RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 PLIN1O60240 522 aa23.92■■□□□ 1.42
LMNB1-204ENST00000463908 RLBP1P12271 317 aa23.92■■□□□ 1.42
LMNB1-204ENST00000463908 HSP90B1P14625 803 aaKnown RBP23.92■■□□□ 1.42
LMNB1-204ENST00000463908 FOXO4P98177 505 aa23.92■■□□□ 1.42
LMNB1-204ENST00000463908 EPHA10Q5JZY3 1008 aa23.92■■□□□ 1.42
LMNB1-204ENST00000463908 PRPF40BQ6NWY9 871 aaKnown RBP23.92■■□□□ 1.42
LMNB1-204ENST00000463908 TTLL11Q8NHH1 800 aa23.92■■□□□ 1.42
LMNB1-204ENST00000463908 C7orf43Q8WVR3 580 aa23.92■■□□□ 1.42
LMNB1-204ENST00000463908 TMEM57Q8N5G2 664 aa23.91■■□□□ 1.42
LMNB1-204ENST00000463908 LAMB2P55268 1798 aa23.91■■□□□ 1.42
LMNB1-204ENST00000463908 CSF1RP07333 972 aa23.9■■□□□ 1.42
LMNB1-204ENST00000463908 CTSWP56202 376 aa23.9■■□□□ 1.42
LMNB1-204ENST00000463908 DZIP1LQ8IYY4 767 aaKnown RBP23.9■■□□□ 1.42
LMNB1-204ENST00000463908 SUCLG2Q96I99 432 aa23.9■■□□□ 1.42
LMNB1-204ENST00000463908 CCDC85AQ96PX6 553 aaPredicted RBP23.9■■□□□ 1.42
LMNB1-204ENST00000463908 CEP350Q5VT06 3117 aa23.89■■□□□ 1.42
LMNB1-204ENST00000463908 DDX46Q7L014 1031 aaKnown RBP23.89■■□□□ 1.41
LMNB1-204ENST00000463908 SEC31BQ9NQW1 1179 aa23.89■■□□□ 1.41
LMNB1-204ENST00000463908 ZNF219Q9P2Y4 722 aaPredicted RBP23.89■■□□□ 1.41
LMNB1-204ENST00000463908 C21orf2O43822 256 aa23.88■■□□□ 1.41
LMNB1-204ENST00000463908 OLFM4Q6UX06 510 aa23.88■■□□□ 1.41
LMNB1-204ENST00000463908 SLC51AQ86UW1 340 aa23.88■■□□□ 1.41
LMNB1-204ENST00000463908 SLX4Q8IY92 1834 aa23.88■■□□□ 1.41
LMNB1-204ENST00000463908 GRIN3BO60391 1043 aa23.87■■□□□ 1.41
LMNB1-204ENST00000463908 CCDC152Q4G0S7 254 aa23.87■■□□□ 1.41
LMNB1-204ENST00000463908 PANK1Q8TE04 598 aa23.87■■□□□ 1.41
LMNB1-204ENST00000463908 CELF1Q92879 486 aaKnown RBP23.87■■□□□ 1.41
LMNB1-204ENST00000463908 GREM2Q9H772 168 aa23.87■■□□□ 1.41
LMNB1-204ENST00000463908 GRAPQ13588 217 aa23.86■■□□□ 1.41
LMNB1-204ENST00000463908 GRAPLQ8TC17 118 aaPredicted RBP23.86■■□□□ 1.41
LMNB1-204ENST00000463908 MEIS3Q99687 375 aa23.86■■□□□ 1.41
LMNB1-204ENST00000463908 COL4A1P02462 1669 aa23.86■■□□□ 1.41
LMNB1-204ENST00000463908 BBOX1O75936 387 aa23.85■■□□□ 1.41
LMNB1-204ENST00000463908 LMBR1LQ6UX01 489 aa23.84■■□□□ 1.41
LMNB1-204ENST00000463908 ARHGAP27Q6ZUM4 889 aa23.84■■□□□ 1.41
LMNB1-204ENST00000463908 FTSJ3Q8IY81 847 aaKnown RBP23.84■■□□□ 1.41
LMNB1-204ENST00000463908 RTL9Q8NET4 1388 aa23.83■■□□□ 1.41
LMNB1-204ENST00000463908 PPEF1O14829 653 aaPredicted RBP23.83■■□□□ 1.41
LMNB1-204ENST00000463908 RPS8P62241 208 aaKnown RBP23.83■■□□□ 1.41
LMNB1-204ENST00000463908 C20orf194Q5TEA3 1177 aa23.83■■□□□ 1.41
LMNB1-204ENST00000463908 ANKRD44Q8N8A2 993 aa23.83■■□□□ 1.41
LMNB1-204ENST00000463908 BICC1Q9H694 974 aaKnown RBP23.83■■□□□ 1.41
LMNB1-204ENST00000463908 TAF1P21675 1872 aa23.83■■□□□ 1.4
LMNB1-204ENST00000463908 FAM161AQ3B820 660 aa23.82■■□□□ 1.4
LMNB1-204ENST00000463908 RABL6Q3YEC7 729 aaPredicted RBP23.82■■□□□ 1.4
LMNB1-204ENST00000463908 ATP6V0A2Q9Y487 856 aa23.82■■□□□ 1.4
LMNB1-204ENST00000463908 ARFGEF1Q9Y6D6 1849 aa23.82■■□□□ 1.4
LMNB1-204ENST00000463908 ZBTB7BO15156 539 aaPredicted RBP23.81■■□□□ 1.4
LMNB1-204ENST00000463908 UBTFL1P0CB47 393 aaPredicted RBP23.81■■□□□ 1.4
LMNB1-204ENST00000463908 SP8Q8IXZ3 490 aa23.81■■□□□ 1.4
LMNB1-204ENST00000463908 MS4A1P11836 297 aa23.8■■□□□ 1.4
LMNB1-204ENST00000463908 ITGA6P23229 1130 aa23.8■■□□□ 1.4
LMNB1-204ENST00000463908 NFKBIEO00221 500 aa23.79■■□□□ 1.4
LMNB1-204ENST00000463908 GNAI3P08754 354 aa23.79■■□□□ 1.4
LMNB1-204ENST00000463908 ITPRIPQ8IWB1 547 aa23.79■■□□□ 1.4
LMNB1-204ENST00000463908 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.79■■□□□ 1.4
LMNB1-204ENST00000463908 LRRFIP2Q9Y608 721 aaKnown RBP23.79■■□□□ 1.4
LMNB1-204ENST00000463908 CACNA1SQ13698 1873 aa23.79■■□□□ 1.4
LMNB1-204ENST00000463908 SNED1Q8TER0 1413 aa23.78■■□□□ 1.4
LMNB1-204ENST00000463908 PRELPP51888 382 aa23.78■■□□□ 1.4
LMNB1-204ENST00000463908 PDE3AQ14432 1141 aa23.78■■□□□ 1.4
LMNB1-204ENST00000463908 CC2D2BQ6DHV5 1058 aa23.78■■□□□ 1.4
LMNB1-204ENST00000463908 COG6Q9Y2V7 657 aa23.78■■□□□ 1.4
LMNB1-204ENST00000463908 CCDC93Q567U6 631 aa23.77■■□□□ 1.4
LMNB1-204ENST00000463908 SOGA3Q5TF21 947 aa23.77■■□□□ 1.4
LMNB1-204ENST00000463908 TMC4Q7Z404 712 aa23.77■■□□□ 1.4
LMNB1-204ENST00000463908 ANKRD18AQ8IVF6 992 aa23.77■■□□□ 1.4
LMNB1-204ENST00000463908 CDC5LQ99459 802 aaKnown RBP23.77■■□□□ 1.4
LMNB1-204ENST00000463908 CHMP3Q9Y3E7 222 aa23.77■■□□□ 1.4
LMNB1-204ENST00000463908 MYH3P11055 1940 aa23.76■■□□□ 1.39
LMNB1-204ENST00000463908 ANKRD18BA2A2Z9 1011 aa23.76■■□□□ 1.39
LMNB1-204ENST00000463908 RRP1P56182 461 aaKnown RBP23.76■■□□□ 1.39
LMNB1-204ENST00000463908 RASSF7Q02833 373 aa23.76■■□□□ 1.39
LMNB1-204ENST00000463908 IFIT5Q13325 482 aaKnown RBP23.76■■□□□ 1.39
LMNB1-204ENST00000463908 RTKN2Q8IZC4 609 aa23.76■■□□□ 1.39
LMNB1-204ENST00000463908 ZNF594Q96JF6 807 aaPredicted RBP23.76■■□□□ 1.39
LMNB1-204ENST00000463908 MVPQ14764 893 aaKnown RBP23.75■■□□□ 1.39
LMNB1-204ENST00000463908 BSDC1Q9NW68 430 aaPredicted RBP23.75■■□□□ 1.39
LMNB1-204ENST00000463908 CCDC57Q2TAC2 916 aa23.74■■□□□ 1.39
LMNB1-204ENST00000463908 HDAC5Q9UQL6 1122 aa23.74■■□□□ 1.39
LMNB1-204ENST00000463908 GNAI2P04899 355 aa23.73■■□□□ 1.39
LMNB1-204ENST00000463908 RFX5P48382 616 aaPredicted RBP23.73■■□□□ 1.39
LMNB1-204ENST00000463908 IGHMBP2P38935 993 aaKnown RBP23.72■■□□□ 1.39
LMNB1-204ENST00000463908 GPSM2P81274 684 aa23.72■■□□□ 1.39
LMNB1-204ENST00000463908 FKBP4Q02790 459 aaKnown RBP eCLIP23.72■■□□□ 1.39
LMNB1-204ENST00000463908 GRIPAP1Q4V328 841 aa23.72■■□□□ 1.39
LMNB1-204ENST00000463908 TAOK3Q9H2K8 898 aa23.72■■□□□ 1.39
LMNB1-204ENST00000463908 MINPP1Q9UNW1 487 aa23.72■■□□□ 1.39
LMNB1-204ENST00000463908 LTBP3Q9NS15 1303 aa23.72■■□□□ 1.39
LMNB1-204ENST00000463908 FER1L6Q2WGJ9 1857 aa23.71■■□□□ 1.39
LMNB1-204ENST00000463908 MPNDQ8N594 471 aa23.71■■□□□ 1.39
LMNB1-204ENST00000463908 PSMD1Q99460 953 aa23.71■■□□□ 1.39
LMNB1-204ENST00000463908 NSFL1CQ9UNZ2 370 aaKnown RBP23.71■■□□□ 1.39
LMNB1-204ENST00000463908 KLHDC4Q8TBB5 520 aa23.7■■□□□ 1.38
LMNB1-204ENST00000463908 MPHOSPH8Q99549 860 aa23.7■■□□□ 1.38
LMNB1-204ENST00000463908 RTFDC1Q9BY42 306 aaPredicted RBP23.7■■□□□ 1.38
LMNB1-204ENST00000463908 PUS3Q9BZE2 481 aaKnown RBP23.7■■□□□ 1.38
LMNB1-204ENST00000463908 TMX4Q9H1E5 349 aaPredicted RBP23.7■■□□□ 1.38
LMNB1-204ENST00000463908 C1orf115Q9H7X2 142 aa23.7■■□□□ 1.38
LMNB1-204ENST00000463908 DDX19BQ9UMR2 479 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms