RNA–Protein interactions for RNA: ENST00000462625.1

LIMK2-206, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 1,042 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-206ENST00000462625 CDHR2Q9BYE9 1310 aa29.5■■■□□ 2.31
LIMK2-206ENST00000462625 ZNF277Q9NRM2 450 aaPredicted RBP29.5■■■□□ 2.31
LIMK2-206ENST00000462625 GLTPD2A6NH11 291 aa29.49■■■□□ 2.31
LIMK2-206ENST00000462625 CCDC152Q4G0S7 254 aa29.49■■■□□ 2.31
LIMK2-206ENST00000462625 SP8Q8IXZ3 490 aa29.49■■■□□ 2.31
LIMK2-206ENST00000462625 TRMT2AQ8IZ69 625 aaKnown RBP29.49■■■□□ 2.31
LIMK2-206ENST00000462625 IARSP41252 1262 aaKnown RBP29.48■■■□□ 2.31
LIMK2-206ENST00000462625 JARID2Q92833 1246 aaPredicted RBP29.48■■■□□ 2.31
LIMK2-206ENST00000462625 GCKRQ14397 625 aa29.47■■■□□ 2.31
LIMK2-206ENST00000462625 SNED1Q8TER0 1413 aa29.46■■■□□ 2.31
LIMK2-206ENST00000462625 C1QTNF8P60827 252 aa29.46■■■□□ 2.31
LIMK2-206ENST00000462625 SUPT20HQ8NEM7 779 aa29.46■■■□□ 2.31
LIMK2-206ENST00000462625 F6X3S4 739 aa29.45■■■□□ 2.31
LIMK2-206ENST00000462625 CT47B1P0C2W7 299 aaPredicted RBP29.45■■■□□ 2.31
LIMK2-206ENST00000462625 JDP2Q8WYK2 163 aa29.45■■■□□ 2.31
LIMK2-206ENST00000462625 NMRK2Q9NPI5 230 aa29.45■■■□□ 2.31
LIMK2-206ENST00000462625 H7C1W4 665 aa29.44■■■□□ 2.3
LIMK2-206ENST00000462625 KIF3CO14782 793 aa29.44■■■□□ 2.3
LIMK2-206ENST00000462625 DPP8Q6V1X1 898 aaPredicted RBP29.44■■■□□ 2.3
LIMK2-206ENST00000462625 UBE3BQ7Z3V4 1068 aa29.44■■■□□ 2.3
LIMK2-206ENST00000462625 C16orf71Q8IYS4 520 aaPredicted RBP29.44■■■□□ 2.3
LIMK2-206ENST00000462625 MPNDQ8N594 471 aa29.44■■■□□ 2.3
LIMK2-206ENST00000462625 ALDH1L2Q3SY69 923 aa29.43■■■□□ 2.3
LIMK2-206ENST00000462625 MRPL50Q8N5N7 158 aaKnown RBP29.43■■■□□ 2.3
LIMK2-206ENST00000462625 VPS33BQ9H267 617 aa29.43■■■□□ 2.3
LIMK2-206ENST00000462625 RRAGCQ9HB90 399 aa29.43■■■□□ 2.3
LIMK2-206ENST00000462625 CTSWP56202 376 aa29.42■■■□□ 2.3
LIMK2-206ENST00000462625 RPS8P62241 208 aaKnown RBP29.42■■■□□ 2.3
LIMK2-206ENST00000462625 HNRNPUQ00839 825 aaKnown RBP eCLIP29.42■■■□□ 2.3
LIMK2-206ENST00000462625 CELF1Q92879 486 aaKnown RBP29.42■■■□□ 2.3
LIMK2-206ENST00000462625 LRRC37AA6NMS7 1700 aa29.41■■■□□ 2.3
LIMK2-206ENST00000462625 BEND3Q5T5X7 828 aa29.41■■■□□ 2.3
LIMK2-206ENST00000462625 SLC4A10Q6U841 1118 aa29.41■■■□□ 2.3
LIMK2-206ENST00000462625 SSH1Q8WYL5 1049 aa29.41■■■□□ 2.3
LIMK2-206ENST00000462625 PTPRCP08575 1304 aa29.41■■■□□ 2.3
LIMK2-206ENST00000462625 LARGE2Q8N3Y3 721 aa29.4■■■□□ 2.3
LIMK2-206ENST00000462625 VEGFAP15692 232 aaPredicted RBP29.39■■■□□ 2.3
LIMK2-206ENST00000462625 RTFDC1Q9BY42 306 aaPredicted RBP29.39■■■□□ 2.3
LIMK2-206ENST00000462625 TOMM70O94826 608 aa29.38■■■□□ 2.29
LIMK2-206ENST00000462625 CCDC85AQ96PX6 553 aaPredicted RBP29.38■■■□□ 2.29
LIMK2-206ENST00000462625 SEC31BQ9NQW1 1179 aa29.38■■■□□ 2.29
LIMK2-206ENST00000462625 SMC4Q9NTJ3 1288 aa29.38■■■□□ 2.29
LIMK2-206ENST00000462625 WDR90Q96KV7 1748 aa29.37■■■□□ 2.29
LIMK2-206ENST00000462625 PPIP5K2O43314 1243 aa29.37■■■□□ 2.29
LIMK2-206ENST00000462625 ALDH1L1O75891 902 aa29.37■■■□□ 2.29
LIMK2-206ENST00000462625 SLC51AQ86UW1 340 aa29.37■■■□□ 2.29
LIMK2-206ENST00000462625 ANKRD18AQ8IVF6 992 aa29.37■■■□□ 2.29
LIMK2-206ENST00000462625 TTLL11Q8NHH1 800 aa29.37■■■□□ 2.29
LIMK2-206ENST00000462625 CDC5LQ99459 802 aaKnown RBP29.37■■■□□ 2.29
LIMK2-206ENST00000462625 SRCIN1Q9C0H9 1055 aa29.37■■■□□ 2.29
LIMK2-206ENST00000462625 PLA2G12BQ9BX93 195 aa29.36■■■□□ 2.29
LIMK2-206ENST00000462625 BCL2L13Q9BXK5 485 aa29.36■■■□□ 2.29
LIMK2-206ENST00000462625 NSFL1CQ9UNZ2 370 aaKnown RBP29.36■■■□□ 2.29
LIMK2-206ENST00000462625 FZD9O00144 591 aa29.35■■■□□ 2.29
LIMK2-206ENST00000462625 DDNO94850 711 aaPredicted RBP29.35■■■□□ 2.29
LIMK2-206ENST00000462625 EIF6P56537 245 aaKnown RBP29.35■■■□□ 2.29
LIMK2-206ENST00000462625 NIM1KQ8IY84 436 aa29.35■■■□□ 2.29
LIMK2-206ENST00000462625 C9orf78Q9NZ63 289 aaPredicted RBP29.35■■■□□ 2.29
LIMK2-206ENST00000462625 CASP7P55210 303 aa29.34■■■□□ 2.29
LIMK2-206ENST00000462625 GRM8O00222 908 aa29.33■■■□□ 2.29
LIMK2-206ENST00000462625 AOC3Q16853 763 aa29.33■■■□□ 2.29
LIMK2-206ENST00000462625 RTL9Q8NET4 1388 aa29.33■■■□□ 2.29
LIMK2-206ENST00000462625 SCN4AP35499 1836 aa29.32■■■□□ 2.28
LIMK2-206ENST00000462625 SPEF2Q9C093 1822 aa29.32■■■□□ 2.28
LIMK2-206ENST00000462625 GREM2Q9H772 168 aa29.32■■■□□ 2.28
LIMK2-206ENST00000462625 RBM46Q8TBY0 533 aaKnown RBP29.31■■■□□ 2.28
LIMK2-206ENST00000462625 COL4A1P02462 1669 aa29.31■■■□□ 2.28
LIMK2-206ENST00000462625 ZNF541Q9H0D2 1346 aa29.3■■■□□ 2.28
LIMK2-206ENST00000462625 IQCA1LA6NCM1 817 aa29.3■■■□□ 2.28
LIMK2-206ENST00000462625 C6orf229H3BNL8 230 aa29.3■■■□□ 2.28
LIMK2-206ENST00000462625 GPSM2P81274 684 aa29.3■■■□□ 2.28
LIMK2-206ENST00000462625 KIAA2012Q0VF49 1180 aa29.3■■■□□ 2.28
LIMK2-206ENST00000462625 GPC2Q8N158 579 aa29.3■■■□□ 2.28
LIMK2-206ENST00000462625 EYA3Q99504 573 aa29.3■■■□□ 2.28
LIMK2-206ENST00000462625 ANKIB1Q9P2G1 1089 aa29.3■■■□□ 2.28
LIMK2-206ENST00000462625 CSF1RP07333 972 aa29.29■■■□□ 2.28
LIMK2-206ENST00000462625 IGHMBP2P38935 993 aaKnown RBP29.28■■■□□ 2.28
LIMK2-206ENST00000462625 WASHC4Q2M389 1173 aa29.28■■■□□ 2.28
LIMK2-206ENST00000462625 L3MBTL3Q96JM7 780 aaPredicted RBP29.28■■■□□ 2.28
LIMK2-206ENST00000462625 PODXL2Q9NZ53 605 aa29.28■■■□□ 2.28
LIMK2-206ENST00000462625 COL4A5P29400 1685 aa29.28■■■□□ 2.28
LIMK2-206ENST00000462625 DUOX1Q9NRD9 1551 aa29.27■■■□□ 2.28
LIMK2-206ENST00000462625 ITGA6P23229 1130 aa29.27■■■□□ 2.28
LIMK2-206ENST00000462625 BRPF1P55201 1214 aaPredicted RBP29.27■■■□□ 2.28
LIMK2-206ENST00000462625 BSDC1Q9NW68 430 aaPredicted RBP29.27■■■□□ 2.28
LIMK2-206ENST00000462625 ZNRF3Q9ULT6 936 aa29.27■■■□□ 2.28
LIMK2-206ENST00000462625 LTBP1Q14766 1721 aa29.26■■■□□ 2.27
LIMK2-206ENST00000462625 RARSP54136 660 aaKnown RBP29.26■■■□□ 2.27
LIMK2-206ENST00000462625 GGA1Q9UJY5 639 aa29.26■■■□□ 2.27
LIMK2-206ENST00000462625 GJA3Q9Y6H8 435 aa29.26■■■□□ 2.27
LIMK2-206ENST00000462625 ANKRD18BA2A2Z9 1011 aa29.25■■■□□ 2.27
LIMK2-206ENST00000462625 POTECB2RU33 542 aa29.25■■■□□ 2.27
LIMK2-206ENST00000462625 FSTL1Q12841 308 aa29.25■■■□□ 2.27
LIMK2-206ENST00000462625 FAM161AQ3B820 660 aa29.25■■■□□ 2.27
LIMK2-206ENST00000462625 TBC1D16Q8TBP0 767 aa29.25■■■□□ 2.27
LIMK2-206ENST00000462625 MPHOSPH8Q99549 860 aa29.25■■■□□ 2.27
LIMK2-206ENST00000462625 POLLQ9UGP5 575 aa29.25■■■□□ 2.27
LIMK2-206ENST00000462625 CHMP3Q9Y3E7 222 aa29.25■■■□□ 2.27
LIMK2-206ENST00000462625 XDHP47989 1333 aa29.24■■■□□ 2.27
LIMK2-206ENST00000462625 ZBED9Q6R2W3 1325 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms