RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 NFKBIEO00221 500 aa12.7□□□□□ -0.38
CTNNB1-211ENST00000465552 CWF19L2Q2TBE0 894 aaKnown RBP12.7□□□□□ -0.38
CTNNB1-211ENST00000465552 CRY2Q49AN0 593 aa12.7□□□□□ -0.38
CTNNB1-211ENST00000465552 NLRP3Q96P20 1036 aa12.7□□□□□ -0.38
CTNNB1-211ENST00000465552 METTL22Q9BUU2 404 aaPredicted RBP12.7□□□□□ -0.38
CTNNB1-211ENST00000465552 RNF181Q9P0P0 153 aa12.7□□□□□ -0.38
CTNNB1-211ENST00000465552 RNF123Q5XPI4 1314 aa12.69□□□□□ -0.38
CTNNB1-211ENST00000465552 F6X3S4 739 aa12.69□□□□□ -0.38
CTNNB1-211ENST00000465552 PRELPP51888 382 aa12.69□□□□□ -0.38
CTNNB1-211ENST00000465552 C9orf131Q5VYM1 1079 aa12.69□□□□□ -0.38
CTNNB1-211ENST00000465552 CWC25Q9NXE8 425 aaPredicted RBP12.69□□□□□ -0.38
CTNNB1-211ENST00000465552 ABCC4O15439 1325 aa12.68□□□□□ -0.38
CTNNB1-211ENST00000465552 PSME4Q14997 1843 aa12.68□□□□□ -0.38
CTNNB1-211ENST00000465552 IGKV5-2P06315 115 aa12.68□□□□□ -0.38
CTNNB1-211ENST00000465552 NEXNQ0ZGT2 675 aa12.68□□□□□ -0.38
CTNNB1-211ENST00000465552 DNAAF4Q8WXU2 420 aa12.68□□□□□ -0.38
CTNNB1-211ENST00000465552 RBM17Q96I25 401 aaKnown RBP12.68□□□□□ -0.38
CTNNB1-211ENST00000465552 DUOX1Q9NRD9 1551 aa12.68□□□□□ -0.38
CTNNB1-211ENST00000465552 IRS4O14654 1257 aaPredicted RBP12.67□□□□□ -0.38
CTNNB1-211ENST00000465552 PPEF1O14829 653 aaPredicted RBP12.67□□□□□ -0.38
CTNNB1-211ENST00000465552 ALDH1B1P30837 517 aa12.67□□□□□ -0.38
CTNNB1-211ENST00000465552 CCDC93Q567U6 631 aa12.67□□□□□ -0.38
CTNNB1-211ENST00000465552 SLC10A5Q5PT55 438 aa12.67□□□□□ -0.38
CTNNB1-211ENST00000465552 CCDC191Q8NCU4 936 aa12.67□□□□□ -0.38
CTNNB1-211ENST00000465552 CCDC85AQ96PX6 553 aaPredicted RBP12.67□□□□□ -0.38
CTNNB1-211ENST00000465552 FARP1Q9Y4F1 1045 aaPredicted RBP12.67□□□□□ -0.38
CTNNB1-211ENST00000465552 COL4A5P29400 1685 aa12.67□□□□□ -0.38
CTNNB1-211ENST00000465552 MYH13Q9UKX3 1938 aa12.66□□□□□ -0.38
CTNNB1-211ENST00000465552 SNED1Q8TER0 1413 aa12.66□□□□□ -0.38
CTNNB1-211ENST00000465552 NEURL1BA8MQ27 555 aa12.66□□□□□ -0.38
CTNNB1-211ENST00000465552 GABBR2O75899 941 aa12.66□□□□□ -0.38
CTNNB1-211ENST00000465552 SLC4A10Q6U841 1118 aa12.66□□□□□ -0.38
CTNNB1-211ENST00000465552 ZBTB38Q8NAP3 1195 aaPredicted RBP12.66□□□□□ -0.38
CTNNB1-211ENST00000465552 TAOK3Q9H2K8 898 aa12.66□□□□□ -0.38
CTNNB1-211ENST00000465552 WDR90Q96KV7 1748 aa12.65□□□□□ -0.38
CTNNB1-211ENST00000465552 SCN4AP35499 1836 aa12.65□□□□□ -0.38
CTNNB1-211ENST00000465552 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
CTNNB1-211ENST00000465552 PCCAP05165 728 aaPredicted RBP12.65□□□□□ -0.38
CTNNB1-211ENST00000465552 TRIM28Q13263 835 aaKnown RBP12.65□□□□□ -0.38
CTNNB1-211ENST00000465552 DDX46Q7L014 1031 aaKnown RBP12.65□□□□□ -0.38
CTNNB1-211ENST00000465552 TRMT2AQ8IZ69 625 aaKnown RBP12.65□□□□□ -0.38
CTNNB1-211ENST00000465552 MRPL50Q8N5N7 158 aaKnown RBP12.65□□□□□ -0.38
CTNNB1-211ENST00000465552 SSH1Q8WYL5 1049 aa12.65□□□□□ -0.38
CTNNB1-211ENST00000465552 SMC4Q9NTJ3 1288 aa12.65□□□□□ -0.38
CTNNB1-211ENST00000465552 SCN9AQ15858 1988 aa12.65□□□□□ -0.38
CTNNB1-211ENST00000465552 LMNB1P20700 586 aa12.64□□□□□ -0.39
CTNNB1-211ENST00000465552 HOXA10P31260 410 aaPredicted RBP12.64□□□□□ -0.39
CTNNB1-211ENST00000465552 SOGA3Q5TF21 947 aa12.64□□□□□ -0.39
CTNNB1-211ENST00000465552 UBE3BQ7Z3V4 1068 aa12.64□□□□□ -0.39
CTNNB1-211ENST00000465552 C7orf43Q8WVR3 580 aa12.64□□□□□ -0.39
CTNNB1-211ENST00000465552 CRAMP1Q96RY5 1269 aa12.64□□□□□ -0.39
CTNNB1-211ENST00000465552 GPBP1L1Q9HC44 474 aaPredicted RBP12.64□□□□□ -0.39
CTNNB1-211ENST00000465552 ZNF646O15015 1829 aaPredicted RBP12.64□□□□□ -0.39
CTNNB1-211ENST00000465552 GRAPQ13588 217 aa12.63□□□□□ -0.39
CTNNB1-211ENST00000465552 GRAPLQ8TC17 118 aaPredicted RBP12.63□□□□□ -0.39
CTNNB1-211ENST00000465552 CELF1Q92879 486 aaKnown RBP12.63□□□□□ -0.39
CTNNB1-211ENST00000465552 SEC31BQ9NQW1 1179 aa12.63□□□□□ -0.39
CTNNB1-211ENST00000465552 ZNF277Q9NRM2 450 aaPredicted RBP12.63□□□□□ -0.39
CTNNB1-211ENST00000465552 CDHR2Q9BYE9 1310 aa12.62□□□□□ -0.39
CTNNB1-211ENST00000465552 PDE8AO60658 829 aa12.62□□□□□ -0.39
CTNNB1-211ENST00000465552 FKBP4Q02790 459 aaKnown RBP eCLIP12.62□□□□□ -0.39
CTNNB1-211ENST00000465552 GCKRQ14397 625 aa12.62□□□□□ -0.39
CTNNB1-211ENST00000465552 LINS1Q8NG48 757 aa12.62□□□□□ -0.39
CTNNB1-211ENST00000465552 LTBP3Q9NS15 1303 aa12.62□□□□□ -0.39
CTNNB1-211ENST00000465552 CTSWP56202 376 aa12.61□□□□□ -0.39
CTNNB1-211ENST00000465552 SF3B3Q15393 1217 aaKnown RBP12.61□□□□□ -0.39
CTNNB1-211ENST00000465552 BEND3Q5T5X7 828 aa12.61□□□□□ -0.39
CTNNB1-211ENST00000465552 ZBED9Q6R2W3 1325 aa12.61□□□□□ -0.39
CTNNB1-211ENST00000465552 CD44P16070 742 aaKnown RBP12.6□□□□□ -0.39
CTNNB1-211ENST00000465552 ALDH1L2Q3SY69 923 aa12.6□□□□□ -0.39
CTNNB1-211ENST00000465552 CCDC152Q4G0S7 254 aa12.6□□□□□ -0.39
CTNNB1-211ENST00000465552 RTKN2Q8IZC4 609 aa12.6□□□□□ -0.39
CTNNB1-211ENST00000465552 TMX4Q9H1E5 349 aaPredicted RBP12.6□□□□□ -0.39
CTNNB1-211ENST00000465552 NMRK2Q9NPI5 230 aa12.6□□□□□ -0.39
CTNNB1-211ENST00000465552 ATP6V0A2Q9Y487 856 aa12.6□□□□□ -0.39
CTNNB1-211ENST00000465552 PTPRCP08575 1304 aa12.6□□□□□ -0.39
CTNNB1-211ENST00000465552 H7C1W4 665 aa12.59□□□□□ -0.39
CTNNB1-211ENST00000465552 IARSP41252 1262 aaKnown RBP12.59□□□□□ -0.39
CTNNB1-211ENST00000465552 SRCIN1Q9C0H9 1055 aa12.59□□□□□ -0.39
CTNNB1-211ENST00000465552 GREM2Q9H772 168 aa12.59□□□□□ -0.39
CTNNB1-211ENST00000465552 POLR2AP24928 1970 aaKnown RBP12.59□□□□□ -0.39
CTNNB1-211ENST00000465552 HSP90B1P14625 803 aaKnown RBP12.58□□□□□ -0.4
CTNNB1-211ENST00000465552 CASP7P55210 303 aa12.58□□□□□ -0.4
CTNNB1-211ENST00000465552 AOC3Q16853 763 aa12.58□□□□□ -0.4
CTNNB1-211ENST00000465552 FAM161AQ3B820 660 aa12.58□□□□□ -0.4
CTNNB1-211ENST00000465552 CC2D2BQ6DHV5 1058 aa12.58□□□□□ -0.4
CTNNB1-211ENST00000465552 DPP8Q6V1X1 898 aaPredicted RBP12.58□□□□□ -0.4
CTNNB1-211ENST00000465552 CHMP3Q9Y3E7 222 aa12.58□□□□□ -0.4
CTNNB1-211ENST00000465552 ZNF541Q9H0D2 1346 aa12.58□□□□□ -0.4
CTNNB1-211ENST00000465552 GRM8O00222 908 aa12.57□□□□□ -0.4
CTNNB1-211ENST00000465552 PPIP5K2O43314 1243 aa12.57□□□□□ -0.4
CTNNB1-211ENST00000465552 BBOX1O75936 387 aa12.57□□□□□ -0.4
CTNNB1-211ENST00000465552 CT47B1P0C2W7 299 aaPredicted RBP12.57□□□□□ -0.4
CTNNB1-211ENST00000465552 RARSP54136 660 aaKnown RBP12.57□□□□□ -0.4
CTNNB1-211ENST00000465552 SP8Q8IXZ3 490 aa12.57□□□□□ -0.4
CTNNB1-211ENST00000465552 MPNDQ8N594 471 aa12.57□□□□□ -0.4
CTNNB1-211ENST00000465552 TTLL11Q8NHH1 800 aa12.57□□□□□ -0.4
CTNNB1-211ENST00000465552 GPR101Q96P66 508 aaPredicted RBP12.57□□□□□ -0.4
CTNNB1-211ENST00000465552 PSMD1Q99460 953 aa12.57□□□□□ -0.4
CTNNB1-211ENST00000465552 C9orf78Q9NZ63 289 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms