RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 DDX60Q8IY21 1712 aaKnown RBP33.16■■■□□ 2.9
SURF1-203ENST00000463965 ALDH1L1O75891 902 aa33.16■■■□□ 2.9
SURF1-203ENST00000463965 BRPF1P55201 1214 aaPredicted RBP33.15■■■□□ 2.9
SURF1-203ENST00000463965 LAMB2P55268 1798 aa33.15■■■□□ 2.9
SURF1-203ENST00000463965 TMC4Q7Z404 712 aa33.15■■■□□ 2.9
SURF1-203ENST00000463965 ZNF784Q8NCA9 323 aaPredicted RBP33.13■■■□□ 2.89
SURF1-203ENST00000463965 C9orf78Q9NZ63 289 aaPredicted RBP33.13■■■□□ 2.89
SURF1-203ENST00000463965 ATP6V0A2Q9Y487 856 aa33.13■■■□□ 2.89
SURF1-203ENST00000463965 CTSWP56202 376 aa33.12■■■□□ 2.89
SURF1-203ENST00000463965 FKBP4Q02790 459 aaKnown RBP eCLIP33.12■■■□□ 2.89
SURF1-203ENST00000463965 OLFM4Q6UX06 510 aa33.12■■■□□ 2.89
SURF1-203ENST00000463965 NOB1Q9ULX3 412 aaKnown RBP33.12■■■□□ 2.89
SURF1-203ENST00000463965 KIF16BQ96L93 1317 aa33.11■■■□□ 2.89
SURF1-203ENST00000463965 SP8Q8IXZ3 490 aa33.11■■■□□ 2.89
SURF1-203ENST00000463965 FER1L6Q2WGJ9 1857 aa33.1■■■□□ 2.89
SURF1-203ENST00000463965 PLA2G12BQ9BX93 195 aa33.1■■■□□ 2.89
SURF1-203ENST00000463965 API5Q9BZZ5 524 aaKnown RBP33.1■■■□□ 2.89
SURF1-203ENST00000463965 GRM8O00222 908 aa33.09■■■□□ 2.89
SURF1-203ENST00000463965 CASP7P55210 303 aa33.08■■■□□ 2.89
SURF1-203ENST00000463965 RPS8P62241 208 aaKnown RBP33.08■■■□□ 2.89
SURF1-203ENST00000463965 CCDC85AQ96PX6 553 aaPredicted RBP33.08■■■□□ 2.89
SURF1-203ENST00000463965 PSMD1Q99460 953 aa33.08■■■□□ 2.89
SURF1-203ENST00000463965 SBF1O95248 1867 aa33.08■■■□□ 2.89
SURF1-203ENST00000463965 ZC3H4Q9UPT8 1303 aaKnown RBP33.07■■■□□ 2.88
SURF1-203ENST00000463965 IPO8O15397 1037 aaKnown RBP33.07■■■□□ 2.88
SURF1-203ENST00000463965 TTLL11Q8NHH1 800 aa33.07■■■□□ 2.88
SURF1-203ENST00000463965 CELF1Q92879 486 aaKnown RBP33.07■■■□□ 2.88
SURF1-203ENST00000463965 PRELPP51888 382 aa33.06■■■□□ 2.88
SURF1-203ENST00000463965 ARHGAP45Q92619 1136 aa33.05■■■□□ 2.88
SURF1-203ENST00000463965 CDC5LQ99459 802 aaKnown RBP33.05■■■□□ 2.88
SURF1-203ENST00000463965 SEC31BQ9NQW1 1179 aa33.05■■■□□ 2.88
SURF1-203ENST00000463965 ZNF277Q9NRM2 450 aaPredicted RBP33.04■■■□□ 2.88
SURF1-203ENST00000463965 CCT4P50991 539 aaKnown RBP33.03■■■□□ 2.88
SURF1-203ENST00000463965 DPP8Q6V1X1 898 aaPredicted RBP33.03■■■□□ 2.88
SURF1-203ENST00000463965 ANKRD18AQ8IVF6 992 aa33.03■■■□□ 2.88
SURF1-203ENST00000463965 MPNDQ8N594 471 aa33.03■■■□□ 2.88
SURF1-203ENST00000463965 SUPT20HQ8NEM7 779 aa33.03■■■□□ 2.88
SURF1-203ENST00000463965 ZNF526Q8TF50 670 aaPredicted RBP33.02■■■□□ 2.88
SURF1-203ENST00000463965 GPBP1L1Q9HC44 474 aaPredicted RBP33.02■■■□□ 2.88
SURF1-203ENST00000463965 RTL9Q8NET4 1388 aa33.01■■■□□ 2.88
SURF1-203ENST00000463965 IARSP41252 1262 aaKnown RBP33.01■■■□□ 2.87
SURF1-203ENST00000463965 GREM2Q9H772 168 aa33.01■■■□□ 2.87
SURF1-203ENST00000463965 BCAR3O75815 825 aa33■■■□□ 2.87
SURF1-203ENST00000463965 SNED1Q8TER0 1413 aa33■■■□□ 2.87
SURF1-203ENST00000463965 CCDC88AQ3V6T2 1871 aa32.99■■■□□ 2.87
SURF1-203ENST00000463965 MYH3P11055 1940 aa32.99■■■□□ 2.87
SURF1-203ENST00000463965 CSF1RP07333 972 aa32.99■■■□□ 2.87
SURF1-203ENST00000463965 FRAT1Q92837 279 aaPredicted RBP32.99■■■□□ 2.87
SURF1-203ENST00000463965 TAF1P21675 1872 aa32.99■■■□□ 2.87
SURF1-203ENST00000463965 KDM2BQ8NHM5 1336 aa32.98■■■□□ 2.87
SURF1-203ENST00000463965 DPY19L2Q6NUT2 758 aa32.97■■■□□ 2.87
SURF1-203ENST00000463965 JDP2Q8WYK2 163 aa32.97■■■□□ 2.87
SURF1-203ENST00000463965 VPS33BQ9H267 617 aa32.97■■■□□ 2.87
SURF1-203ENST00000463965 CHMP3Q9Y3E7 222 aa32.97■■■□□ 2.87
SURF1-203ENST00000463965 UTYO14607 1347 aa32.97■■■□□ 2.87
SURF1-203ENST00000463965 ITGA6P23229 1130 aa32.96■■■□□ 2.87
SURF1-203ENST00000463965 IGHMBP2P38935 993 aaKnown RBP32.96■■■□□ 2.87
SURF1-203ENST00000463965 FOXO4P98177 505 aa32.96■■■□□ 2.87
SURF1-203ENST00000463965 SLC51AQ86UW1 340 aa32.96■■■□□ 2.87
SURF1-203ENST00000463965 RTFDC1Q9BY42 306 aaPredicted RBP32.96■■■□□ 2.87
SURF1-203ENST00000463965 NSFL1CQ9UNZ2 370 aaKnown RBP32.96■■■□□ 2.87
SURF1-203ENST00000463965 NBPF7P0C2Y1 421 aaPredicted RBP32.95■■■□□ 2.87
SURF1-203ENST00000463965 FAM161AQ3B820 660 aa32.95■■■□□ 2.87
SURF1-203ENST00000463965 LARGE2Q8N3Y3 721 aa32.95■■■□□ 2.87
SURF1-203ENST00000463965 ANKRD18BA2A2Z9 1011 aa32.94■■■□□ 2.86
SURF1-203ENST00000463965 LMBR1LQ6UX01 489 aa32.94■■■□□ 2.86
SURF1-203ENST00000463965 ATF7IPQ6VMQ6 1270 aa32.94■■■□□ 2.86
SURF1-203ENST00000463965 DICER1Q9UPY3 1922 aaKnown RBP32.93■■■□□ 2.86
SURF1-203ENST00000463965 PPIP5K2O43314 1243 aa32.93■■■□□ 2.86
SURF1-203ENST00000463965 IFIT5Q13325 482 aaKnown RBP32.93■■■□□ 2.86
SURF1-203ENST00000463965 ZKSCAN2Q63HK3 967 aa32.93■■■□□ 2.86
SURF1-203ENST00000463965 USP44Q9H0E7 712 aa32.93■■■□□ 2.86
SURF1-203ENST00000463965 BSDC1Q9NW68 430 aaPredicted RBP32.93■■■□□ 2.86
SURF1-203ENST00000463965 GLTPD2A6NH11 291 aa32.92■■■□□ 2.86
SURF1-203ENST00000463965 SUCLG2Q96I99 432 aa32.92■■■□□ 2.86
SURF1-203ENST00000463965 MPHOSPH8Q99549 860 aa32.92■■■□□ 2.86
SURF1-203ENST00000463965 ANKIB1Q9P2G1 1089 aa32.92■■■□□ 2.86
SURF1-203ENST00000463965 GPSM2P81274 684 aa32.91■■■□□ 2.86
SURF1-203ENST00000463965 CCDC57Q2TAC2 916 aa32.91■■■□□ 2.86
SURF1-203ENST00000463965 HDAC5Q9UQL6 1122 aa32.91■■■□□ 2.86
SURF1-203ENST00000463965 C6orf229H3BNL8 230 aa32.9■■■□□ 2.86
SURF1-203ENST00000463965 TRIM27P14373 513 aa32.9■■■□□ 2.86
SURF1-203ENST00000463965 EPHA10Q5JZY3 1008 aa32.9■■■□□ 2.86
SURF1-203ENST00000463965 TIAM2Q8IVF5 1701 aa32.89■■■□□ 2.86
SURF1-203ENST00000463965 TAF7LQ5H9L4 462 aa32.89■■■□□ 2.86
SURF1-203ENST00000463965 NIM1KQ8IY84 436 aa32.89■■■□□ 2.86
SURF1-203ENST00000463965 LRRC37AA6NMS7 1700 aa32.88■■■□□ 2.85
SURF1-203ENST00000463965 AOC3Q16853 763 aa32.88■■■□□ 2.85
SURF1-203ENST00000463965 INTS3Q68E01 1043 aaKnown RBP32.88■■■□□ 2.85
SURF1-203ENST00000463965 EYA3Q99504 573 aa32.88■■■□□ 2.85
SURF1-203ENST00000463965 PODXL2Q9NZ53 605 aa32.88■■■□□ 2.85
SURF1-203ENST00000463965 UBTFL1P0CB47 393 aaPredicted RBP32.87■■■□□ 2.85
SURF1-203ENST00000463965 GGA1Q9UJY5 639 aa32.87■■■□□ 2.85
SURF1-203ENST00000463965 COL4A1P02462 1669 aa32.87■■■□□ 2.85
SURF1-203ENST00000463965 XDHP47989 1333 aa32.86■■■□□ 2.85
SURF1-203ENST00000463965 EIF6P56537 245 aaKnown RBP32.86■■■□□ 2.85
SURF1-203ENST00000463965 KIAA2012Q0VF49 1180 aa32.86■■■□□ 2.85
SURF1-203ENST00000463965 WASHC4Q2M389 1173 aa32.86■■■□□ 2.85
SURF1-203ENST00000463965 BICC1Q9H694 974 aaKnown RBP32.86■■■□□ 2.85
SURF1-203ENST00000463965 FZD9O00144 591 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms