RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 HYPKQ9NX55 129 aa4.5□□□□□ -1.69
CCNL1-204ENST00000464316 NRKQ7Z2Y5 1582 aa4.5□□□□□ -1.69
CCNL1-204ENST00000464316 MYO5BQ9ULV0 1848 aa4.5□□□□□ -1.69
CCNL1-204ENST00000464316 CCDC151A5D8V7 595 aa4.5□□□□□ -1.69
CCNL1-204ENST00000464316 SRGAP3O43295 1099 aa4.5□□□□□ -1.69
CCNL1-204ENST00000464316 IFIT2P09913 472 aaKnown RBP4.5□□□□□ -1.69
CCNL1-204ENST00000464316 DNAJC21Q5F1R6 531 aaKnown RBP4.5□□□□□ -1.69
CCNL1-204ENST00000464316 TTLL5Q6EMB2 1281 aa4.5□□□□□ -1.69
CCNL1-204ENST00000464316 PRPF40BQ6NWY9 871 aaKnown RBP4.5□□□□□ -1.69
CCNL1-204ENST00000464316 RBM43Q6ZSC3 357 aaKnown RBP4.5□□□□□ -1.69
CCNL1-204ENST00000464316 NBPF11Q86T75 865 aa4.5□□□□□ -1.69
CCNL1-204ENST00000464316 RPAINQ86UA6 219 aa4.5□□□□□ -1.69
CCNL1-204ENST00000464316 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.5□□□□□ -1.69
CCNL1-204ENST00000464316 CCAR1Q8IX12 1150 aaKnown RBP4.5□□□□□ -1.69
CCNL1-204ENST00000464316 AFAP1Q8N556 730 aa4.5□□□□□ -1.69
CCNL1-204ENST00000464316 CCDC34Q96HJ3 373 aa4.5□□□□□ -1.69
CCNL1-204ENST00000464316 TTC14Q96N46 770 aa4.5□□□□□ -1.69
CCNL1-204ENST00000464316 ZSWIM6Q9HCJ5 1215 aa4.5□□□□□ -1.69
CCNL1-204ENST00000464316 ADAM21Q9UKJ8 722 aa4.5□□□□□ -1.69
CCNL1-204ENST00000464316 CLTCL1P53675 1640 aa4.5□□□□□ -1.69
CCNL1-204ENST00000464316 MYO1BO43795 1136 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 SERPINC1P01008 464 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 BRD2P25440 801 aaKnown RBP4.49□□□□□ -1.69
CCNL1-204ENST00000464316 PLA2G4AP47712 749 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 ME1P48163 572 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 EIF5P55010 431 aaKnown RBP4.49□□□□□ -1.69
CCNL1-204ENST00000464316 OLFM4Q6UX06 510 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 CERS3Q8IU89 383 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 EFCAB13Q8IY85 973 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 CEP112Q8N8E3 955 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 ANKRD20A12PQ8NF67 263 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 PPP1R13BQ96KQ4 1090 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 PHACTR3Q96KR7 559 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 CARD6Q9BX69 1037 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 HMG20BQ9P0W2 317 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 TSPYL4Q9UJ04 414 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 HOOK1Q9UJC3 728 aaKnown RBP4.49□□□□□ -1.69
CCNL1-204ENST00000464316 PNPLA6Q8IY17 1366 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 KIF1CO43896 1103 aaKnown RBP4.49□□□□□ -1.69
CCNL1-204ENST00000464316 ATP6V1AP38606 617 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 GNG11P61952 73 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 CCDC144BQ3MJ40 725 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 MAP9Q49MG5 647 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 CCDC70Q6NSX1 233 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 CCDC144CPQ8IYA2 1237 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 IQUBQ8NA54 791 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 CCDC102AQ96A19 550 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 POLKQ9UBT6 870 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 PLCH2O75038 1416 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 CPSF1Q10570 1443 aaKnown RBP4.49□□□□□ -1.69
CCNL1-204ENST00000464316 A0A1W2PP64 1363 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 MINK1Q8N4C8 1332 aaPredicted RBP4.49□□□□□ -1.69
CCNL1-204ENST00000464316 CHL1O00533 1208 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 TOP1P11387 765 aaKnown RBP4.49□□□□□ -1.69
CCNL1-204ENST00000464316 FAM160A1Q05DH4 1040 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 PSME1Q06323 249 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 AOPEPQ8N6M6 819 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 SMARCE1Q969G3 411 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 EVI5LQ96CN4 794 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 DRC1Q96MC2 740 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 IL1RAPL2Q9NP60 686 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 VPS18Q9P253 973 aa4.49□□□□□ -1.69
CCNL1-204ENST00000464316 CHD2O14647 1828 aaKnown RBP4.49□□□□□ -1.69
CCNL1-204ENST00000464316 MSH6P52701 1360 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 A0A087WUV0 522 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-204ENST00000464316 CCDC196A0A1B0GTZ2 297 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 A6NNZ2 444 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 ARHGAP6O43182 974 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 NR1I2O75469 434 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 ZRANB2O95218 330 aaKnown RBP eCLIP4.48□□□□□ -1.691e-6■■□□□ 13.2
CCNL1-204ENST00000464316 MAP2K2P36507 400 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 MNAT1P51948 309 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 CCZ1BP86790 482 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 CCZ1P86791 482 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-204ENST00000464316 PPP2R3AQ06190 1150 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 TUBB8Q3ZCM7 444 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 TSHZ3Q63HK5 1081 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 CC2D1AQ6P1N0 951 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-204ENST00000464316 NECAB1Q8N987 351 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 FSIP1Q8NA03 581 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 BANK1Q8NDB2 785 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 GIMAP7Q8NHV1 300 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 CTCFLQ8NI51 663 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-204ENST00000464316 FMNL2Q96PY5 1086 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 LARP6Q9BRS8 491 aaKnown RBP4.48□□□□□ -1.69
CCNL1-204ENST00000464316 TACO1Q9BSH4 297 aaKnown RBP4.48□□□□□ -1.69
CCNL1-204ENST00000464316 MED4Q9NPJ6 270 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 ST7Q9NRC1 585 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 TOMM22Q9NS69 142 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 SPG7Q9UQ90 795 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 SOS1Q07889 1333 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-204ENST00000464316 H0YHG0 523 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 KIF5CO60282 957 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 NOP2P46087 812 aaKnown RBP4.48□□□□□ -1.69
CCNL1-204ENST00000464316 MCM6Q14566 821 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 IQCB1Q15051 598 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 CFAP100Q494V2 611 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 MCTP2Q6DN12 878 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 SYNE3Q6ZMZ3 975 aa4.48□□□□□ -1.69
CCNL1-204ENST00000464316 MMS22LQ6ZRQ5 1243 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms