RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 CDCA8Q53HL2 280 aa6.41□□□□□ -1.38
RFC4-211ENST00000460408 WFDC12Q8WWY7 111 aa6.41□□□□□ -1.38
RFC4-211ENST00000460408 TRAIPQ9BWF2 469 aa6.41□□□□□ -1.38
RFC4-211ENST00000460408 FRRS1LQ9P0K9 344 aa6.41□□□□□ -1.38
RFC4-211ENST00000460408 DMGDHQ9UI17 866 aaKnown RBP6.41□□□□□ -1.38
RFC4-211ENST00000460408 FAM196BA6NMK8 535 aa6.4□□□□□ -1.38
RFC4-211ENST00000460408 TGFBR3LH3BV60 316 aa6.4□□□□□ -1.38
RFC4-211ENST00000460408 MAP3K6O95382 1288 aa6.4□□□□□ -1.38
RFC4-211ENST00000460408 RTN1Q16799 776 aa6.4□□□□□ -1.38
RFC4-211ENST00000460408 CRTC2Q53ET0 693 aaPredicted RBP6.4□□□□□ -1.38
RFC4-211ENST00000460408 FAM35AQ86V20 835 aa6.4□□□□□ -1.38
RFC4-211ENST00000460408 KRTAP19-1Q8IUB9 90 aa6.4□□□□□ -1.38
RFC4-211ENST00000460408 TTC9Q92623 222 aa6.4□□□□□ -1.38
RFC4-211ENST00000460408 ZMIZ1Q9ULJ6 1067 aa6.4□□□□□ -1.38
RFC4-211ENST00000460408 ACIN1Q9UKV3 1341 aaKnown RBP6.4□□□□□ -1.39
RFC4-211ENST00000460408 TMEM88BA6NKF7 163 aa6.39□□□□□ -1.39
RFC4-211ENST00000460408 GRNP28799 593 aaKnown RBP6.39□□□□□ -1.39
RFC4-211ENST00000460408 NOS3P29474 1203 aa6.39□□□□□ -1.39
RFC4-211ENST00000460408 IREB2P48200 963 aaKnown RBP6.39□□□□□ -1.39
RFC4-211ENST00000460408 PTK7Q13308 1070 aa6.39□□□□□ -1.39
RFC4-211ENST00000460408 IGF2-ASQ6U949 168 aa6.39□□□□□ -1.39
RFC4-211ENST00000460408 SCG3Q8WXD2 468 aaKnown RBP6.39□□□□□ -1.39
RFC4-211ENST00000460408 NGLY1Q96IV0 654 aa6.39□□□□□ -1.39
RFC4-211ENST00000460408 ZNF594Q96JF6 807 aaPredicted RBP6.39□□□□□ -1.39
RFC4-211ENST00000460408 LPIN3Q9BQK8 851 aa6.39□□□□□ -1.39
RFC4-211ENST00000460408 BCS1LQ9Y276 419 aa6.39□□□□□ -1.39
RFC4-211ENST00000460408 USTQ9Y2C2 406 aa6.39□□□□□ -1.39
RFC4-211ENST00000460408 RBM19Q9Y4C8 960 aaKnown RBP6.39□□□□□ -1.39
RFC4-211ENST00000460408 USP17L15C9J2P7 530 aa6.38□□□□□ -1.39
RFC4-211ENST00000460408 USP17L10C9JJH3 530 aa6.38□□□□□ -1.39
RFC4-211ENST00000460408 USP17L13C9JLJ4 530 aa6.38□□□□□ -1.39
RFC4-211ENST00000460408 USP17L12C9JPN9 530 aa6.38□□□□□ -1.39
RFC4-211ENST00000460408 USP17L11C9JVI0 530 aa6.38□□□□□ -1.39
RFC4-211ENST00000460408 USP17L21D6R901 530 aa6.38□□□□□ -1.39
RFC4-211ENST00000460408 USP17L18D6R9N7 530 aa6.38□□□□□ -1.39
RFC4-211ENST00000460408 USP17L22D6RA61 530 aa6.38□□□□□ -1.39
RFC4-211ENST00000460408 USP17L17D6RBQ6 530 aa6.38□□□□□ -1.39
RFC4-211ENST00000460408 USP17L19D6RCP7 530 aa6.38□□□□□ -1.39
RFC4-211ENST00000460408 USP17L20D6RJB6 530 aa6.38□□□□□ -1.39
RFC4-211ENST00000460408 PDIA4P13667 645 aaKnown RBP6.38□□□□□ -1.39
RFC4-211ENST00000460408 CPB1P15086 417 aa6.38□□□□□ -1.39
RFC4-211ENST00000460408 USP17L24Q0WX57 530 aa6.38□□□□□ -1.39
RFC4-211ENST00000460408 TRPM4Q8TD43 1214 aa6.38□□□□□ -1.39
RFC4-211ENST00000460408 C11orf16Q9NQ32 467 aa6.38□□□□□ -1.39
RFC4-211ENST00000460408 ZBTB42B2RXF5 422 aa6.37□□□□□ -1.39
RFC4-211ENST00000460408 EPB42P16452 691 aa6.37□□□□□ -1.39
RFC4-211ENST00000460408 SEC13P55735 322 aa6.37□□□□□ -1.39
RFC4-211ENST00000460408 PERM1Q5SV97 790 aa6.37□□□□□ -1.39
RFC4-211ENST00000460408 PRR23CQ6ZRP0 262 aa6.37□□□□□ -1.39
RFC4-211ENST00000460408 WFDC8Q8IUA0 241 aa6.37□□□□□ -1.39
RFC4-211ENST00000460408 STK32AQ8WU08 396 aa6.37□□□□□ -1.39
RFC4-211ENST00000460408 CHMP7Q8WUX9 453 aaPredicted RBP6.37□□□□□ -1.39
RFC4-211ENST00000460408 MEGF10Q96KG7 1140 aa6.37□□□□□ -1.39
RFC4-211ENST00000460408 KRTAP9-9Q9BYP9 154 aa6.37□□□□□ -1.39
RFC4-211ENST00000460408 KRTAP9-4Q9BYQ2 154 aa6.37□□□□□ -1.39
RFC4-211ENST00000460408 ZFATQ9P243 1243 aa6.37□□□□□ -1.39
RFC4-211ENST00000460408 NOVA2Q9UNW9 492 aaKnown RBP6.37□□□□□ -1.39
RFC4-211ENST00000460408 CARNS1A5YM72 827 aa6.36□□□□□ -1.39
RFC4-211ENST00000460408 RASA1P20936 1047 aa6.36□□□□□ -1.39
RFC4-211ENST00000460408 INPP5BP32019 993 aa6.36□□□□□ -1.39
RFC4-211ENST00000460408 PLAURQ03405 335 aa6.36□□□□□ -1.39
RFC4-211ENST00000460408 TMEM164Q5U3C3 297 aa6.36□□□□□ -1.39
RFC4-211ENST00000460408 DHX32Q7L7V1 743 aaKnown RBP6.36□□□□□ -1.39
RFC4-211ENST00000460408 SLC51AQ86UW1 340 aa6.36□□□□□ -1.39
RFC4-211ENST00000460408 GOLGA2P5Q9HBQ8 144 aa6.36□□□□□ -1.39
RFC4-211ENST00000460408 BTBD11A6QL63 1104 aa6.35□□□□□ -1.39
RFC4-211ENST00000460408 DEAF1O75398 565 aaPredicted RBP6.35□□□□□ -1.39
RFC4-211ENST00000460408 GPLD1P80108 840 aa6.35□□□□□ -1.39
RFC4-211ENST00000460408 FAM69CQ0P6D2 419 aa6.35□□□□□ -1.39
RFC4-211ENST00000460408 MCTP1Q6DN14 999 aa6.35□□□□□ -1.39
RFC4-211ENST00000460408 ELMSAN1Q6PJG2 1045 aa6.35□□□□□ -1.39
RFC4-211ENST00000460408 LARP1Q6PKG0 1096 aaKnown RBP6.35□□□□□ -1.39
RFC4-211ENST00000460408 DZIP1LQ8IYY4 767 aaKnown RBP6.35□□□□□ -1.39
RFC4-211ENST00000460408 DLL1O00548 723 aa6.34□□□□□ -1.39
RFC4-211ENST00000460408 IGFBP4P22692 258 aa6.34□□□□□ -1.39
RFC4-211ENST00000460408 IDH3AP50213 366 aa6.34□□□□□ -1.39
RFC4-211ENST00000460408 ANKMY2Q8IV38 441 aa6.34□□□□□ -1.39
RFC4-211ENST00000460408 IFT43Q96FT9 208 aa6.34□□□□□ -1.39
RFC4-211ENST00000460408 TARSP26639 723 aaKnown RBP6.33□□□□□ -1.4
RFC4-211ENST00000460408 PDE4CQ08493 712 aa6.33□□□□□ -1.4
RFC4-211ENST00000460408 DPYDQ12882 1025 aa6.33□□□□□ -1.4
RFC4-211ENST00000460408 KRT25Q7Z3Z0 450 aa6.33□□□□□ -1.4
RFC4-211ENST00000460408 FSTP19883 344 aa6.32□□□□□ -1.4
RFC4-211ENST00000460408 ARSDP51689 593 aa6.32□□□□□ -1.4
RFC4-211ENST00000460408 NRLP54845 237 aa6.32□□□□□ -1.4
RFC4-211ENST00000460408 MLLT1Q03111 559 aaPredicted RBP6.32□□□□□ -1.4
RFC4-211ENST00000460408 TMEM130Q8N3G9 435 aa6.32□□□□□ -1.4
RFC4-211ENST00000460408 HINFPQ9BQA5 517 aa6.32□□□□□ -1.4
RFC4-211ENST00000460408 SMG9Q9H0W8 520 aaKnown RBP6.32□□□□□ -1.4
RFC4-211ENST00000460408 AKTIPQ9H8T0 292 aa6.32□□□□□ -1.4
RFC4-211ENST00000460408 KLK14Q9P0G3 267 aa6.32□□□□□ -1.4
RFC4-211ENST00000460408 SLAIN2Q9P270 581 aa6.32□□□□□ -1.4
RFC4-211ENST00000460408 COL17A1Q9UMD9 1497 aaPredicted RBP6.32□□□□□ -1.4
RFC4-211ENST00000460408 SASH3O75995 380 aa6.31□□□□□ -1.4
RFC4-211ENST00000460408 RARAP10276 462 aa6.31□□□□□ -1.4
RFC4-211ENST00000460408 ARID4AP29374 1257 aaPredicted RBP6.31□□□□□ -1.4
RFC4-211ENST00000460408 TRIM26Q12899 539 aaPredicted RBP6.31□□□□□ -1.4
RFC4-211ENST00000460408 FAM200AQ8TCP9 573 aa6.31□□□□□ -1.4
RFC4-211ENST00000460408 MRPL18Q9H0U6 180 aaKnown RBP6.31□□□□□ -1.4
RFC4-211ENST00000460408 PCMTD2Q9NV79 361 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms