RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 GRAPQ13588 217 aa12.49□□□□□ -0.41
CD40-203ENST00000461171 SF3B3Q15393 1217 aaKnown RBP12.49□□□□□ -0.41
CD40-203ENST00000461171 LDHDQ86WU2 507 aa12.49□□□□□ -0.41
CD40-203ENST00000461171 SP8Q8IXZ3 490 aa12.49□□□□□ -0.41
CD40-203ENST00000461171 LARGE2Q8N3Y3 721 aa12.49□□□□□ -0.41
CD40-203ENST00000461171 JMYQ8N9B5 988 aa12.49□□□□□ -0.41
CD40-203ENST00000461171 GRAPLQ8TC17 118 aaPredicted RBP12.49□□□□□ -0.41
CD40-203ENST00000461171 TSR2Q969E8 191 aaKnown RBP12.49□□□□□ -0.41
CD40-203ENST00000461171 ZNF428Q96B54 188 aa12.49□□□□□ -0.41
CD40-203ENST00000461171 HACL1Q9UJ83 578 aa12.49□□□□□ -0.41
CD40-203ENST00000461171 PASKQ96RG2 1323 aa12.48□□□□□ -0.41
CD40-203ENST00000461171 ANP32CO43423 234 aa12.48□□□□□ -0.41
CD40-203ENST00000461171 DDX46Q7L014 1031 aaKnown RBP12.48□□□□□ -0.41
CD40-203ENST00000461171 FAM89AQ96GI7 184 aa12.48□□□□□ -0.41
CD40-203ENST00000461171 VPS33BQ9H267 617 aa12.48□□□□□ -0.41
CD40-203ENST00000461171 PPIP5K2O43314 1243 aa12.47□□□□□ -0.41
CD40-203ENST00000461171 EPHX2P34913 555 aa12.47□□□□□ -0.41
CD40-203ENST00000461171 CCDC30Q5VVM6 783 aa12.47□□□□□ -0.41
CD40-203ENST00000461171 TMC4Q7Z404 712 aa12.47□□□□□ -0.41
CD40-203ENST00000461171 RIC3Q7Z5B4 369 aa12.47□□□□□ -0.41
CD40-203ENST00000461171 CHMP4AQ9BY43 222 aa12.47□□□□□ -0.41
CD40-203ENST00000461171 IRS4O14654 1257 aaPredicted RBP12.46□□□□□ -0.41
CD40-203ENST00000461171 SCNN1DP51172 638 aa12.46□□□□□ -0.41
CD40-203ENST00000461171 EIF6P56537 245 aaKnown RBP12.46□□□□□ -0.41
CD40-203ENST00000461171 KIAA2012Q0VF49 1180 aa12.46□□□□□ -0.41
CD40-203ENST00000461171 AOC3Q16853 763 aa12.46□□□□□ -0.41
CD40-203ENST00000461171 DPP8Q6V1X1 898 aaPredicted RBP12.46□□□□□ -0.41
CD40-203ENST00000461171 NIM1KQ8IY84 436 aa12.46□□□□□ -0.41
CD40-203ENST00000461171 ZBTB38Q8NAP3 1195 aaPredicted RBP12.46□□□□□ -0.41
CD40-203ENST00000461171 CCDC191Q8NCU4 936 aa12.46□□□□□ -0.41
CD40-203ENST00000461171 SUPT20HQ8NEM7 779 aa12.46□□□□□ -0.41
CD40-203ENST00000461171 CELF1Q92879 486 aaKnown RBP12.46□□□□□ -0.41
CD40-203ENST00000461171 METTL22Q9BUU2 404 aaPredicted RBP12.46□□□□□ -0.41
CD40-203ENST00000461171 TMX4Q9H1E5 349 aaPredicted RBP12.46□□□□□ -0.41
CD40-203ENST00000461171 PCNTO95613 3336 aa12.45□□□□□ -0.42
CD40-203ENST00000461171 FANCIQ9NVI1 1328 aa12.45□□□□□ -0.42
CD40-203ENST00000461171 ITGBL1O95965 494 aaPredicted RBP12.45□□□□□ -0.42
CD40-203ENST00000461171 RTL5Q5HYW3 569 aaPredicted RBP12.45□□□□□ -0.42
CD40-203ENST00000461171 PNMA8AQ86V59 439 aaPredicted RBP12.45□□□□□ -0.42
CD40-203ENST00000461171 MPNDQ8N594 471 aa12.45□□□□□ -0.42
CD40-203ENST00000461171 MYD88Q99836 296 aa12.45□□□□□ -0.42
CD40-203ENST00000461171 DDX58O95786 925 aaKnown RBP12.44□□□□□ -0.42
CD40-203ENST00000461171 PCCAP05165 728 aaPredicted RBP12.44□□□□□ -0.42
CD40-203ENST00000461171 TWISTNBQ3B726 338 aaPredicted RBP12.44□□□□□ -0.42
CD40-203ENST00000461171 CREBZFQ9NS37 354 aa12.44□□□□□ -0.42
CD40-203ENST00000461171 CWC25Q9NXE8 425 aaPredicted RBP12.44□□□□□ -0.42
CD40-203ENST00000461171 ZNRF3Q9ULT6 936 aa12.44□□□□□ -0.42
CD40-203ENST00000461171 MAP3K2Q9Y2U5 619 aa12.44□□□□□ -0.42
CD40-203ENST00000461171 GJA3Q9Y6H8 435 aa12.44□□□□□ -0.42
CD40-203ENST00000461171 CDHR2Q9BYE9 1310 aa12.43□□□□□ -0.42
CD40-203ENST00000461171 PI4KAP2A4QPH2 592 aa12.43□□□□□ -0.42
CD40-203ENST00000461171 IGKV5-2P06315 115 aa12.43□□□□□ -0.42
CD40-203ENST00000461171 CXCL9Q07325 125 aa12.43□□□□□ -0.42
CD40-203ENST00000461171 EAPPQ56P03 285 aaPredicted RBP12.43□□□□□ -0.42
CD40-203ENST00000461171 KSR2Q6VAB6 950 aa12.43□□□□□ -0.42
CD40-203ENST00000461171 WDR63Q8IWG1 891 aa12.43□□□□□ -0.42
CD40-203ENST00000461171 PI4KAP1Q8N8J0 262 aa12.43□□□□□ -0.42
CD40-203ENST00000461171 STK31Q9BXU1 1019 aa12.43□□□□□ -0.42
CD40-203ENST00000461171 NPM3O75607 178 aaKnown RBP12.42□□□□□ -0.42
CD40-203ENST00000461171 HSP90B1P14625 803 aaKnown RBP12.42□□□□□ -0.42
CD40-203ENST00000461171 LMOD1P29536 600 aaPredicted RBP12.42□□□□□ -0.42
CD40-203ENST00000461171 EPS15P42566 896 aa12.42□□□□□ -0.42
CD40-203ENST00000461171 G2E3Q7L622 706 aa12.42□□□□□ -0.42
CD40-203ENST00000461171 GPRC5DQ9NZD1 345 aa12.42□□□□□ -0.42
CD40-203ENST00000461171 YDJCA8MPS7 323 aa12.41□□□□□ -0.42
CD40-203ENST00000461171 RPS8P62241 208 aaKnown RBP12.41□□□□□ -0.42
CD40-203ENST00000461171 GPSM2P81274 684 aa12.41□□□□□ -0.42
CD40-203ENST00000461171 MAP1SQ66K74 1059 aaPredicted RBP12.41□□□□□ -0.42
CD40-203ENST00000461171 SEC31BQ9NQW1 1179 aa12.41□□□□□ -0.42
CD40-203ENST00000461171 POLLQ9UGP5 575 aa12.41□□□□□ -0.42
CD40-203ENST00000461171 CACNA1FO60840 1977 aa12.41□□□□□ -0.42
CD40-203ENST00000461171 PDE8AO60658 829 aa12.4□□□□□ -0.42
CD40-203ENST00000461171 GMPSP49915 693 aaPredicted RBP12.4□□□□□ -0.42
CD40-203ENST00000461171 CCDC152Q4G0S7 254 aa12.4□□□□□ -0.42
CD40-203ENST00000461171 CIAPIN1Q6FI81 312 aa12.4□□□□□ -0.42
CD40-203ENST00000461171 USP50Q70EL3 339 aaPredicted RBP12.4□□□□□ -0.42
CD40-203ENST00000461171 CNTROBQ8N137 903 aa12.4□□□□□ -0.42
CD40-203ENST00000461171 JARID2Q92833 1246 aaPredicted RBP12.4□□□□□ -0.42
CD40-203ENST00000461171 PODXL2Q9NZ53 605 aa12.4□□□□□ -0.42
CD40-203ENST00000461171 NSFL1CQ9UNZ2 370 aaKnown RBP12.4□□□□□ -0.42
CD40-203ENST00000461171 CNTNAP1P78357 1384 aa12.4□□□□□ -0.42
CD40-203ENST00000461171 RTL9Q8NET4 1388 aa12.4□□□□□ -0.42
CD40-203ENST00000461171 MYH3P11055 1940 aa12.39□□□□□ -0.43
CD40-203ENST00000461171 NEURL1BA8MQ27 555 aa12.39□□□□□ -0.43
CD40-203ENST00000461171 VAMP4O75379 141 aa12.39□□□□□ -0.43
CD40-203ENST00000461171 RAD17O75943 681 aa12.39□□□□□ -0.43
CD40-203ENST00000461171 SLC4A2P04920 1241 aa12.39□□□□□ -0.43
CD40-203ENST00000461171 CTSWP56202 376 aa12.39□□□□□ -0.43
CD40-203ENST00000461171 FLIIQ13045 1269 aa12.39□□□□□ -0.43
CD40-203ENST00000461171 CWF19L2Q2TBE0 894 aaKnown RBP12.39□□□□□ -0.43
CD40-203ENST00000461171 TBC1D16Q8TBP0 767 aa12.39□□□□□ -0.43
CD40-203ENST00000461171 CLEC11AQ9Y240 323 aa12.39□□□□□ -0.43
CD40-203ENST00000461171 ZNF521Q96K83 1311 aa12.38□□□□□ -0.43
CD40-203ENST00000461171 SCN9AQ15858 1988 aa12.38□□□□□ -0.43
CD40-203ENST00000461171 TMEM88BA6NKF7 163 aa12.38□□□□□ -0.43
CD40-203ENST00000461171 EXOSC9Q06265 439 aaKnown RBP12.38□□□□□ -0.43
CD40-203ENST00000461171 NEXNQ0ZGT2 675 aa12.38□□□□□ -0.43
CD40-203ENST00000461171 TNIP1Q15025 636 aa12.38□□□□□ -0.43
CD40-203ENST00000461171 WASHC4Q2M389 1173 aa12.38□□□□□ -0.43
CD40-203ENST00000461171 ADARB2Q9NS39 739 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 374.9 ms