RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 THSD7BQ9C0I4 1608 aa18.52■□□□□ 0.55
ATG4B-214ENST00000465399 HOXB7P09629 217 aa18.51■□□□□ 0.55
ATG4B-214ENST00000465399 GRAPQ13588 217 aa18.51■□□□□ 0.55
ATG4B-214ENST00000465399 GRAPLQ8TC17 118 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-214ENST00000465399 ADARB2Q9NS39 739 aaKnown RBP18.51■□□□□ 0.55
ATG4B-214ENST00000465399 GPRC5DQ9NZD1 345 aa18.51■□□□□ 0.55
ATG4B-214ENST00000465399 TRIM35Q9UPQ4 493 aa18.51■□□□□ 0.55
ATG4B-214ENST00000465399 WDR33Q9C0J8 1336 aaKnown RBP18.5■□□□□ 0.55
ATG4B-214ENST00000465399 CXCL9Q07325 125 aa18.5■□□□□ 0.55
ATG4B-214ENST00000465399 KIAA2012Q0VF49 1180 aa18.5■□□□□ 0.55
ATG4B-214ENST00000465399 TMC4Q7Z404 712 aa18.5■□□□□ 0.55
ATG4B-214ENST00000465399 WBP1LQ9NX94 342 aa18.5■□□□□ 0.55
ATG4B-214ENST00000465399 DBF4Q9UBU7 674 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-214ENST00000465399 CIAPIN1Q6FI81 312 aa18.49■□□□□ 0.55
ATG4B-214ENST00000465399 PAXIP1Q6ZW49 1069 aaPredicted RBP18.49■□□□□ 0.55
ATG4B-214ENST00000465399 PLBD2Q8NHP8 589 aa18.49■□□□□ 0.55
ATG4B-214ENST00000465399 DUOX1Q9NRD9 1551 aa18.49■□□□□ 0.55
ATG4B-214ENST00000465399 CDHR2Q9BYE9 1310 aa18.49■□□□□ 0.55
ATG4B-214ENST00000465399 MAP2K1Q02750 393 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-214ENST00000465399 TNIP1Q15025 636 aa18.48■□□□□ 0.55
ATG4B-214ENST00000465399 ANKRD13DQ6ZTN6 518 aa18.48■□□□□ 0.55
ATG4B-214ENST00000465399 BCL2L13Q9BXK5 485 aa18.48■□□□□ 0.55
ATG4B-214ENST00000465399 ADAMTS8Q9UP79 889 aa18.48■□□□□ 0.55
ATG4B-214ENST00000465399 ECE1P42892 770 aa18.47■□□□□ 0.55
ATG4B-214ENST00000465399 GMPSP49915 693 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-214ENST00000465399 CFAP44Q96MT7 982 aa18.47■□□□□ 0.55
ATG4B-214ENST00000465399 HYPKQ9NX55 129 aa18.47■□□□□ 0.55
ATG4B-214ENST00000465399 TRAF5O00463 557 aa18.46■□□□□ 0.55
ATG4B-214ENST00000465399 LBX1P52954 281 aa18.46■□□□□ 0.55
ATG4B-214ENST00000465399 FMR1Q06787 632 aaKnown RBP eCLIP18.46■□□□□ 0.55
ATG4B-214ENST00000465399 ZNF428Q96B54 188 aa18.46■□□□□ 0.55
ATG4B-214ENST00000465399 RAD17O75943 681 aa18.45■□□□□ 0.54
ATG4B-214ENST00000465399 FAM89AQ96GI7 184 aa18.45■□□□□ 0.54
ATG4B-214ENST00000465399 CAPNS2Q96L46 248 aa18.45■□□□□ 0.54
ATG4B-214ENST00000465399 ISCA1Q9BUE6 129 aa18.45■□□□□ 0.54
ATG4B-214ENST00000465399 ATP5J2-PTCD1G3V325 749 aa18.44■□□□□ 0.54
ATG4B-214ENST00000465399 GRM1Q13255 1194 aa18.44■□□□□ 0.54
ATG4B-214ENST00000465399 DUSP27Q5VZP5 1158 aa18.44■□□□□ 0.54
ATG4B-214ENST00000465399 CST9Q5W186 159 aa18.44■□□□□ 0.54
ATG4B-214ENST00000465399 BEGAINQ9BUH8 593 aa18.44■□□□□ 0.54
ATG4B-214ENST00000465399 TLL2Q9Y6L7 1015 aa18.44■□□□□ 0.54
ATG4B-214ENST00000465399 SF3B3Q15393 1217 aaKnown RBP18.43■□□□□ 0.54
ATG4B-214ENST00000465399 WASHC4Q2M389 1173 aa18.43■□□□□ 0.54
ATG4B-214ENST00000465399 CYP4F22Q6NT55 531 aa18.43■□□□□ 0.54
ATG4B-214ENST00000465399 MBIPQ9NS73 344 aa18.43■□□□□ 0.54
ATG4B-214ENST00000465399 NSFL1CQ9UNZ2 370 aaKnown RBP18.43■□□□□ 0.54
ATG4B-214ENST00000465399 YDJCA8MPS7 323 aa18.42■□□□□ 0.54
ATG4B-214ENST00000465399 CELF2O95319 508 aaKnown RBP18.42■□□□□ 0.54
ATG4B-214ENST00000465399 HSPA8P11142 646 aaKnown RBP18.42■□□□□ 0.54
ATG4B-214ENST00000465399 GOLGA2Q08379 1002 aa18.42■□□□□ 0.54
ATG4B-214ENST00000465399 RTL5Q5HYW3 569 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-214ENST00000465399 ZC3H15Q8WU90 426 aaKnown RBP18.42■□□□□ 0.54
ATG4B-214ENST00000465399 CELF1Q92879 486 aaKnown RBP18.42■□□□□ 0.54
ATG4B-214ENST00000465399 GPR101Q96P66 508 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-214ENST00000465399 CNOT7Q9UIV1 285 aaKnown RBP18.42■□□□□ 0.54
ATG4B-214ENST00000465399 POLR2AP24928 1970 aaKnown RBP18.41■□□□□ 0.54
ATG4B-214ENST00000465399 H7C1D1 291 aa18.41■□□□□ 0.54
ATG4B-214ENST00000465399 CALD1Q05682 793 aaKnown RBP18.41■□□□□ 0.54
ATG4B-214ENST00000465399 RIC3Q7Z5B4 369 aa18.41■□□□□ 0.54
ATG4B-214ENST00000465399 PGAP2Q9UHJ9 254 aa18.41■□□□□ 0.54
ATG4B-214ENST00000465399 COL4A1P02462 1669 aa18.41■□□□□ 0.54
ATG4B-214ENST00000465399 C6orf229H3BNL8 230 aa18.4■□□□□ 0.54
ATG4B-214ENST00000465399 IRS4O14654 1257 aaPredicted RBP18.4■□□□□ 0.54
ATG4B-214ENST00000465399 TRIM28Q13263 835 aaKnown RBP18.4■□□□□ 0.54
ATG4B-214ENST00000465399 MICALL2Q8IY33 904 aa18.4■□□□□ 0.54
ATG4B-214ENST00000465399 EYA3Q99504 573 aa18.4■□□□□ 0.54
ATG4B-214ENST00000465399 GLIS2Q9BZE0 524 aaPredicted RBP18.4■□□□□ 0.54
ATG4B-214ENST00000465399 PRKRIP1Q9H875 184 aaPredicted RBP18.4■□□□□ 0.54
ATG4B-214ENST00000465399 IFT57Q9NWB7 429 aa18.4■□□□□ 0.54
ATG4B-214ENST00000465399 ZNF853P0CG23 659 aa18.39■□□□□ 0.53
ATG4B-214ENST00000465399 HSP90B1P14625 803 aaKnown RBP18.39■□□□□ 0.53
ATG4B-214ENST00000465399 HIRAP54198 1017 aaPredicted RBP18.39■□□□□ 0.53
ATG4B-214ENST00000465399 GNAI1P63096 354 aa18.39■□□□□ 0.53
ATG4B-214ENST00000465399 CDC37L1Q7L3B6 337 aa18.39■□□□□ 0.53
ATG4B-214ENST00000465399 SAPCD2Q86UD0 394 aa18.39■□□□□ 0.53
ATG4B-214ENST00000465399 TRPM4Q8TD43 1214 aa18.39■□□□□ 0.53
ATG4B-214ENST00000465399 ZNF408Q9H9D4 720 aa18.39■□□□□ 0.53
ATG4B-214ENST00000465399 DBNDD1Q9H9R9 158 aa18.39■□□□□ 0.53
ATG4B-214ENST00000465399 MYH3P11055 1940 aa18.39■□□□□ 0.53
ATG4B-214ENST00000465399 PSMD14O00487 310 aa18.38■□□□□ 0.53
ATG4B-214ENST00000465399 APAF1O14727 1248 aa18.38■□□□□ 0.53
ATG4B-214ENST00000465399 RIMBP2O15034 1052 aa18.38■□□□□ 0.53
ATG4B-214ENST00000465399 MAP2K2P36507 400 aa18.38■□□□□ 0.53
ATG4B-214ENST00000465399 GPSM2P81274 684 aa18.38■□□□□ 0.53
ATG4B-214ENST00000465399 ZBTB38Q8NAP3 1195 aaPredicted RBP18.38■□□□□ 0.53
ATG4B-214ENST00000465399 DPF2Q92785 391 aa18.38■□□□□ 0.53
ATG4B-214ENST00000465399 HHIPL1Q96JK4 782 aa18.38■□□□□ 0.53
ATG4B-214ENST00000465399 ZBTB12Q9Y330 459 aaPredicted RBP18.38■□□□□ 0.53
ATG4B-214ENST00000465399 SCN9AQ15858 1988 aa18.38■□□□□ 0.53
ATG4B-214ENST00000465399 PSME4Q14997 1843 aa18.37■□□□□ 0.53
ATG4B-214ENST00000465399 ECE2O60344 883 aa18.37■□□□□ 0.53
ATG4B-214ENST00000465399 RPS8P62241 208 aaKnown RBP18.37■□□□□ 0.53
ATG4B-214ENST00000465399 POLLQ9UGP5 575 aa18.37■□□□□ 0.53
ATG4B-214ENST00000465399 SHTN1A0MZ66 631 aa18.36■□□□□ 0.53
ATG4B-214ENST00000465399 ELL2O00472 640 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-214ENST00000465399 AOC2O75106 756 aa18.36■□□□□ 0.53
ATG4B-214ENST00000465399 RPS12P25398 132 aaKnown RBP18.36■□□□□ 0.53
ATG4B-214ENST00000465399 MYD88Q99836 296 aa18.36■□□□□ 0.53
ATG4B-214ENST00000465399 CHMP4AQ9BY43 222 aa18.36■□□□□ 0.53
ATG4B-214ENST00000465399 PHAXQ9H814 394 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms