2.25
RAPH1-212ENST00000465669 GPR101Q96P66 508 aaPredicted RBP29.08■■■□□ 2.25
RAPH1-212ENST00000465669 POLLQ9UGP5 575 aa29.08■■■□□ 2.25
RAPH1-212ENST00000465669 TNNQ9UQP3 1299 aa29.08■■■□□ 2.25
RAPH1-212ENST00000465669 UTYO14607 1347 aa29.07■■■□□ 2.24
RAPH1-212ENST00000465669 IPO8O15397 1037 aaKnown RBP29.07■■■□□ 2.24
RAPH1-212ENST00000465669 ARHGAP45Q92619 1136 aa29.07■■■□□ 2.24
RAPH1-212ENST00000465669 USP44Q9H0E7 712 aa29.07■■■□□ 2.24
RAPH1-212ENST00000465669 FZD9O00144 591 aa29.06■■■□□ 2.24
RAPH1-212ENST00000465669 RIMBP2O15034 1052 aa29.06■■■□□ 2.24
RAPH1-212ENST00000465669 IFIT5Q13325 482 aaKnown RBP29.06■■■□□ 2.24
RAPH1-212ENST00000465669 KAZALD1Q96I82 304 aa29.06■■■□□ 2.24
RAPH1-212ENST00000465669 BSDC1Q9NW68 430 aaPredicted RBP29.06■■■□□ 2.24
RAPH1-212ENST00000465669 DUOX1Q9NRD9 1551 aa29.05■■■□□ 2.24
RAPH1-212ENST00000465669 KIAA2012Q0VF49 1180 aa29.05■■■□□ 2.24
RAPH1-212ENST00000465669 TBC1D16Q8TBP0 767 aa29.05■■■□□ 2.24
RAPH1-212ENST00000465669 MPHOSPH8Q99549 860 aa29.05■■■□□ 2.24
RAPH1-212ENST00000465669 VPS33BQ9H267 617 aa29.05■■■□□ 2.24
RAPH1-212ENST00000465669 SPEF2Q9C093 1822 aa29.05■■■□□ 2.24
RAPH1-212ENST00000465669 UFL1O94874 794 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms