RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 ABCC4O15439 1325 aa14.34□□□□□ -0.11
CBX3-205ENST00000462165 CDHR2Q9BYE9 1310 aa14.34□□□□□ -0.11
CBX3-205ENST00000462165 CASP8AP2Q9UKL3 1982 aa14.33□□□□□ -0.12
CBX3-205ENST00000462165 AOC2O75106 756 aa14.33□□□□□ -0.12
CBX3-205ENST00000462165 RGS19P49795 217 aa14.33□□□□□ -0.12
CBX3-205ENST00000462165 THUMPD2Q9BTF0 503 aaKnown RBP14.33□□□□□ -0.12
CBX3-205ENST00000462165 UTP14AQ9BVJ6 771 aaKnown RBP14.33□□□□□ -0.12
CBX3-205ENST00000462165 TNRC18O15417 2968 aaPredicted RBP14.33□□□□□ -0.12
CBX3-205ENST00000462165 TAF1P21675 1872 aa14.32□□□□□ -0.12
CBX3-205ENST00000462165 CCDC85CA6NKD9 419 aa14.32□□□□□ -0.12
CBX3-205ENST00000462165 CA12O43570 354 aa14.32□□□□□ -0.12
CBX3-205ENST00000462165 BBOX1O75936 387 aa14.32□□□□□ -0.12
CBX3-205ENST00000462165 CELF2O95319 508 aaKnown RBP14.32□□□□□ -0.12
CBX3-205ENST00000462165 GMPSP49915 693 aaPredicted RBP14.32□□□□□ -0.12
CBX3-205ENST00000462165 PDIA6Q15084 440 aa14.32□□□□□ -0.12
CBX3-205ENST00000462165 CIAPIN1Q6FI81 312 aa14.32□□□□□ -0.12
CBX3-205ENST00000462165 SP8Q8IXZ3 490 aa14.32□□□□□ -0.12
CBX3-205ENST00000462165 ZC3H15Q8WU90 426 aaKnown RBP14.32□□□□□ -0.12
CBX3-205ENST00000462165 MLLT1Q03111 559 aaPredicted RBP14.31□□□□□ -0.12
CBX3-205ENST00000462165 KIAA2012Q0VF49 1180 aa14.31□□□□□ -0.12
CBX3-205ENST00000462165 DPP8Q6V1X1 898 aaPredicted RBP14.31□□□□□ -0.12
CBX3-205ENST00000462165 MPNDQ8N594 471 aa14.31□□□□□ -0.12
CBX3-205ENST00000462165 GLIS2Q9BZE0 524 aaPredicted RBP14.31□□□□□ -0.12
CBX3-205ENST00000462165 TSKSQ9UJT2 592 aa14.31□□□□□ -0.12
CBX3-205ENST00000462165 LRRC37AA6NMS7 1700 aa14.31□□□□□ -0.12
CBX3-205ENST00000462165 BRPF1P55201 1214 aaPredicted RBP14.3□□□□□ -0.12
CBX3-205ENST00000462165 PNNQ9H307 717 aaKnown RBP14.3□□□□□ -0.12
CBX3-205ENST00000462165 TSPYL4Q9UJ04 414 aa14.3□□□□□ -0.12
CBX3-205ENST00000462165 EIF2S2P20042 333 aaKnown RBP14.29□□□□□ -0.12
CBX3-205ENST00000462165 HIRAP54198 1017 aaPredicted RBP14.29□□□□□ -0.12
CBX3-205ENST00000462165 TNIP1Q15025 636 aa14.29□□□□□ -0.12
CBX3-205ENST00000462165 HSP90AB3PQ58FF7 597 aa14.29□□□□□ -0.12
CBX3-205ENST00000462165 CDC37L1Q7L3B6 337 aa14.29□□□□□ -0.12
CBX3-205ENST00000462165 BCL2L13Q9BXK5 485 aa14.29□□□□□ -0.12
CBX3-205ENST00000462165 MAPK8IP3Q9UPT6 1336 aa14.29□□□□□ -0.12
CBX3-205ENST00000462165 DUOX1Q9NRD9 1551 aa14.29□□□□□ -0.12
CBX3-205ENST00000462165 POLR2AP24928 1970 aaKnown RBP14.29□□□□□ -0.12
CBX3-205ENST00000462165 RAD17O75943 681 aa14.28□□□□□ -0.12
CBX3-205ENST00000462165 GRAPQ13588 217 aa14.28□□□□□ -0.12
CBX3-205ENST00000462165 PROSER3Q2NL68 480 aa14.28□□□□□ -0.12
CBX3-205ENST00000462165 NLRP10Q86W26 655 aa14.28□□□□□ -0.12
CBX3-205ENST00000462165 DDX60Q8IY21 1712 aaKnown RBP14.28□□□□□ -0.12
CBX3-205ENST00000462165 GRAPLQ8TC17 118 aaPredicted RBP14.28□□□□□ -0.12
CBX3-205ENST00000462165 TRPM4Q8TD43 1214 aa14.28□□□□□ -0.12
CBX3-205ENST00000462165 MCOLN1Q9GZU1 580 aa14.28□□□□□ -0.12
CBX3-205ENST00000462165 BABAM1Q9NWV8 329 aa14.28□□□□□ -0.12
CBX3-205ENST00000462165 YDJCA8MPS7 323 aa14.27□□□□□ -0.13
CBX3-205ENST00000462165 ANXA1P04083 346 aa14.27□□□□□ -0.13
CBX3-205ENST00000462165 HCLS1P14317 486 aaPredicted RBP14.27□□□□□ -0.13
CBX3-205ENST00000462165 DDX46Q7L014 1031 aaKnown RBP14.27□□□□□ -0.13
CBX3-205ENST00000462165 TMC4Q7Z404 712 aa14.27□□□□□ -0.13
CBX3-205ENST00000462165 ZNF408Q9H9D4 720 aa14.27□□□□□ -0.13
CBX3-205ENST00000462165 CNOT7Q9UIV1 285 aaKnown RBP14.27□□□□□ -0.13
CBX3-205ENST00000462165 NOGQ13253 232 aa14.26□□□□□ -0.13
CBX3-205ENST00000462165 TCIRG1Q13488 830 aa14.26□□□□□ -0.13
CBX3-205ENST00000462165 COPS6Q7L5N1 327 aa14.26□□□□□ -0.13
CBX3-205ENST00000462165 DPF2Q92785 391 aa14.26□□□□□ -0.13
CBX3-205ENST00000462165 TRMT112Q9UI30 125 aaKnown RBP14.26□□□□□ -0.13
CBX3-205ENST00000462165 SH3TC1Q8TE82 1336 aa14.25□□□□□ -0.13
CBX3-205ENST00000462165 SHTN1A0MZ66 631 aa14.25□□□□□ -0.13
CBX3-205ENST00000462165 H7C1D1 291 aa14.25□□□□□ -0.13
CBX3-205ENST00000462165 HUNKP57058 714 aa14.24□□□□□ -0.13
CBX3-205ENST00000462165 RIPK4P57078 832 aa14.24□□□□□ -0.13
CBX3-205ENST00000462165 AIMP1Q12904 312 aaKnown RBP14.24□□□□□ -0.13
CBX3-205ENST00000462165 DGKZQ13574 1117 aa14.24□□□□□ -0.13
CBX3-205ENST00000462165 USP48Q86UV5 1035 aa14.24□□□□□ -0.13
CBX3-205ENST00000462165 MICALL2Q8IY33 904 aa14.24□□□□□ -0.13
CBX3-205ENST00000462165 XAGE3Q8WTP9 111 aa14.24□□□□□ -0.13
CBX3-205ENST00000462165 ZIC5Q96T25 663 aa14.24□□□□□ -0.13
CBX3-205ENST00000462165 AKAP11Q9UKA4 1901 aa14.23□□□□□ -0.13
CBX3-205ENST00000462165 PSMD14O00487 310 aa14.23□□□□□ -0.13
CBX3-205ENST00000462165 WASHC4Q2M389 1173 aa14.23□□□□□ -0.13
CBX3-205ENST00000462165 NECTIN2Q92692 538 aa14.23□□□□□ -0.13
CBX3-205ENST00000462165 ZBTB12Q9Y330 459 aaPredicted RBP14.23□□□□□ -0.13
CBX3-205ENST00000462165 SAMD7Q7Z3H4 446 aa14.22□□□□□ -0.13
CBX3-205ENST00000462165 CFAP44Q96MT7 982 aa14.22□□□□□ -0.13
CBX3-205ENST00000462165 FAM155AB1AL88 458 aaPredicted RBP14.21□□□□□ -0.13
CBX3-205ENST00000462165 RPS12P25398 132 aaKnown RBP14.21□□□□□ -0.13
CBX3-205ENST00000462165 LMOD3Q0VAK6 560 aa14.21□□□□□ -0.13
CBX3-205ENST00000462165 SF3B3Q15393 1217 aaKnown RBP14.21□□□□□ -0.13
CBX3-205ENST00000462165 RGMBQ6NW40 437 aa14.21□□□□□ -0.13
CBX3-205ENST00000462165 DLK2Q6UY11 383 aa14.21□□□□□ -0.13
CBX3-205ENST00000462165 KRT26Q7Z3Y9 468 aa14.21□□□□□ -0.13
CBX3-205ENST00000462165 DBNDD1Q9H9R9 158 aa14.21□□□□□ -0.13
CBX3-205ENST00000462165 NSFL1CQ9UNZ2 370 aaKnown RBP14.21□□□□□ -0.13
CBX3-205ENST00000462165 COL4A1P02462 1669 aa14.2□□□□□ -0.14
CBX3-205ENST00000462165 SCN9AQ15858 1988 aa14.2□□□□□ -0.14
CBX3-205ENST00000462165 EGFRP00533 1210 aa14.2□□□□□ -0.14
CBX3-205ENST00000462165 TMPOP42166 694 aaKnown RBP14.2□□□□□ -0.14
CBX3-205ENST00000462165 C2orf69Q8N8R5 385 aa14.2□□□□□ -0.14
CBX3-205ENST00000462165 CELF1Q92879 486 aaKnown RBP14.2□□□□□ -0.14
CBX3-205ENST00000462165 ISCA1Q9BUE6 129 aa14.2□□□□□ -0.14
CBX3-205ENST00000462165 GBA2Q9HCG7 927 aaPredicted RBP14.2□□□□□ -0.14
CBX3-205ENST00000462165 SAGE1Q9NXZ1 904 aa14.2□□□□□ -0.14
CBX3-205ENST00000462165 POLLQ9UGP5 575 aa14.2□□□□□ -0.14
CBX3-205ENST00000462165 RIMBP2O15034 1052 aa14.19□□□□□ -0.14
CBX3-205ENST00000462165 ECE2O60344 883 aa14.19□□□□□ -0.14
CBX3-205ENST00000462165 TBC1D10BQ4KMP7 808 aaPredicted RBP14.19□□□□□ -0.14
CBX3-205ENST00000462165 PLBD2Q8NHP8 589 aa14.19□□□□□ -0.14
CBX3-205ENST00000462165 CCDC102AQ96A19 550 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms