RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 SCN4AP35499 1836 aa22.42■■□□□ 1.18
SCARNA2-201ENST00000458748 PI4KAP2A4QPH2 592 aa22.41■■□□□ 1.18
SCARNA2-201ENST00000458748 FZD9O00144 591 aa22.41■■□□□ 1.18
SCARNA2-201ENST00000458748 IRS4O14654 1257 aaPredicted RBP22.41■■□□□ 1.18
SCARNA2-201ENST00000458748 VAMP4O75379 141 aa22.41■■□□□ 1.18
SCARNA2-201ENST00000458748 PI4KAP1Q8N8J0 262 aa22.41■■□□□ 1.18
SCARNA2-201ENST00000458748 L3MBTL3Q96JM7 780 aaPredicted RBP22.41■■□□□ 1.18
SCARNA2-201ENST00000458748 TCERG1O14776 1098 aaKnown RBP22.4■■□□□ 1.18
SCARNA2-201ENST00000458748 SUPT20HQ8NEM7 779 aa22.4■■□□□ 1.18
SCARNA2-201ENST00000458748 IQCA1LA6NCM1 817 aa22.39■■□□□ 1.17
SCARNA2-201ENST00000458748 PCCAP05165 728 aaPredicted RBP22.39■■□□□ 1.17
SCARNA2-201ENST00000458748 FLIIQ13045 1269 aa22.39■■□□□ 1.17
SCARNA2-201ENST00000458748 IFFO2Q5TF58 517 aa22.39■■□□□ 1.17
SCARNA2-201ENST00000458748 RTFDC1Q9BY42 306 aaPredicted RBP22.39■■□□□ 1.17
SCARNA2-201ENST00000458748 TAF1P21675 1872 aa22.39■■□□□ 1.17
SCARNA2-201ENST00000458748 FKBP5Q13451 457 aaPredicted RBP22.38■■□□□ 1.17
SCARNA2-201ENST00000458748 RTL5Q5HYW3 569 aaPredicted RBP22.38■■□□□ 1.17
SCARNA2-201ENST00000458748 ZNF428Q96B54 188 aa22.38■■□□□ 1.17
SCARNA2-201ENST00000458748 ZNF521Q96K83 1311 aa22.37■■□□□ 1.17
SCARNA2-201ENST00000458748 E9PSI1 815 aa22.37■■□□□ 1.17
SCARNA2-201ENST00000458748 POTEIP0CG38 1075 aa22.37■■□□□ 1.17
SCARNA2-201ENST00000458748 POTEJP0CG39 1038 aa22.37■■□□□ 1.17
SCARNA2-201ENST00000458748 LARGE2Q8N3Y3 721 aa22.37■■□□□ 1.17
SCARNA2-201ENST00000458748 SPINK5Q9NQ38 1064 aaPredicted RBP22.37■■□□□ 1.17
SCARNA2-201ENST00000458748 LRRC37AA6NMS7 1700 aa22.37■■□□□ 1.17
SCARNA2-201ENST00000458748 ZNF541Q9H0D2 1346 aa22.36■■□□□ 1.17
SCARNA2-201ENST00000458748 DPP8Q6V1X1 898 aaPredicted RBP22.36■■□□□ 1.17
SCARNA2-201ENST00000458748 GPC2Q8N158 579 aa22.36■■□□□ 1.17
SCARNA2-201ENST00000458748 MPNDQ8N594 471 aa22.36■■□□□ 1.17
SCARNA2-201ENST00000458748 EIF6P56537 245 aaKnown RBP22.35■■□□□ 1.17
SCARNA2-201ENST00000458748 JMYQ8N9B5 988 aa22.35■■□□□ 1.17
SCARNA2-201ENST00000458748 PDE8AO60658 829 aa22.34■■□□□ 1.17
SCARNA2-201ENST00000458748 CCDC152Q4G0S7 254 aa22.34■■□□□ 1.17
SCARNA2-201ENST00000458748 DIEXFQ68CQ4 756 aaKnown RBP22.34■■□□□ 1.17
SCARNA2-201ENST00000458748 CHADLQ6NUI6 762 aa22.34■■□□□ 1.17
SCARNA2-201ENST00000458748 G2E3Q7L622 706 aa22.34■■□□□ 1.17
SCARNA2-201ENST00000458748 SLC51AQ86UW1 340 aa22.34■■□□□ 1.17
SCARNA2-201ENST00000458748 NIM1KQ8IY84 436 aa22.34■■□□□ 1.17
SCARNA2-201ENST00000458748 CDHR2Q9BYE9 1310 aa22.33■■□□□ 1.17
SCARNA2-201ENST00000458748 COL4A5P29400 1685 aa22.33■■□□□ 1.17
SCARNA2-201ENST00000458748 PPIP5K2O43314 1243 aa22.33■■□□□ 1.17
SCARNA2-201ENST00000458748 IGKV5-2P06315 115 aa22.33■■□□□ 1.17
SCARNA2-201ENST00000458748 DNAAF4Q8WXU2 420 aa22.33■■□□□ 1.17
SCARNA2-201ENST00000458748 NEURL1BA8MQ27 555 aa22.32■■□□□ 1.16
SCARNA2-201ENST00000458748 CELF1Q92879 486 aaKnown RBP22.32■■□□□ 1.16
SCARNA2-201ENST00000458748 TAF1DQ9H5J8 278 aaPredicted RBP22.32■■□□□ 1.16
SCARNA2-201ENST00000458748 HACL1Q9UJ83 578 aa22.32■■□□□ 1.16
SCARNA2-201ENST00000458748 RPS8P62241 208 aaKnown RBP22.31■■□□□ 1.16
SCARNA2-201ENST00000458748 AOC3Q16853 763 aa22.31■■□□□ 1.16
SCARNA2-201ENST00000458748 MYH3P11055 1940 aa22.31■■□□□ 1.16
SCARNA2-201ENST00000458748 KIAA2012Q0VF49 1180 aa22.3■■□□□ 1.16
SCARNA2-201ENST00000458748 LINS1Q8NG48 757 aa22.3■■□□□ 1.16
SCARNA2-201ENST00000458748 CWF19L2Q2TBE0 894 aaKnown RBP22.29■■□□□ 1.16
SCARNA2-201ENST00000458748 PNMA8AQ86V59 439 aaPredicted RBP22.29■■□□□ 1.16
SCARNA2-201ENST00000458748 LDHDQ86WU2 507 aa22.29■■□□□ 1.16
SCARNA2-201ENST00000458748 ZNRF3Q9ULT6 936 aa22.29■■□□□ 1.16
SCARNA2-201ENST00000458748 GCKRQ14397 625 aa22.28■■□□□ 1.16
SCARNA2-201ENST00000458748 EAPPQ56P03 285 aaPredicted RBP22.28■■□□□ 1.16
SCARNA2-201ENST00000458748 GJA3Q9Y6H8 435 aa22.28■■□□□ 1.16
SCARNA2-201ENST00000458748 DUOX1Q9NRD9 1551 aa22.28■■□□□ 1.16
SCARNA2-201ENST00000458748 H7C1W4 665 aa22.27■■□□□ 1.16
SCARNA2-201ENST00000458748 EPHX2P34913 555 aa22.27■■□□□ 1.16
SCARNA2-201ENST00000458748 SLFN5Q08AF3 891 aa22.27■■□□□ 1.16
SCARNA2-201ENST00000458748 JARID2Q92833 1246 aaPredicted RBP22.27■■□□□ 1.16
SCARNA2-201ENST00000458748 CDC5LQ99459 802 aaKnown RBP22.27■■□□□ 1.16
SCARNA2-201ENST00000458748 NSFL1CQ9UNZ2 370 aaKnown RBP22.27■■□□□ 1.16
SCARNA2-201ENST00000458748 LTBP1Q14766 1721 aa22.26■■□□□ 1.15
SCARNA2-201ENST00000458748 LMOD1P29536 600 aaPredicted RBP22.26■■□□□ 1.15
SCARNA2-201ENST00000458748 CTSWP56202 376 aa22.26■■□□□ 1.15
SCARNA2-201ENST00000458748 UBE3BQ7Z3V4 1068 aa22.26■■□□□ 1.15
SCARNA2-201ENST00000458748 COL4A1P02462 1669 aa22.26■■□□□ 1.15
SCARNA2-201ENST00000458748 ADAMTSL1Q8N6G6 1762 aa22.25■■□□□ 1.15
SCARNA2-201ENST00000458748 ANKRD18AQ8IVF6 992 aa22.25■■□□□ 1.15
SCARNA2-201ENST00000458748 SEC31BQ9NQW1 1179 aa22.25■■□□□ 1.15
SCARNA2-201ENST00000458748 GPSM2P81274 684 aa22.24■■□□□ 1.15
SCARNA2-201ENST00000458748 CXCL9Q07325 125 aa22.24■■□□□ 1.15
SCARNA2-201ENST00000458748 WASHC4Q2M389 1173 aa22.24■■□□□ 1.15
SCARNA2-201ENST00000458748 TTLL11Q8NHH1 800 aa22.24■■□□□ 1.15
SCARNA2-201ENST00000458748 EYA3Q99504 573 aa22.24■■□□□ 1.15
SCARNA2-201ENST00000458748 PODXL2Q9NZ53 605 aa22.24■■□□□ 1.15
SCARNA2-201ENST00000458748 CLEC11AQ9Y240 323 aa22.24■■□□□ 1.15
SCARNA2-201ENST00000458748 RTL9Q8NET4 1388 aa22.24■■□□□ 1.15
SCARNA2-201ENST00000458748 CT47B1P0C2W7 299 aaPredicted RBP22.23■■□□□ 1.15
SCARNA2-201ENST00000458748 TNIP1Q15025 636 aa22.23■■□□□ 1.15
SCARNA2-201ENST00000458748 PLA2G12BQ9BX93 195 aa22.23■■□□□ 1.15
SCARNA2-201ENST00000458748 CREBZFQ9NS37 354 aa22.23■■□□□ 1.15
SCARNA2-201ENST00000458748 C6orf229H3BNL8 230 aa22.22■■□□□ 1.15
SCARNA2-201ENST00000458748 SCNN1DP51172 638 aa22.22■■□□□ 1.15
SCARNA2-201ENST00000458748 CIAPIN1Q6FI81 312 aa22.22■■□□□ 1.15
SCARNA2-201ENST00000458748 CCDC85AQ96PX6 553 aaPredicted RBP22.22■■□□□ 1.15
SCARNA2-201ENST00000458748 ANKIB1Q9P2G1 1089 aa22.22■■□□□ 1.15
SCARNA2-201ENST00000458748 POLLQ9UGP5 575 aa22.22■■□□□ 1.15
SCARNA2-201ENST00000458748 MKRN1Q9UHC7 482 aaKnown RBP22.22■■□□□ 1.15
SCARNA2-201ENST00000458748 PTPRCP08575 1304 aa22.22■■□□□ 1.15
SCARNA2-201ENST00000458748 PASKQ96RG2 1323 aa22.22■■□□□ 1.15
SCARNA2-201ENST00000458748 F6X3S4 739 aa22.21■■□□□ 1.15
SCARNA2-201ENST00000458748 BEND3Q5T5X7 828 aa22.21■■□□□ 1.15
SCARNA2-201ENST00000458748 TBC1D16Q8TBP0 767 aa22.21■■□□□ 1.15
SCARNA2-201ENST00000458748 ALDH1L1O75891 902 aa22.2■■□□□ 1.14
SCARNA2-201ENST00000458748 ITGBL1O95965 494 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms