RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 STIM2Q9P246 746 aa7.09□□□□□ -1.27
SF3A3-202ENST00000460925 CHMP3Q9Y3E7 222 aa7.09□□□□□ -1.27
SF3A3-202ENST00000460925 WASF2Q9Y6W5 498 aa7.09□□□□□ -1.27
SF3A3-202ENST00000460925 V9GY48 417 aaPredicted RBP7.09□□□□□ -1.27
SF3A3-202ENST00000460925 LMTK2Q8IWU2 1503 aa7.09□□□□□ -1.27
SF3A3-202ENST00000460925 NPATQ14207 1427 aa7.09□□□□□ -1.28
SF3A3-202ENST00000460925 CLTCL1P53675 1640 aa7.09□□□□□ -1.28
SF3A3-202ENST00000460925 KANK1Q14678 1352 aa7.08□□□□□ -1.28
SF3A3-202ENST00000460925 SYNMO15061 1565 aa7.08□□□□□ -1.28
SF3A3-202ENST00000460925 EML1O00423 815 aa7.08□□□□□ -1.28
SF3A3-202ENST00000460925 MPSTP25325 297 aa7.08□□□□□ -1.28
SF3A3-202ENST00000460925 CENPCQ03188 943 aa7.08□□□□□ -1.28
SF3A3-202ENST00000460925 TBCELQ5QJ74 424 aa7.08□□□□□ -1.28
SF3A3-202ENST00000460925 GIPC2Q8TF65 315 aa7.08□□□□□ -1.28
SF3A3-202ENST00000460925 MRRFQ96E11 262 aaKnown RBP7.08□□□□□ -1.28
SF3A3-202ENST00000460925 USP3Q9Y6I4 520 aa7.08□□□□□ -1.28
SF3A3-202ENST00000460925 WASHC2CQ9Y4E1 1318 aa7.07□□□□□ -1.28
SF3A3-202ENST00000460925 A0A0G2JS52 829 aa7.07□□□□□ -1.28
SF3A3-202ENST00000460925 SERTM1A2A2V5 107 aa7.07□□□□□ -1.28
SF3A3-202ENST00000460925 NDUFB5O43674 189 aa7.07□□□□□ -1.28
SF3A3-202ENST00000460925 EIF1AXP47813 144 aaKnown RBP7.07□□□□□ -1.28
SF3A3-202ENST00000460925 CEBPAP49715 358 aaPredicted RBP7.07□□□□□ -1.28
SF3A3-202ENST00000460925 CBLBQ13191 982 aa7.07□□□□□ -1.28
SF3A3-202ENST00000460925 ABTB2Q8N961 1025 aa7.07□□□□□ -1.28
SF3A3-202ENST00000460925 ZDHHC1Q8WTX9 485 aa7.07□□□□□ -1.28
SF3A3-202ENST00000460925 ITPKCQ96DU7 683 aa7.07□□□□□ -1.28
SF3A3-202ENST00000460925 MPHOSPH9Q99550 1183 aa7.07□□□□□ -1.28
SF3A3-202ENST00000460925 LRFN2Q9ULH4 789 aa7.07□□□□□ -1.28
SF3A3-202ENST00000460925 GPC1P35052 558 aa7.06□□□□□ -1.28
SF3A3-202ENST00000460925 NOS2P35228 1153 aa7.06□□□□□ -1.28
SF3A3-202ENST00000460925 ERVK-7P63135 1459 aa7.05□□□□□ -1.28
SF3A3-202ENST00000460925 PLA2R1Q13018 1463 aa7.05□□□□□ -1.28
SF3A3-202ENST00000460925 TREHO43280 583 aa7.05□□□□□ -1.28
SF3A3-202ENST00000460925 FZD6O60353 706 aa7.05□□□□□ -1.28
SF3A3-202ENST00000460925 GDF9O60383 454 aa7.05□□□□□ -1.28
SF3A3-202ENST00000460925 ZIC2O95409 532 aaPredicted RBP7.05□□□□□ -1.28
SF3A3-202ENST00000460925 IGHA2P01877 340 aa7.05□□□□□ -1.28
SF3A3-202ENST00000460925 TIMP2P16035 220 aa7.05□□□□□ -1.28
SF3A3-202ENST00000460925 MMRN1Q13201 1228 aa7.05□□□□□ -1.28
SF3A3-202ENST00000460925 RTN1Q16799 776 aa7.05□□□□□ -1.28
SF3A3-202ENST00000460925 C1orf53Q5VUE5 145 aa7.05□□□□□ -1.28
SF3A3-202ENST00000460925 TMC7Q7Z402 723 aa7.05□□□□□ -1.28
SF3A3-202ENST00000460925 NLRP3Q96P20 1036 aa7.05□□□□□ -1.28
SF3A3-202ENST00000460925 TOR4AQ9NXH8 423 aa7.05□□□□□ -1.28
SF3A3-202ENST00000460925 BRPF3Q9ULD4 1205 aa7.05□□□□□ -1.28
SF3A3-202ENST00000460925 TRPM2O94759 1503 aa7.05□□□□□ -1.28
SF3A3-202ENST00000460925 MYO3AQ8NEV4 1616 aa7.05□□□□□ -1.28
SF3A3-202ENST00000460925 SPATA31D1Q6ZQQ2 1576 aa7.04□□□□□ -1.28
SF3A3-202ENST00000460925 BRD2P25440 801 aaKnown RBP7.04□□□□□ -1.28
SF3A3-202ENST00000460925 WDR4P57081 412 aaKnown RBP7.04□□□□□ -1.28
SF3A3-202ENST00000460925 FMR1Q06787 632 aaKnown RBP eCLIP7.04□□□□□ -1.28
SF3A3-202ENST00000460925 FOXC1Q12948 553 aa7.04□□□□□ -1.28
SF3A3-202ENST00000460925 DSC3Q14574 896 aa7.04□□□□□ -1.28
SF3A3-202ENST00000460925 EAPPQ56P03 285 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-202ENST00000460925 ALDH16A1Q8IZ83 802 aa7.04□□□□□ -1.28
SF3A3-202ENST00000460925 L3MBTL2Q969R5 705 aa7.04□□□□□ -1.28
SF3A3-202ENST00000460925 DMRTB1Q96MA1 342 aa7.04□□□□□ -1.28
SF3A3-202ENST00000460925 SIN3AQ96ST3 1273 aa7.04□□□□□ -1.28
SF3A3-202ENST00000460925 FAM129BQ96TA1 746 aa7.04□□□□□ -1.28
SF3A3-202ENST00000460925 NIFKQ9BYG3 293 aaKnown RBP7.04□□□□□ -1.28
SF3A3-202ENST00000460925 PIK3C2BO00750 1634 aa7.04□□□□□ -1.28
SF3A3-202ENST00000460925 ZMYM3Q14202 1370 aa7.04□□□□□ -1.28
SF3A3-202ENST00000460925 PTPRMP28827 1452 aa7.04□□□□□ -1.28
SF3A3-202ENST00000460925 KIF1BO60333 1816 aa7.04□□□□□ -1.28
SF3A3-202ENST00000460925 J3QL48 77 aa7.03□□□□□ -1.28
SF3A3-202ENST00000460925 C11orf91Q3C1V1 193 aa7.03□□□□□ -1.28
SF3A3-202ENST00000460925 MEIOBQ8N635 442 aa7.03□□□□□ -1.28
SF3A3-202ENST00000460925 ALKBH8Q96BT7 664 aaKnown RBP7.03□□□□□ -1.28
SF3A3-202ENST00000460925 ZSCAN10Q96SZ4 725 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-202ENST00000460925 PRKD2Q9BZL6 878 aa7.03□□□□□ -1.28
SF3A3-202ENST00000460925 GRIP2Q9C0E4 1043 aa7.03□□□□□ -1.28
SF3A3-202ENST00000460925 ZFAND3Q9H8U3 227 aa7.03□□□□□ -1.28
SF3A3-202ENST00000460925 ANKRD30BQ9BXX2 1392 aa7.03□□□□□ -1.28
SF3A3-202ENST00000460925 NOS1P29475 1434 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 ARHGAP31Q2M1Z3 1444 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 CNTLNQ9NXG0 1405 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 TTC24A2A3L6 582 aaPredicted RBP7.02□□□□□ -1.29
SF3A3-202ENST00000460925 MEN1O00255 615 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 SMPD1P17405 629 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 RNF144AP50876 292 aaPredicted RBP7.02□□□□□ -1.29
SF3A3-202ENST00000460925 PRR20EP86478 221 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 PRR20CP86479 221 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 PRR20DP86480 221 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 PRR20BP86481 221 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 PRR20AP86496 221 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 PDE3BQ13370 1112 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 SH3PXD2AQ5TCZ1 1133 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 CYP4X1Q8N118 509 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 RHBDD1Q8TEB9 315 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 AGBL1Q96MI9 1066 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 CCDC87Q9NVE4 849 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 CABP1Q9NZU7 370 aa7.02□□□□□ -1.29
SF3A3-202ENST00000460925 RPRD2Q5VT52 1461 aaKnown RBP7.02□□□□□ -1.29
SF3A3-202ENST00000460925 PTPRTO14522 1441 aa7.01□□□□□ -1.29
SF3A3-202ENST00000460925 UBR1Q8IWV7 1749 aa7.01□□□□□ -1.29
SF3A3-202ENST00000460925 TNRQ92752 1358 aa7.01□□□□□ -1.29
SF3A3-202ENST00000460925 ZBTB39O15060 712 aa7.01□□□□□ -1.29
SF3A3-202ENST00000460925 P4HBP07237 508 aaKnown RBP7.01□□□□□ -1.29
SF3A3-202ENST00000460925 FGD1P98174 961 aa7.01□□□□□ -1.29
SF3A3-202ENST00000460925 NEUROD1Q13562 356 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms