RNA–Protein interactions for RNA: ENST00000464699.5

KRTCAP3-205, Transcript of keratinocyte associated protein 3, human

TSL 3

Gene KRTCAP3, Length 724 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRTCAP3-205	ENST00000464699	CC2D2B	Q6DHV5	1058 aa		32.21	■■■□□ 2.75
KRTCAP3-205	ENST00000464699		F6X3S4	739 aa		32.2	■■■□□ 2.75
KRTCAP3-205	ENST00000464699	BBOX1	O75936	387 aa		32.19	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	MRPL50	Q8N5N7	158 aa	Known RBP	32.19	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	LINS1	Q8NG48	757 aa		32.19	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.18	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	SSH1	Q8WYL5	1049 aa		32.18	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	PDE8A	O60658	829 aa		32.17	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	GRAP	Q13588	217 aa		32.17	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	GCKR	Q14397	625 aa		32.17	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	GRAPL	Q8TC17	118 aa	Predicted RBP	32.17	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	TMX4	Q9H1E5	349 aa	Predicted RBP	32.17	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	CDHR2	Q9BYE9	1310 aa		32.17	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.17	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	CT47B1	P0C2W7	299 aa	Predicted RBP	32.16	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	KLRG1	Q96E93	195 aa		32.16	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	ATP6V0A2	Q9Y487	856 aa		32.16	■■■□□ 2.74
KRTCAP3-205	ENST00000464699		H7C1W4	665 aa		32.15	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	ALDH1L2	Q3SY69	923 aa		32.15	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	GRIPAP1	Q4V328	841 aa		32.15	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	HTRA3	P83110	453 aa		32.14	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	BEND3	Q5T5X7	828 aa		32.14	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	JMY	Q8N9B5	988 aa		32.14	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	RRAGC	Q9HB90	399 aa		32.14	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	TIAM2	Q8IVF5	1701 aa		32.14	■■■□□ 2.74
KRTCAP3-205	ENST00000464699	MYH3	P11055	1940 aa		32.13	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	UBE3B	Q7Z3V4	1068 aa		32.13	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	SLC51A	Q86UW1	340 aa		32.13	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	SP8	Q8IXZ3	490 aa		32.13	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	SNED1	Q8TER0	1413 aa		32.13	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	BCL2L13	Q9BXK5	485 aa		32.13	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	PSMD1	Q99460	953 aa		32.12	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.12	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	CCDC152	Q4G0S7	254 aa		32.11	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	SLC4A10	Q6U841	1118 aa		32.11	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	CELF1	Q92879	486 aa	Known RBP	32.11	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	TMC4	Q7Z404	712 aa		32.1	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	SMC4	Q9NTJ3	1288 aa		32.1	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	PTPRC	P08575	1304 aa		32.09	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.09	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	SMC1B	Q8NDV3	1235 aa		32.08	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	SEC31B	Q9NQW1	1179 aa		32.08	■■■□□ 2.73
KRTCAP3-205	ENST00000464699	IARS	P41252	1262 aa	Known RBP	32.07	■■■□□ 2.72
KRTCAP3-205	ENST00000464699	CASP7	P55210	303 aa		32.07	■■■□□ 2.72
KRTCAP3-205	ENST00000464699	CTSW	P56202	376 aa		32.07	■■■□□ 2.72
KRTCAP3-205	ENST00000464699	RPS8	P62241	208 aa	Known RBP	32.07	■■■□□ 2.72
KRTCAP3-205	ENST00000464699	TTLL11	Q8NHH1	800 aa		32.06	■■■□□ 2.72
KRTCAP3-205	ENST00000464699	SRCIN1	Q9C0H9	1055 aa		32.06	■■■□□ 2.72
KRTCAP3-205	ENST00000464699	GLTPD2	A6NH11	291 aa		32.05	■■■□□ 2.72
KRTCAP3-205	ENST00000464699	ALDH1L1	O75891	902 aa		32.05	■■■□□ 2.72
KRTCAP3-205	ENST00000464699	MPND	Q8N594	471 aa		32.05	■■■□□ 2.72
KRTCAP3-205	ENST00000464699	PLA2G12B	Q9BX93	195 aa		32.05	■■■□□ 2.72
KRTCAP3-205	ENST00000464699	COL4A1	P02462	1669 aa		32.05	■■■□□ 2.72
KRTCAP3-205	ENST00000464699	DPY19L2	Q6NUT2	758 aa		32.04	■■■□□ 2.72
KRTCAP3-205	ENST00000464699	DPP8	Q6V1X1	898 aa	Predicted RBP	32.03	■■■□□ 2.72
KRTCAP3-205	ENST00000464699	ZBED9	Q6R2W3	1325 aa		32.02	■■■□□ 2.72
KRTCAP3-205	ENST00000464699	C9orf78	Q9NZ63	289 aa	Predicted RBP	32.02	■■■□□ 2.72
KRTCAP3-205	ENST00000464699	LRRC37A	A6NMS7	1700 aa		32.02	■■■□□ 2.72
KRTCAP3-205	ENST00000464699	GRM8	O00222	908 aa		32.01	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	RARS	P54136	660 aa	Known RBP	32.01	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	SUPT20H	Q8NEM7	779 aa		32.01	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	JDP2	Q8WYK2	163 aa		32	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	RTFDC1	Q9BY42	306 aa	Predicted RBP	32	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	GREM2	Q9H772	168 aa		32	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	VEGFA	P15692	232 aa	Predicted RBP	31.99	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	BRPF1	P55201	1214 aa	Predicted RBP	31.99	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	ANKRD18A	Q8IVF6	992 aa		31.99	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	LARGE2	Q8N3Y3	721 aa		31.99	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	CDC5L	Q99459	802 aa	Known RBP	31.99	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	RTL9	Q8NET4	1388 aa		31.98	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	VPS33B	Q9H267	617 aa		31.98	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	NOB1	Q9ULX3	412 aa	Known RBP	31.98	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	NSFL1C	Q9UNZ2	370 aa	Known RBP	31.98	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	PPIP5K2	O43314	1243 aa		31.97	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	CSF1R	P07333	972 aa		31.97	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	COL13A1	Q5TAT6	717 aa	Predicted RBP	31.97	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	FZD9	O00144	591 aa		31.95	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	GPSM2	P81274	684 aa		31.95	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	AOC3	Q16853	763 aa		31.95	■■■□□ 2.71
KRTCAP3-205	ENST00000464699	SPEF2	Q9C093	1822 aa		31.94	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	DDN	O94850	711 aa	Predicted RBP	31.94	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	FOXO4	P98177	505 aa		31.94	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	COL4A5	P29400	1685 aa		31.94	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	FAM161A	Q3B820	660 aa		31.93	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	NIM1K	Q8IY84	436 aa		31.93	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	ITGA6	P23229	1130 aa		31.92	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	API5	Q9BZZ5	524 aa	Known RBP	31.92	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	DUOX1	Q9NRD9	1551 aa		31.92	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	ZNF541	Q9H0D2	1346 aa		31.92	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	PCNT	O95613	3336 aa		31.92	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	POTEC	B2RU33	542 aa		31.91	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	C6orf229	H3BNL8	230 aa		31.91	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	NBPF7	P0C2Y1	421 aa	Predicted RBP	31.91	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	KIAA2012	Q0VF49	1180 aa		31.91	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	EPHA10	Q5JZY3	1008 aa		31.91	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	KIF16B	Q96L93	1317 aa		31.91	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	EIF6	P56537	245 aa	Known RBP	31.9	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	BSDC1	Q9NW68	430 aa	Predicted RBP	31.9	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	ANKIB1	Q9P2G1	1089 aa		31.9	■■■□□ 2.7
KRTCAP3-205	ENST00000464699	POLL	Q9UGP5	575 aa		31.9	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms