RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 TRIM5Q9C035 493 aa7.65□□□□□ -1.19
SIK3-207ENST00000465421 LSG1Q9H089 658 aaKnown RBP7.65□□□□□ -1.19
SIK3-207ENST00000465421 HYPKQ9NX55 129 aa7.65□□□□□ -1.19
SIK3-207ENST00000465421 SMC3Q9UQE7 1217 aa7.65□□□□□ -1.19
SIK3-207ENST00000465421 SLU7O95391 586 aaKnown RBP7.64□□□□□ -1.19
SIK3-207ENST00000465421 CCDC93Q567U6 631 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 AEBP1Q8IUX7 1158 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 RTF1Q92541 710 aaKnown RBP7.64□□□□□ -1.19
SIK3-207ENST00000465421 LRRCC1Q9C099 1032 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 RGPD5Q99666 1765 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 NEMFO60524 1076 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 ZRANB2O95218 330 aaKnown RBP eCLIP7.64□□□□□ -1.19
SIK3-207ENST00000465421 ARID5BQ14865 1188 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 PTPN14Q15678 1187 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 CAMK4Q16566 473 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 PRDM16Q9HAZ2 1276 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 MYH15Q9Y2K3 1946 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 LAMB4A4D0S4 1761 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 MRC1P22897 1456 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 GLI3P10071 1580 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 SGSM2O43147 1006 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 CPA1P15085 419 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 MRFAP1L1Q96HT8 127 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 CLSTN2Q9H4D0 955 aa7.64□□□□□ -1.19
SIK3-207ENST00000465421 PAPPAQ13219 1627 aa7.63□□□□□ -1.19
SIK3-207ENST00000465421 PNMA6AP0CW24 399 aaPredicted RBP7.63□□□□□ -1.19
SIK3-207ENST00000465421 CLCN6P51797 869 aa7.63□□□□□ -1.19
SIK3-207ENST00000465421 IQCB1Q15051 598 aa7.63□□□□□ -1.19
SIK3-207ENST00000465421 SULT6B1Q6IMI4 303 aa7.63□□□□□ -1.19
SIK3-207ENST00000465421 CCAR2Q8N163 923 aaKnown RBP7.63□□□□□ -1.19
SIK3-207ENST00000465421 IL1RAPL2Q9NP60 686 aa7.63□□□□□ -1.19
SIK3-207ENST00000465421 MAP3K5Q99683 1374 aa7.63□□□□□ -1.19
SIK3-207ENST00000465421 HSP90AB2PQ58FF8 381 aa7.63□□□□□ -1.19
SIK3-207ENST00000465421 MCM10Q7L590 875 aa7.63□□□□□ -1.19
SIK3-207ENST00000465421 CKAP2LQ8IYA6 745 aa7.63□□□□□ -1.19
SIK3-207ENST00000465421 TRERF1Q96PN7 1200 aa7.63□□□□□ -1.19
SIK3-207ENST00000465421 TNMDQ9H2S6 317 aa7.63□□□□□ -1.19
SIK3-207ENST00000465421 EFCC1Q9HA90 598 aa7.63□□□□□ -1.19
SIK3-207ENST00000465421 HOXC9P31274 260 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 IRX3P78415 501 aaPredicted RBP7.62□□□□□ -1.19
SIK3-207ENST00000465421 LRRN4CLQ8ND94 238 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 GTF3C6Q969F1 213 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 FBXW7Q969H0 707 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 DACT1Q9NYF0 836 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 ABCA3Q99758 1704 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 PNMA6EA0A0J9YXQ4 647 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 NOP2P46087 812 aaKnown RBP7.62□□□□□ -1.19
SIK3-207ENST00000465421 KCNB2Q92953 911 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 ZBTB9Q96C00 473 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 C19orf44Q9H6X5 657 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 DDX19AQ9NUU7 478 aaKnown RBP7.62□□□□□ -1.19
SIK3-207ENST00000465421 C5P01031 1676 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 VPS37CA5D8V6 355 aaPredicted RBP7.62□□□□□ -1.19
SIK3-207ENST00000465421 SKILP12757 684 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 ZNF165P49910 485 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 ERCC6LQ2NKX8 1250 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 FERMT3Q86UX7 667 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 CCDC83Q8IWF9 413 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 EYA1Q99502 592 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 DNAJC25Q9H1X3 360 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 YY1AP1Q9H869 796 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 ATG3Q9NT62 314 aa7.62□□□□□ -1.19
SIK3-207ENST00000465421 ADCY9O60503 1353 aa7.61□□□□□ -1.19
SIK3-207ENST00000465421 CAVIN2O95810 425 aa7.61□□□□□ -1.19
SIK3-207ENST00000465421 GNAI2P04899 355 aa7.61□□□□□ -1.19
SIK3-207ENST00000465421 CCT4P50991 539 aaKnown RBP7.61□□□□□ -1.19
SIK3-207ENST00000465421 KRT85P78386 507 aa7.61□□□□□ -1.19
SIK3-207ENST00000465421 ATP8B2P98198 1209 aa7.61□□□□□ -1.19
SIK3-207ENST00000465421 MTHFSDQ2M296 383 aaKnown RBP7.61□□□□□ -1.19
SIK3-207ENST00000465421 VPS53Q5VIR6 699 aa7.61□□□□□ -1.19
SIK3-207ENST00000465421 PI4K2BQ8TCG2 481 aa7.61□□□□□ -1.19
SIK3-207ENST00000465421 HEG1Q9ULI3 1381 aa7.61□□□□□ -1.19
SIK3-207ENST00000465421 KIF2AO00139 706 aaPredicted RBP7.61□□□□□ -1.19
SIK3-207ENST00000465421 SLC4A2P04920 1241 aa7.61□□□□□ -1.19
SIK3-207ENST00000465421 CDC37L1Q7L3B6 337 aa7.61□□□□□ -1.19
SIK3-207ENST00000465421 ZSCAN31Q96LW9 406 aaPredicted RBP7.61□□□□□ -1.19
SIK3-207ENST00000465421 SH2B1Q9NRF2 756 aaPredicted RBP7.61□□□□□ -1.19
SIK3-207ENST00000465421 UBR2Q8IWV8 1755 aa7.61□□□□□ -1.19
SIK3-207ENST00000465421 NPHP3Q7Z494 1330 aa7.61□□□□□ -1.19
SIK3-207ENST00000465421 NR1I2O75469 434 aa7.61□□□□□ -1.19
SIK3-207ENST00000465421 FAM173BQ6P4H8 233 aa7.61□□□□□ -1.19
SIK3-207ENST00000465421 G2E3Q7L622 706 aa7.61□□□□□ -1.19
SIK3-207ENST00000465421 ZSWIM6Q9HCJ5 1215 aa7.61□□□□□ -1.19
SIK3-207ENST00000465421 CCDC69A6NI79 296 aa7.6□□□□□ -1.19
SIK3-207ENST00000465421 CASTP20810 708 aaKnown RBP7.6□□□□□ -1.19
SIK3-207ENST00000465421 ME3Q16798 604 aa7.6□□□□□ -1.19
SIK3-207ENST00000465421 CADPS2Q86UW7 1296 aa7.6□□□□□ -1.19
SIK3-207ENST00000465421 PROSER2Q86WR7 435 aaPredicted RBP7.6□□□□□ -1.19
SIK3-207ENST00000465421 NUTM1Q86Y26 1132 aa7.6□□□□□ -1.19
SIK3-207ENST00000465421 TXLNBQ8N3L3 684 aa7.6□□□□□ -1.19
SIK3-207ENST00000465421 E4F1Q66K89 784 aaPredicted RBP7.6□□□□□ -1.19
SIK3-207ENST00000465421 SYT10Q6XYQ8 523 aa7.6□□□□□ -1.19
SIK3-207ENST00000465421 CERS3Q8IU89 383 aa7.6□□□□□ -1.19
SIK3-207ENST00000465421 NEK11Q8NG66 645 aa7.6□□□□□ -1.19
SIK3-207ENST00000465421 PGBD1Q96JS3 809 aa7.6□□□□□ -1.19
SIK3-207ENST00000465421 TM6SF1Q9BZW5 370 aa7.6□□□□□ -1.19
SIK3-207ENST00000465421 HOXB7P09629 217 aa7.59□□□□□ -1.19
SIK3-207ENST00000465421 FOSBP53539 338 aa7.59□□□□□ -1.19
SIK3-207ENST00000465421 ADCK5Q3MIX3 580 aa7.59□□□□□ -1.19
SIK3-207ENST00000465421 C11orf57Q6ZUT1 292 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms